RNA–Protein interactions for RNA: ENST00000380701.7

CCDC171-201, Transcript of coiled-coil domain containing 171, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC171, Length 6,512 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-201ENST00000380701 Q6ZQY7 126 aa5.19□□□□□ -1.58
CCDC171-201ENST00000380701 LST1O00453 97 aa5.19□□□□□ -1.58
CCDC171-201ENST00000380701 MYO18BQ8IUG5 2567 aa5.19□□□□□ -1.58
CCDC171-201ENST00000380701 KRTAP10-9P60411 292 aa5.19□□□□□ -1.58
CCDC171-201ENST00000380701 NCOR2Q9Y618 2525 aa5.19□□□□□ -1.58
CCDC171-201ENST00000380701 TTTY13Q9BZ97 58 aa5.18□□□□□ -1.58
CCDC171-201ENST00000380701 REG3GQ6UW15 175 aa5.18□□□□□ -1.58
CCDC171-201ENST00000380701 A0A096LNI7 61 aa5.18□□□□□ -1.58
CCDC171-201ENST00000380701 WFDC2Q14508 124 aa5.18□□□□□ -1.58
CCDC171-201ENST00000380701 FAM19A3Q7Z5A8 133 aa5.17□□□□□ -1.58
CCDC171-201ENST00000380701 C1orf158Q8N1D5 194 aa5.17□□□□□ -1.58
CCDC171-201ENST00000380701 RNASE8Q8TDE3 154 aaKnown RBP5.17□□□□□ -1.58
CCDC171-201ENST00000380701 WNK1Q9H4A3 2382 aa5.17□□□□□ -1.58
CCDC171-201ENST00000380701 UQCRQO14949 82 aa5.17□□□□□ -1.58
CCDC171-201ENST00000380701 TEX49A0A1B0GTD5 131 aa5.17□□□□□ -1.58
CCDC171-201ENST00000380701 FHL2Q14192 279 aa5.17□□□□□ -1.58
CCDC171-201ENST00000380701 C18orf65Q6ZTR6 163 aa5.17□□□□□ -1.58
CCDC171-201ENST00000380701 IGKV2-28A0A075B6P5 120 aa5.17□□□□□ -1.58
CCDC171-201ENST00000380701 NDUFC2-KCTD14E9PQ53 114 aa5.17□□□□□ -1.58
CCDC171-201ENST00000380701 MRPS12O15235 138 aaKnown RBP5.17□□□□□ -1.58
CCDC171-201ENST00000380701 IGKV2D-28P01615 120 aa5.17□□□□□ -1.58
CCDC171-201ENST00000380701 FREM1Q5H8C1 2179 aa5.16□□□□□ -1.58
CCDC171-201ENST00000380701 WFDC10AQ9H1F0 79 aa5.16□□□□□ -1.58
CCDC171-201ENST00000380701 NDUFV3P56181 108 aaKnown RBP5.16□□□□□ -1.58
CCDC171-201ENST00000380701 PRR9Q5T870 116 aa5.16□□□□□ -1.58
CCDC171-201ENST00000380701 CCDC168Q8NDH2 2452 aa5.16□□□□□ -1.58
CCDC171-201ENST00000380701 TRIAP1O43715 76 aa5.16□□□□□ -1.58
CCDC171-201ENST00000380701 CDSNQ15517 529 aa5.16□□□□□ -1.58
CCDC171-201ENST00000380701 Q6ZTC4 211 aa5.16□□□□□ -1.58
CCDC171-201ENST00000380701 C3orf22Q8N5N4 141 aa5.16□□□□□ -1.58
CCDC171-201ENST00000380701 Q6ZS46 218 aa5.15□□□□□ -1.58
