RNA–Protein interactions for RNA: ENST00000394157.7

PSEN1-203, Transcript of presenilin 1, humanhuman

TSL 2 BASIC

Gene PSEN1, Length 1,249 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-203ENST00000394157 LINC00242Q5T6M2 205 aa12.84□□□□□ -0.35
PSEN1-203ENST00000394157 ZC2HC1BQ5TFG8 222 aa12.84□□□□□ -0.35
PSEN1-203ENST00000394157 FOXI1Q12951 378 aa12.83□□□□□ -0.36
PSEN1-203ENST00000394157 DNAH2Q9P225 4427 aa12.82□□□□□ -0.36
PSEN1-203ENST00000394157 HERVK_113P63121 156 aa12.82□□□□□ -0.36
PSEN1-203ENST00000394157 MAP1LC3CQ9BXW4 147 aa12.82□□□□□ -0.36
PSEN1-203ENST00000394157 RYR3Q15413 4870 aa12.82□□□□□ -0.36
PSEN1-203ENST00000394157 IGHV3OR16-9A0A0B4J2B5 98 aa12.81□□□□□ -0.36
PSEN1-203ENST00000394157 TINCRA0A1B0GVN0 87 aa12.81□□□□□ -0.36
PSEN1-203ENST00000394157 CFAP161Q6P656 301 aa12.81□□□□□ -0.36
PSEN1-203ENST00000394157 HIST3H2BBQ8N257 126 aa12.81□□□□□ -0.36
PSEN1-203ENST00000394157 MAPKAPK5-AS1Q8N8E1 139 aa12.81□□□□□ -0.36
PSEN1-203ENST00000394157 COX7A2LO14548 114 aa12.8□□□□□ -0.36
PSEN1-203ENST00000394157 S100A2P29034 98 aa12.8□□□□□ -0.36
PSEN1-203ENST00000394157 GEMIN7Q9H840 131 aaKnown RBP12.8□□□□□ -0.36
PSEN1-203ENST00000394157 A0A0J9YXV3 536 aa12.79□□□□□ -0.36
PSEN1-203ENST00000394157 LRCOL1A6NCL2 159 aa12.79□□□□□ -0.36
PSEN1-203ENST00000394157 EREGO14944 169 aa12.79□□□□□ -0.36
PSEN1-203ENST00000394157 IGLC3P0DOY3 106 aa12.79□□□□□ -0.36
PSEN1-203ENST00000394157 C14orf177Q52M58 125 aa12.79□□□□□ -0.36
PSEN1-203ENST00000394157 A0A087WTM6 91 aa12.78□□□□□ -0.36
PSEN1-203ENST00000394157 C5orf52A6NGY3 159 aa12.78□□□□□ -0.36
PSEN1-203ENST00000394157 SNRPEP62304 92 aaKnown RBP12.78□□□□□ -0.36
PSEN1-203ENST00000394157 SPATA12Q7Z6I5 190 aa12.78□□□□□ -0.36
PSEN1-203ENST00000394157 LINC01561Q8N1V8 128 aa12.78□□□□□ -0.36
PSEN1-203ENST00000394157 CHTOPQ9Y3Y2 248 aaKnown RBP12.78□□□□□ -0.36
PSEN1-203ENST00000394157 A0A087WZ39 114 aa12.77□□□□□ -0.37
PSEN1-203ENST00000394157 IGLV5-45A0A087WSX0 123 aa12.76□□□□□ -0.37
PSEN1-203ENST00000394157 IGHV1-58A0A0C4DH39 117 aa12.76□□□□□ -0.37
PSEN1-203ENST00000394157 USP17L23D6RBM5 183 aa12.76□□□□□ -0.37
PSEN1-203ENST00000394157 F8VRH5 84 aa12.76□□□□□ -0.37
