RNA–Protein interactions for RNA: ENST00000379215.8

ECHDC3-201, Transcript of enoyl-CoA hydratase domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ECHDC3, Length 1,649 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC3-201ENST00000379215 UBE2DNLQ8IWF7 75 aa16.66■□□□□ 0.26
ECHDC3-201ENST00000379215 PLEKHB2Q96CS7 222 aa16.66■□□□□ 0.26
ECHDC3-201ENST00000379215 IGKV2D-26A0A0A0MRZ7 120 aa16.65■□□□□ 0.26
ECHDC3-201ENST00000379215 IGHV1-58A0A0C4DH39 117 aa16.65■□□□□ 0.26
ECHDC3-201ENST00000379215 K7EP13 123 aa16.65■□□□□ 0.26
ECHDC3-201ENST00000379215 DLEU1O43261 78 aa16.65■□□□□ 0.26
ECHDC3-201ENST00000379215 MIAQ16674 131 aa16.65■□□□□ 0.26
ECHDC3-201ENST00000379215 IGHV3OR16-9A0A0B4J2B5 98 aa16.64■□□□□ 0.25
ECHDC3-201ENST00000379215 LEPROTO15243 131 aa16.64■□□□□ 0.25
ECHDC3-201ENST00000379215 CD164L2Q6UWJ8 174 aa16.64■□□□□ 0.25
ECHDC3-201ENST00000379215 C10orf126Q8N4M7 172 aa16.64■□□□□ 0.25
ECHDC3-201ENST00000379215 MUC7Q8TAX7 377 aa16.63■□□□□ 0.25
ECHDC3-201ENST00000379215 UBE2WQ96B02 151 aa16.63■□□□□ 0.25
ECHDC3-201ENST00000379215 WWC2-AS2Q96NR7 200 aa16.63■□□□□ 0.25
ECHDC3-201ENST00000379215 DYNC2H1Q8NCM8 4307 aaKnown RBP16.63■□□□□ 0.25
ECHDC3-201ENST00000379215 XCL1P47992 114 aa16.63■□□□□ 0.25
ECHDC3-201ENST00000379215 ENHOQ6UWT2 76 aa16.63■□□□□ 0.25
ECHDC3-201ENST00000379215 BOD1L2Q8IYS8 172 aa16.63■□□□□ 0.25
ECHDC3-201ENST00000379215 LINC01561Q8N1V8 128 aa16.63■□□□□ 0.25
ECHDC3-201ENST00000379215 CHCHD10Q8WYQ3 142 aaPredicted RBP16.63■□□□□ 0.25
ECHDC3-201ENST00000379215 SPINK8P0C7L1 97 aa16.62■□□□□ 0.25
ECHDC3-201ENST00000379215 A0A087WZ39 114 aa16.61■□□□□ 0.25
ECHDC3-201ENST00000379215 PCP4L1A6NKN8 68 aa16.61■□□□□ 0.25
ECHDC3-201ENST00000379215 LGALS3P17931 250 aaKnown RBP16.61■□□□□ 0.25
ECHDC3-201ENST00000379215 J3QQQ9 107 aa16.6■□□□□ 0.25
ECHDC3-201ENST00000379215 DDTP30046 118 aa16.6■□□□□ 0.25
ECHDC3-201ENST00000379215 PCP2Q8IVA1 136 aa16.6■□□□□ 0.25
ECHDC3-201ENST00000379215 Q9H8V8 135 aa16.6■□□□□ 0.25
ECHDC3-201ENST00000379215 IGLV5-39A0A0G2JS06 123 aa16.59■□□□□ 0.25
ECHDC3-201ENST00000379215 SMIM1B2RUZ4 78 aa16.59■□□□□ 0.25
ECHDC3-201ENST00000379215 ZFAND6Q6FIF0 208 aa16.58■□□□□ 0.24