CCDC171-201ENST00000380701 RPL37AP8A6NKH3 93 aa5.15□□□□□ -1.58
CCDC171-201ENST00000380701 LINC00242Q5T6M2 205 aa5.15□□□□□ -1.58
CCDC171-201ENST00000380701 C11orf21Q9P2W6 132 aa5.15□□□□□ -1.58
CCDC171-201ENST00000380701 IGIPA6NJ69 53 aa5.15□□□□□ -1.59
CCDC171-201ENST00000380701 SPINK6Q6UWN8 80 aa5.15□□□□□ -1.59
CCDC171-201ENST00000380701 LOC100131303A0A0U1RQF7 123 aa5.14□□□□□ -1.59
CCDC171-201ENST00000380701 HIVEP3Q5T1R4 2406 aa5.14□□□□□ -1.59
CCDC171-201ENST00000380701 POM121L12Q8N7R1 296 aa5.14□□□□□ -1.59
CCDC171-201ENST00000380701 SORL1Q92673 2214 aa5.14□□□□□ -1.59
CCDC171-201ENST00000380701 LYPD5Q6UWN5 251 aa5.14□□□□□ -1.59
CCDC171-201ENST00000380701 LINC01556Q5JQF7 62 aa5.14□□□□□ -1.59
CCDC171-201ENST00000380701 PPDPFQ9H3Y8 114 aa5.14□□□□□ -1.59
CCDC171-201ENST00000380701 A0A1B0GW54 56 aa5.13□□□□□ -1.59
CCDC171-201ENST00000380701 SMR3AQ99954 134 aa5.13□□□□□ -1.59
CCDC171-201ENST00000380701 FAM236DA0A1B0GTK5 79 aa5.13□□□□□ -1.59
CCDC171-201ENST00000380701 FAM236CP0DP71 79 aa5.13□□□□□ -1.59
CCDC171-201ENST00000380701 SMIM1B2RUZ4 78 aa5.13□□□□□ -1.59
CCDC171-201ENST00000380701 WFDC10BQ8IUB3 73 aa5.13□□□□□ -1.59
CCDC171-201ENST00000380701 SMIM11BQ8TCY0 68 aa5.13□□□□□ -1.59
CCDC171-201ENST00000380701 FAM240AA0A1B0GVK7 77 aa5.13□□□□□ -1.59
CCDC171-201ENST00000380701 IGLV9-49A0A0B4J1Y8 123 aa5.13□□□□□ -1.59
CCDC171-201ENST00000380701 NTM-AS1Q6ZSK4 140 aa5.13□□□□□ -1.59
CCDC171-201ENST00000380701 C6orf223Q8N319 242 aa5.13□□□□□ -1.59
CCDC171-201ENST00000380701 AMELXQ99217 191 aa5.13□□□□□ -1.59
CCDC171-201ENST00000380701 MED12LQ86YW9 2145 aa5.12□□□□□ -1.59
CCDC171-201ENST00000380701 C1orf137Q5JT78 98 aa5.12□□□□□ -1.59
CCDC171-201ENST00000380701 ENHOQ6UWT2 76 aa5.12□□□□□ -1.59
CCDC171-201ENST00000380701 UNQ6190/PRO20217Q6UXQ8 127 aa5.12□□□□□ -1.59
CCDC171-201ENST00000380701 LRP4O75096 1905 aa5.12□□□□□ -1.59
CCDC171-201ENST00000380701 NCOA6Q14686 2063 aaPredicted RBP5.12□□□□□ -1.59
CCDC171-201ENST00000380701 ADAMTS20P59510 1910 aa5.11□□□□□ -1.59
CCDC171-201ENST00000380701 SERP2Q8N6R1 65 aa5.11□□□□□ -1.59
CCDC171-201ENST00000380701 A0A1W2PPR1 153 aa5.11□□□□□ -1.59
CCDC171-201ENST00000380701 C20orf197Q8N268 126 aa5.11□□□□□ -1.59
CCDC171-201ENST00000380701 TNRC6BQ9UPQ9 1833 aaKnown RBP5.11□□□□□ -1.59