PSEN1-203ENST00000394157 APOMO95445 188 aa12.76□□□□□ -0.37
PSEN1-203ENST00000394157 MALP21145 153 aa12.76□□□□□ -0.37
PSEN1-203ENST00000394157 COX6A2Q02221 97 aa12.76□□□□□ -0.37
PSEN1-203ENST00000394157 IGLV4-69A0A075B6H9 119 aa12.75□□□□□ -0.37
PSEN1-203ENST00000394157 SYS1-DBNDD2H3BUS1 97 aa12.75□□□□□ -0.37
PSEN1-203ENST00000394157 ODF1Q14990 250 aa12.75□□□□□ -0.37
PSEN1-203ENST00000394157 C5orf38Q86SI9 138 aa12.75□□□□□ -0.37
PSEN1-203ENST00000394157 FRAS1Q86XX4 4008 aa12.75□□□□□ -0.37
PSEN1-203ENST00000394157 HIST1H2BLQ99880 126 aa12.75□□□□□ -0.37
PSEN1-203ENST00000394157 CHAC1Q9BUX1 264 aa12.75□□□□□ -0.37
PSEN1-203ENST00000394157 DNAH10Q8IVF4 4471 aa12.74□□□□□ -0.37
PSEN1-203ENST00000394157 PET117Q6UWS5 81 aa12.74□□□□□ -0.37
PSEN1-203ENST00000394157 LINC00469Q8N7U9 141 aa12.74□□□□□ -0.37
PSEN1-203ENST00000394157 CDKN2A-AS1Q9UH64 79 aa12.74□□□□□ -0.37
PSEN1-203ENST00000394157 DNAH17Q9UFH2 4485 aa12.74□□□□□ -0.37
PSEN1-203ENST00000394157 H0Y8G0 127 aa12.73□□□□□ -0.37
PSEN1-203ENST00000394157 H3BRM9 83 aa12.73□□□□□ -0.37
PSEN1-203ENST00000394157 PLNP26678 52 aa12.73□□□□□ -0.37
PSEN1-203ENST00000394157 MRPL35Q9NZE8 188 aaKnown RBP12.73□□□□□ -0.37
PSEN1-203ENST00000394157 C3orf79P0CE67 100 aa12.72□□□□□ -0.37
PSEN1-203ENST00000394157 Q8N814 137 aa12.72□□□□□ -0.37
PSEN1-203ENST00000394157 C15orf56Q8N910 161 aa12.72□□□□□ -0.37
PSEN1-203ENST00000394157 OR10D4PQ8NGN7 298 aa12.72□□□□□ -0.37
PSEN1-203ENST00000394157 GVQW2A0A096LPI5 108 aaPredicted RBP12.71□□□□□ -0.37
PSEN1-203ENST00000394157 LECT2O14960 151 aa12.71□□□□□ -0.37
PSEN1-203ENST00000394157 WFDC2Q14508 124 aa12.71□□□□□ -0.37
PSEN1-203ENST00000394157 IGHV3-64A0A075B6Q5 118 aa12.7□□□□□ -0.38
PSEN1-203ENST00000394157 C11orf86A6NJI1 115 aa12.7□□□□□ -0.38
PSEN1-203ENST00000394157 AKR1D1P51857 326 aa12.7□□□□□ -0.38
PSEN1-203ENST00000394157 KRTDAPP60985 99 aa12.7□□□□□ -0.38
PSEN1-203ENST00000394157 LINC01545Q5VT33 79 aa12.7□□□□□ -0.38
PSEN1-203ENST00000394157 TMA7Q9Y2S6 64 aaKnown RBP12.7□□□□□ -0.38
PSEN1-203ENST00000394157 DPM2O94777 84 aa12.69□□□□□ -0.38
PSEN1-203ENST00000394157 ZNF22P17026 224 aaPredicted RBP12.69□□□□□ -0.38
PSEN1-203ENST00000394157 NTN5Q8WTR8 489 aaPredicted RBP12.69□□□□□ -0.38
