RNA–Protein interactions for RNA: ENST00000380749.9

HMGN1-204, Transcript of high mobility group nucleosome binding domain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGN1, Length 1,383 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-204ENST00000380749 A0A1W2PNN7 141 aa10.65□□□□□ -0.71
HMGN1-204ENST00000380749 MT-ND6P03923 174 aa10.65□□□□□ -0.71
HMGN1-204ENST00000380749 RNF151Q2KHN1 245 aa10.65□□□□□ -0.71
HMGN1-204ENST00000380749 SMDT1Q9H4I9 107 aa10.65□□□□□ -0.71
HMGN1-204ENST00000380749 IFITM10A6NMD0 228 aa10.64□□□□□ -0.71
HMGN1-204ENST00000380749 C9JQL5 133 aa10.64□□□□□ -0.71
HMGN1-204ENST00000380749 F8WDY8 70 aa10.64□□□□□ -0.71
HMGN1-204ENST00000380749 MRPS36P82909 103 aaKnown RBP10.64□□□□□ -0.71
HMGN1-204ENST00000380749 RNF213Q63HN8 5207 aa10.63□□□□□ -0.71
HMGN1-204ENST00000380749 A0A1B0GVG6 124 aa10.63□□□□□ -0.71
HMGN1-204ENST00000380749 NDUFA1O15239 70 aa10.63□□□□□ -0.71
HMGN1-204ENST00000380749 NPYP01303 97 aa10.63□□□□□ -0.71
HMGN1-204ENST00000380749 PPBPP02775 128 aa10.63□□□□□ -0.71
HMGN1-204ENST00000380749 KRTAP10-8P60410 259 aa10.63□□□□□ -0.71
HMGN1-204ENST00000380749 IMMP2LQ96T52 175 aa10.63□□□□□ -0.71
HMGN1-204ENST00000380749 OPRPNQ99935 248 aaPredicted RBP10.63□□□□□ -0.71
HMGN1-204ENST00000380749 MRPL35Q9NZE8 188 aaKnown RBP10.63□□□□□ -0.71
HMGN1-204ENST00000380749 PSORS1C2Q9UIG4 136 aa10.63□□□□□ -0.71
HMGN1-204ENST00000380749 IGHV3OR16-9A0A0B4J2B5 98 aa10.62□□□□□ -0.71
HMGN1-204ENST00000380749 A0A1B0GXF2 115 aa10.62□□□□□ -0.71
HMGN1-204ENST00000380749 SRSF3P84103 164 aaKnown RBP10.62□□□□□ -0.71
HMGN1-204ENST00000380749 ODF1Q14990 250 aa10.62□□□□□ -0.71
HMGN1-204ENST00000380749 TGIF2-C20orf24A0A0A6YYL0 155 aa10.61□□□□□ -0.71
HMGN1-204ENST00000380749 RAB5AP20339 215 aa10.6□□□□□ -0.71
HMGN1-204ENST00000380749 IFI27P40305 119 aaPredicted RBP10.6□□□□□ -0.71
HMGN1-204ENST00000380749 C1orf137Q5JT78 98 aa10.6□□□□□ -0.71
HMGN1-204ENST00000380749 PHF5AQ7RTV0 110 aaKnown RBP10.6□□□□□ -0.71
HMGN1-204ENST00000380749 ATP5L2Q7Z4Y8 100 aa10.6□□□□□ -0.71
HMGN1-204ENST00000380749 ORMDL3Q8N138 153 aa10.6□□□□□ -0.71
HMGN1-204ENST00000380749 FAM104AQ969W3 186 aa10.6□□□□□ -0.71
HMGN1-204ENST00000380749 PRELID3AQ96N28 172 aa10.57□□□□□ -0.72