ECHDC3-201ENST00000379215 DNAH7Q8WXX0 4024 aa16.58■□□□□ 0.24
ECHDC3-201ENST00000379215 IGLV10-54A0A075B6I4 117 aa16.57■□□□□ 0.24
ECHDC3-201ENST00000379215 IGHV3-64A0A075B6Q5 118 aa16.57■□□□□ 0.24
ECHDC3-201ENST00000379215 TRAV8-3A0A0A6YYJ7 113 aa16.57■□□□□ 0.24
ECHDC3-201ENST00000379215 COX7A2LO14548 114 aa16.57■□□□□ 0.24
ECHDC3-201ENST00000379215 MYMXA0A1B0GTQ4 84 aa16.56■□□□□ 0.24
ECHDC3-201ENST00000379215 HNRNPA3P51991 378 aaKnown RBP16.56■□□□□ 0.24
ECHDC3-201ENST00000379215 IBA57-AS1B1ANH7 110 aa16.56■□□□□ 0.24
ECHDC3-201ENST00000379215 ZNF815PA8K554 130 aa16.55■□□□□ 0.24
ECHDC3-201ENST00000379215 C5orf38Q86SI9 138 aa16.55■□□□□ 0.24
ECHDC3-201ENST00000379215 FOXI1Q12951 378 aa16.54■□□□□ 0.24
ECHDC3-201ENST00000379215 C1orf43Q9BWL3 253 aa16.54■□□□□ 0.24
ECHDC3-201ENST00000379215 GAGE12HA6NDE8 117 aa16.53■□□□□ 0.24
ECHDC3-201ENST00000379215 TSPEAR-AS2P59090 65 aa16.53■□□□□ 0.24
ECHDC3-201ENST00000379215 RMI2Q96E14 147 aa16.53■□□□□ 0.24
ECHDC3-201ENST00000379215 MALP21145 153 aa16.52■□□□□ 0.24
ECHDC3-201ENST00000379215 MAPKAPK5-AS1Q8N8E1 139 aa16.52■□□□□ 0.23
ECHDC3-201ENST00000379215 TTTY13Q9BZ97 58 aa16.52■□□□□ 0.23
ECHDC3-201ENST00000379215 APOMO95445 188 aa16.51■□□□□ 0.23
ECHDC3-201ENST00000379215 HIGD1BQ9P298 99 aa16.5■□□□□ 0.23
ECHDC3-201ENST00000379215 SFTA2Q6UW10 78 aa16.49■□□□□ 0.23
ECHDC3-201ENST00000379215 NDUFA12Q9UI09 145 aa16.49■□□□□ 0.23
ECHDC3-201ENST00000379215 TTC32Q5I0X7 151 aa16.48■□□□□ 0.23
ECHDC3-201ENST00000379215 SCGB1D4Q6XE38 83 aa16.48■□□□□ 0.23
ECHDC3-201ENST00000379215 COX7B2Q8TF08 81 aa16.48■□□□□ 0.23
ECHDC3-201ENST00000379215 TP73-AS1Q9UF72 201 aa16.48■□□□□ 0.23
ECHDC3-201ENST00000379215 IGKV2D-24A0A075B6R9 120 aa16.47■□□□□ 0.23
ECHDC3-201ENST00000379215 NDUFA1O15239 70 aa16.47■□□□□ 0.23
ECHDC3-201ENST00000379215 C2orf91Q6ZV80 131 aa16.47■□□□□ 0.23
ECHDC3-201ENST00000379215 COX11Q9Y6N1 276 aa16.47■□□□□ 0.23
ECHDC3-201ENST00000379215 C3orf84H3BNL1 204 aa16.46■□□□□ 0.23
ECHDC3-201ENST00000379215 PRSS2P07478 247 aa16.46■□□□□ 0.23
ECHDC3-201ENST00000379215 CSMD3Q7Z407 3707 aa16.45■□□□□ 0.22
ECHDC3-201ENST00000379215 Q8IZM0 81 aa16.45■□□□□ 0.22
ECHDC3-201ENST00000379215 Q9HAA7 133 aa16.45■□□□□ 0.22