CCDC171-201ENST00000380701 PRB2P02812 416 aaPredicted RBP5.11□□□□□ -1.59
CCDC171-201ENST00000380701 RETNQ9HD89 108 aa5.11□□□□□ -1.59
CCDC171-201ENST00000380701 FAM229AH3BQW9 127 aa5.1□□□□□ -1.59
CCDC171-201ENST00000380701 C3orf84H3BNL1 204 aa5.1□□□□□ -1.59
CCDC171-201ENST00000380701 SLPIP03973 132 aa5.1□□□□□ -1.59
CCDC171-201ENST00000380701 Q6ZVQ6 151 aa5.1□□□□□ -1.59
CCDC171-201ENST00000380701 TRBV10-3A0A0K0K1G6 114 aa5.1□□□□□ -1.59
CCDC171-201ENST00000380701 MAPKAPK5-AS1Q8N8E1 139 aa5.1□□□□□ -1.59
CCDC171-201ENST00000380701 WWC2-AS2Q96NR7 200 aa5.09□□□□□ -1.59
CCDC171-201ENST00000380701 ARHGAP21Q5T5U3 1957 aa5.09□□□□□ -1.59
CCDC171-201ENST00000380701 Q8N814 137 aa5.09□□□□□ -1.59
CCDC171-201ENST00000380701 WFDC13Q8IUB5 93 aa5.09□□□□□ -1.59
CCDC171-201ENST00000380701 LINC00337Q8N6G1 96 aa5.09□□□□□ -1.59
CCDC171-201ENST00000380701 PCDH15Q96QU1 1955 aa5.09□□□□□ -1.6
CCDC171-201ENST00000380701 IGF2RP11717 2491 aa5.08□□□□□ -1.6
CCDC171-201ENST00000380701 Q9BRP9 147 aa5.08□□□□□ -1.6
CCDC171-201ENST00000380701 SDIM1Q6ZPB5 146 aa5.08□□□□□ -1.6
CCDC171-201ENST00000380701 CIRBP-AS1Q8TBR5 109 aa5.08□□□□□ -1.6
CCDC171-201ENST00000380701 BRK1Q8WUW1 75 aa5.08□□□□□ -1.6
CCDC171-201ENST00000380701 PRRC2AP48634 2157 aaKnown RBP5.08□□□□□ -1.6
CCDC171-201ENST00000380701 TRBV7-6A0A0J9YX20 115 aa5.07□□□□□ -1.6
CCDC171-201ENST00000380701 LINC00526Q96FQ7 95 aa5.07□□□□□ -1.6
CCDC171-201ENST00000380701 YPEL4Q96NS1 127 aa5.07□□□□□ -1.6
CCDC171-201ENST00000380701 MDFIQ99750 246 aa5.07□□□□□ -1.6
CCDC171-201ENST00000380701 KIF25-AS1Q9Y6Z4 181 aa5.07□□□□□ -1.6
CCDC171-201ENST00000380701 CEP192Q8TEP8 1941 aa5.07□□□□□ -1.6
CCDC171-201ENST00000380701 EDN2P20800 178 aa5.07□□□□□ -1.6
CCDC171-201ENST00000380701 COX6A2Q02221 97 aa5.06□□□□□ -1.6
CCDC171-201ENST00000380701 Q6Q795 121 aa5.06□□□□□ -1.6
CCDC171-201ENST00000380701 PRR14LQ5THK1 2151 aa5.06□□□□□ -1.6
CCDC171-201ENST00000380701 IGLV4-60A0A075B6I1 120 aa5.06□□□□□ -1.6
CCDC171-201ENST00000380701 SCXQ7RTU7 201 aa5.06□□□□□ -1.6
CCDC171-201ENST00000380701 ESRGQ1W209 222 aa5.06□□□□□ -1.6
CCDC171-201ENST00000380701 TRAV7A0A075B6U4 112 aa5.06□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 6.9 ms