HMGN1-204ENST00000380749 TLX1NBP0CAT3 122 aa10.56□□□□□ -0.72
HMGN1-204ENST00000380749 TMEM136Q6ZRR5 245 aa10.56□□□□□ -0.72
HMGN1-204ENST00000380749 A0A087WZ39 114 aa10.55□□□□□ -0.72
HMGN1-204ENST00000380749 C10orf25Q5T742 122 aa10.55□□□□□ -0.72
HMGN1-204ENST00000380749 TMEM141Q96I45 108 aa10.55□□□□□ -0.72
HMGN1-204ENST00000380749 C6orf48Q9UBA6 75 aa10.55□□□□□ -0.72
HMGN1-204ENST00000380749 PYGO1Q9Y3Y4 419 aa10.55□□□□□ -0.72
HMGN1-204ENST00000380749 UNQ6190/PRO20217Q6UXQ8 127 aa10.54□□□□□ -0.72
HMGN1-204ENST00000380749 FAM19A5Q7Z5A7 132 aaPredicted RBP10.54□□□□□ -0.72
HMGN1-204ENST00000380749 DIRC1Q969H9 104 aa10.54□□□□□ -0.72
HMGN1-204ENST00000380749 LAMTOR2Q9Y2Q5 125 aa10.54□□□□□ -0.72
HMGN1-204ENST00000380749 IGLV4-3A0A075B6K6 122 aa10.53□□□□□ -0.72
HMGN1-204ENST00000380749 GAGE2EQ4V326 116 aa10.53□□□□□ -0.72
HMGN1-204ENST00000380749 C2orf88Q9BSF0 95 aa10.53□□□□□ -0.72
HMGN1-204ENST00000380749 MAP1LC3AQ9H492 121 aa10.53□□□□□ -0.72
HMGN1-204ENST00000380749 GAGE2DQ9UEU5 116 aa10.53□□□□□ -0.72
HMGN1-204ENST00000380749 FAM168BA1KXE4 195 aa10.52□□□□□ -0.72
HMGN1-204ENST00000380749 IGLV7-43P04211 117 aa10.52□□□□□ -0.72
HMGN1-204ENST00000380749 LINC00242Q5T6M2 205 aa10.52□□□□□ -0.72
HMGN1-204ENST00000380749 TEX43Q6ZNM6 134 aa10.52□□□□□ -0.72
HMGN1-204ENST00000380749 LPAP08519 4548 aa10.52□□□□□ -0.73
HMGN1-204ENST00000380749 TRBV30A0A0K0K1B3 111 aa10.52□□□□□ -0.73
HMGN1-204ENST00000380749 Q6ZN92 141 aa10.52□□□□□ -0.73
HMGN1-204ENST00000380749 LOC389332A0A1B0GUA5 103 aa10.51□□□□□ -0.73
HMGN1-204ENST00000380749 PACRGQ96M98 296 aaPredicted RBP10.51□□□□□ -0.73
HMGN1-204ENST00000380749 CYSLTR1Q9Y271 337 aa10.51□□□□□ -0.73
HMGN1-204ENST00000380749 M0QXV9 152 aa10.5□□□□□ -0.73
HMGN1-204ENST00000380749 UBE2BP63146 152 aa10.5□□□□□ -0.73
HMGN1-204ENST00000380749 PNRC1Q12796 327 aaPredicted RBP10.5□□□□□ -0.73
HMGN1-204ENST00000380749 KIAA0087Q14695 138 aa10.5□□□□□ -0.73
HMGN1-204ENST00000380749 LINC01561Q8N1V8 128 aa10.5□□□□□ -0.73
HMGN1-204ENST00000380749 PRSS47A8MTI9 375 aa10.49□□□□□ -0.73
HMGN1-204ENST00000380749 NDUFC2-KCTD14E9PQ53 114 aa10.49□□□□□ -0.73
HMGN1-204ENST00000380749 H0Y9J4 135 aa10.49□□□□□ -0.73
HMGN1-204ENST00000380749 UBE2D1P51668 147 aa10.49□□□□□ -0.73
HMGN1-204ENST00000380749 MT-ND4LP03901 98 aa10.48□□□□□ -0.73
HMGN1-204ENST00000380749 C2orf82Q6UX34 121 aa10.48□□□□□ -0.73
HMGN1-204ENST00000380749 C2orf66Q6UXQ4 117 aa10.48□□□□□ -0.73
HMGN1-204ENST00000380749 Q8N8P6 123 aa10.48□□□□□ -0.73
HMGN1-204ENST00000380749 PRSS2P07478 247 aa10.47□□□□□ -0.73
HMGN1-204ENST00000380749 ORMDL2Q53FV1 153 aa10.47□□□□□ -0.73
HMGN1-204ENST00000380749 ANAPC16Q96DE5 110 aa10.47□□□□□ -0.73
HMGN1-204ENST00000380749 K7EMI3 77 aa10.46□□□□□ -0.74
HMGN1-204ENST00000380749 NPSP0C0P6 89 aa10.46□□□□□ -0.74
HMGN1-204ENST00000380749 KRTAP11-1Q8IUC1 163 aa10.46□□□□□ -0.74
HMGN1-204ENST00000380749 VCX2Q9H322 139 aa10.46□□□□□ -0.74
HMGN1-204ENST00000380749 PRR26Q8N8Z3 221 aa10.45□□□□□ -0.74
HMGN1-204ENST00000380749 CKS1BP61024 79 aa10.44□□□□□ -0.74
HMGN1-204ENST00000380749 LINC00173Q6ZV60 143 aa10.44□□□□□ -0.74
HMGN1-204ENST00000380749 KRTAP7-1Q8IUC3 87 aa10.44□□□□□ -0.74
HMGN1-204ENST00000380749 AMELXQ99217 191 aa10.44□□□□□ -0.74
HMGN1-204ENST00000380749 TOMM7Q9P0U1 55 aa10.44□□□□□ -0.74
HMGN1-204ENST00000380749 IGLV1-50A0A075B6I6 118 aa10.43□□□□□ -0.74
HMGN1-204ENST00000380749 C9orf129Q5T035 196 aaKnown RBP10.43□□□□□ -0.74
HMGN1-204ENST00000380749 ZC2HC1BQ5TFG8 222 aa10.43□□□□□ -0.74
HMGN1-204ENST00000380749 NXT2Q9NPJ8 142 aaKnown RBP10.43□□□□□ -0.74
HMGN1-204ENST00000380749 PAPPA-AS1Q5QFB9 102 aa10.42□□□□□ -0.74
HMGN1-204ENST00000380749 Q8IZM0 81 aa10.42□□□□□ -0.74
HMGN1-204ENST00000380749 G0S2P27469 103 aa10.41□□□□□ -0.74
HMGN1-204ENST00000380749 RAB14P61106 215 aa10.41□□□□□ -0.74
HMGN1-204ENST00000380749 HERVK_113P63121 156 aa10.41□□□□□ -0.74
HMGN1-204ENST00000380749 SEC11AP67812 179 aa10.41□□□□□ -0.74
HMGN1-204ENST00000380749 C6orf226Q5I0X4 101 aa10.41□□□□□ -0.74
HMGN1-204ENST00000380749 CTDSP1Q9GZU7 261 aa10.41□□□□□ -0.74
HMGN1-204ENST00000380749 IGIPA6NJ69 53 aa10.4□□□□□ -0.74
HMGN1-204ENST00000380749 FAM19A3Q7Z5A8 133 aa10.4□□□□□ -0.74
HMGN1-204ENST00000380749 ALKBH7Q9BT30 221 aaPredicted RBP10.4□□□□□ -0.74
HMGN1-204ENST00000380749 GEMIN7Q9H840 131 aaKnown RBP10.39□□□□□ -0.75
HMGN1-204ENST00000380749 KRTAP1-4P0C5Y4 121 aa10.39□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 60.4 ms