PSEN1-203ENST00000394157 hDV102S1A0JD36 115 aa12.68□□□□□ -0.38
PSEN1-203ENST00000394157 C20orf202A1L168 122 aa12.68□□□□□ -0.38
PSEN1-203ENST00000394157 ZNF561-AS1K7EIQ3 104 aa12.68□□□□□ -0.38
PSEN1-203ENST00000394157 F8WDY8 70 aa12.67□□□□□ -0.38
PSEN1-203ENST00000394157 TMEM170BQ5T4T1 132 aa12.67□□□□□ -0.38
PSEN1-203ENST00000394157 ORAOV1Q8WV07 137 aa12.67□□□□□ -0.38
PSEN1-203ENST00000394157 FAT2Q9NYQ8 4349 aa12.66□□□□□ -0.38
PSEN1-203ENST00000394157 SMIM1B2RUZ4 78 aa12.66□□□□□ -0.38
PSEN1-203ENST00000394157 IGKCP01834 107 aa12.66□□□□□ -0.38
PSEN1-203ENST00000394157 CDPF1Q6NVV7 123 aa12.66□□□□□ -0.38
PSEN1-203ENST00000394157 A0A1B0GVY2 172 aa12.65□□□□□ -0.38
PSEN1-203ENST00000394157 SPAG11BQ08648 103 aa12.65□□□□□ -0.38
PSEN1-203ENST00000394157 HIGD2BQ4VC39 106 aa12.65□□□□□ -0.38
PSEN1-203ENST00000394157 C2orf48Q96LS8 159 aa12.65□□□□□ -0.38
PSEN1-203ENST00000394157 CNBPP62633 177 aaKnown RBP12.64□□□□□ -0.39
PSEN1-203ENST00000394157 Q8IZM0 81 aa12.64□□□□□ -0.39
PSEN1-203ENST00000394157 PMCHL2Q9BQD1 86 aa12.64□□□□□ -0.39
PSEN1-203ENST00000394157 SPINK8P0C7L1 97 aa12.63□□□□□ -0.39
PSEN1-203ENST00000394157 TRAV16A0A0A6YYK6 109 aaPredicted RBP12.62□□□□□ -0.39
PSEN1-203ENST00000394157 IGLV5-39A0A0G2JS06 123 aa12.62□□□□□ -0.39
PSEN1-203ENST00000394157 TMEM223A0PJW6 202 aa12.62□□□□□ -0.39
PSEN1-203ENST00000394157 PRSS2P07478 247 aa12.62□□□□□ -0.39
PSEN1-203ENST00000394157 KIAA0087Q14695 138 aa12.62□□□□□ -0.39
PSEN1-203ENST00000394157 IGLV2-33A0A075B6J2 118 aaPredicted RBP12.61□□□□□ -0.39
PSEN1-203ENST00000394157 IGLV5-52A0A0A0MRZ9 124 aa12.6□□□□□ -0.39
PSEN1-203ENST00000394157 CXCL5P42830 114 aa12.6□□□□□ -0.39
PSEN1-203ENST00000394157 HERVK_113P61574 105 aa12.6□□□□□ -0.39
PSEN1-203ENST00000394157 C6orf226Q5I0X4 101 aa12.6□□□□□ -0.39
PSEN1-203ENST00000394157 COX7B2Q8TF08 81 aa12.6□□□□□ -0.39
PSEN1-203ENST00000394157 KRTAP10-2P60368 255 aa12.59□□□□□ -0.39
PSEN1-203ENST00000394157 CAMK2N2Q96S95 79 aa12.59□□□□□ -0.39
PSEN1-203ENST00000394157 TOMM7Q9P0U1 55 aa12.59□□□□□ -0.39
PSEN1-203ENST00000394157 NDUFA1O15239 70 aa12.58□□□□□ -0.4
PSEN1-203ENST00000394157 SYCNQ0VAF6 134 aa12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 67.1 ms