ECHDC3-201ENST00000379215 TOMM7Q9P0U1 55 aa16.45■□□□□ 0.22
ECHDC3-201ENST00000379215 KRTAP26-1Q6PEX3 210 aa16.44■□□□□ 0.22
ECHDC3-201ENST00000379215 ORAOV1Q8WV07 137 aa16.44■□□□□ 0.22
ECHDC3-201ENST00000379215 HERV-K104P63124 156 aa16.43■□□□□ 0.22
ECHDC3-201ENST00000379215 CXCL5P42830 114 aa16.42■□□□□ 0.22
ECHDC3-201ENST00000379215 CTAG1AP78358 180 aa16.42■□□□□ 0.22
ECHDC3-201ENST00000379215 C6orf226Q5I0X4 101 aa16.41■□□□□ 0.22
ECHDC3-201ENST00000379215 CASC10Q5T4H9 136 aa16.41■□□□□ 0.22
ECHDC3-201ENST00000379215 CFAP161Q6P656 301 aa16.41■□□□□ 0.22
ECHDC3-201ENST00000379215 ZNF625Q96I27 306 aaPredicted RBP16.41■□□□□ 0.22
ECHDC3-201ENST00000379215 TM2D2Q9BX73 214 aa16.41■□□□□ 0.22
ECHDC3-201ENST00000379215 PLECQ15149 4684 aaKnown RBP16.4■□□□□ 0.22
ECHDC3-201ENST00000379215 STARD9Q9P2P6 4700 aa16.4■□□□□ 0.22
ECHDC3-201ENST00000379215 A0A0J9YXY3 114 aa16.39■□□□□ 0.21
ECHDC3-201ENST00000379215 LINC00587B1AMM8 73 aa16.39■□□□□ 0.21
ECHDC3-201ENST00000379215 NBDYA0A0U1RRE5 68 aa16.38■□□□□ 0.21
ECHDC3-201ENST00000379215 HSD52Q0P140 79 aa16.38■□□□□ 0.21
ECHDC3-201ENST00000379215 TMEM238C9JI98 176 aa16.37■□□□□ 0.21
ECHDC3-201ENST00000379215 SPAG11BQ08648 103 aa16.37■□□□□ 0.21
ECHDC3-201ENST00000379215 TAL2Q16559 108 aa16.37■□□□□ 0.21
ECHDC3-201ENST00000379215 TIMM17BO60830 172 aa16.37■□□□□ 0.21
ECHDC3-201ENST00000379215 CKS1BP61024 79 aa16.37■□□□□ 0.21
ECHDC3-201ENST00000379215 CIRBPQ14011 172 aaKnown RBP16.37■□□□□ 0.21
ECHDC3-201ENST00000379215 M0R143 59 aa16.36■□□□□ 0.21
ECHDC3-201ENST00000379215 KRTAP1-5Q9BYS1 174 aa16.36■□□□□ 0.21
ECHDC3-201ENST00000379215 SPANXB1Q9NS25 103 aaPredicted RBP16.36■□□□□ 0.21
ECHDC3-201ENST00000379215 KIAA0087Q14695 138 aa16.35■□□□□ 0.21
ECHDC3-201ENST00000379215 HIST1H4GQ99525 98 aa16.34■□□□□ 0.21
ECHDC3-201ENST00000379215 TGP01266 2768 aa16.33■□□□□ 0.21
ECHDC3-201ENST00000379215 ZNF561-AS1K7EIQ3 104 aa16.32■□□□□ 0.2
ECHDC3-201ENST00000379215 SRSF9Q13242 221 aaKnown RBP eCLIP16.32■□□□□ 0.2
ECHDC3-201ENST00000379215 Q6ZVH6 145 aa16.32■□□□□ 0.2
ECHDC3-201ENST00000379215 F8WDY8 70 aa16.31■□□□□ 0.2
ECHDC3-201ENST00000379215 MEIG1Q5JSS6 88 aa16.31■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms