RNA–Protein interactions for RNA: ENST00000376957.6

SRM-201, Transcript of spermidine synthase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRM, Length 1,266 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRM-201ENST00000376957 NPSP0C0P6 89 aa14.14□□□□□ -0.15
SRM-201ENST00000376957 PRSS3P2Q8NHM4 247 aa14.14□□□□□ -0.15
SRM-201ENST00000376957 OPRPNQ99935 248 aaPredicted RBP14.14□□□□□ -0.15
SRM-201ENST00000376957 KIAA1644Q3SXP7 199 aa14.13□□□□□ -0.15
SRM-201ENST00000376957 SPACA4Q8TDM5 124 aa14.13□□□□□ -0.15
SRM-201ENST00000376957 CAMK2N2Q96S95 79 aa14.13□□□□□ -0.15
SRM-201ENST00000376957 IGLV4-69A0A075B6H9 119 aa14.12□□□□□ -0.15
SRM-201ENST00000376957 LINC01549A6NIU2 74 aa14.12□□□□□ -0.15
SRM-201ENST00000376957 OR10D4PQ8NGN7 298 aa14.12□□□□□ -0.15
SRM-201ENST00000376957 VCX2Q9H322 139 aa14.12□□□□□ -0.15
SRM-201ENST00000376957 IGLV4-3A0A075B6K6 122 aa14.11□□□□□ -0.15
SRM-201ENST00000376957 SNAPINO95295 136 aa14.11□□□□□ -0.15
SRM-201ENST00000376957 RPL37AP61513 92 aaKnown RBP14.11□□□□□ -0.15
SRM-201ENST00000376957 MAJINQ3KP22 176 aa14.11□□□□□ -0.15
SRM-201ENST00000376957 SVBPQ8N300 66 aa14.11□□□□□ -0.15
SRM-201ENST00000376957 LINC00526Q96FQ7 95 aa14.11□□□□□ -0.15
SRM-201ENST00000376957 C2orf48Q96LS8 159 aa14.11□□□□□ -0.15
SRM-201ENST00000376957 A0A087WYN8 130 aa14.1□□□□□ -0.15
SRM-201ENST00000376957 IGKV2-24A0A0C4DH68 120 aa14.1□□□□□ -0.15
SRM-201ENST00000376957 F8WDY8 70 aa14.1□□□□□ -0.15
SRM-201ENST00000376957 APOC3P02656 99 aa14.1□□□□□ -0.15
SRM-201ENST00000376957 SPAG11BQ08648 103 aa14.1□□□□□ -0.15
SRM-201ENST00000376957 IGHV3OR16-9A0A0B4J2B5 98 aa14.09□□□□□ -0.15
SRM-201ENST00000376957 PANO1I0J062 215 aa14.09□□□□□ -0.15
SRM-201ENST00000376957 CHTF8P0CG12 524 aa14.09□□□□□ -0.15
SRM-201ENST00000376957 FABP9Q0Z7S8 132 aa14.09□□□□□ -0.15
SRM-201ENST00000376957 C7orf33Q8WU49 177 aa14.08□□□□□ -0.16
SRM-201ENST00000376957 ORAOV1Q8WV07 137 aa14.08□□□□□ -0.16
SRM-201ENST00000376957 FAM104AQ969W3 186 aa14.08□□□□□ -0.16
SRM-201ENST00000376957 SEC11AP67812 179 aa14.07□□□□□ -0.16
SRM-201ENST00000376957 MRPL18Q9H0U6 180 aaKnown RBP14.07□□□□□ -0.16
SRM-201ENST00000376957 SRRM2Q9UQ35 2752 aaKnown RBP14.07□□□□□ -0.16
SRM-201ENST00000376957 LOC107984640A0A0U1RRK4 108 aa14.06□□□□□ -0.16
SRM-201ENST00000376957 ALKBH7Q9BT30 221 aaPredicted RBP14.06□□□□□ -0.16
SRM-201ENST00000376957 SMCO4Q9NRQ5 59 aa14.06□□□□□ -0.16
SRM-201ENST00000376957 PLAC8Q9NZF1 115 aa14.06□□□□□ -0.16
SRM-201ENST00000376957 LINC00242Q5T6M2 205 aa14.05□□□□□ -0.16
SRM-201ENST00000376957 STPG4Q8N801 248 aa14.05□□□□□ -0.16
SRM-201ENST00000376957 TOMM6Q96B49 74 aa14.05□□□□□ -0.16
SRM-201ENST00000376957 TIMM17AQ99595 171 aa14.05□□□□□ -0.16
SRM-201ENST00000376957 A0A087WZ39 114 aa14.04□□□□□ -0.16
SRM-201ENST00000376957 A0A096LNI7 61 aa14.04□□□□□ -0.16
SRM-201ENST00000376957 Q6ZRU5 148 aa14.04□□□□□ -0.16
SRM-201ENST00000376957 FA2HQ7L5A8 372 aa14.04□□□□□ -0.16
SRM-201ENST00000376957 IGIPA6NJ69 53 aa14.03□□□□□ -0.16
SRM-201ENST00000376957 NDUFA1O15239 70 aa14.03□□□□□ -0.16
SRM-201ENST00000376957 UBE2D1P51668 147 aa14.03□□□□□ -0.16
SRM-201ENST00000376957 RNF151Q2KHN1 245 aa14.03□□□□□ -0.16
SRM-201ENST00000376957 SCGB3A1Q96QR1 104 aa14.03□□□□□ -0.16
SRM-201ENST00000376957 AMELXQ99217 191 aa14.03□□□□□ -0.16
SRM-201ENST00000376957 DNAH8Q96JB1 4490 aa14.02□□□□□ -0.16
SRM-201ENST00000376957 ERASQ7Z444 233 aa14.02□□□□□ -0.17
SRM-201ENST00000376957 LINC01561Q8N1V8 128 aa14.02□□□□□ -0.17
SRM-201ENST00000376957 TRAPPC1Q9Y5R8 145 aa14.02□□□□□ -0.17
SRM-201ENST00000376957 GAGE2BQ13066 116 aa14.01□□□□□ -0.17
SRM-201ENST00000376957 FAT1Q14517 4588 aa14.01□□□□□ -0.17
SRM-201ENST00000376957 J3QL48 77 aa14□□□□□ -0.17
SRM-201ENST00000376957 PTTG1IPP53801 180 aa14□□□□□ -0.17
SRM-201ENST00000376957 HERVK_113P63121 156 aa14□□□□□ -0.17
SRM-201ENST00000376957 MRPL35Q9NZE8 188 aaKnown RBP14□□□□□ -0.17
SRM-201ENST00000376957 GEMIN7Q9H840 131 aaKnown RBP13.99□□□□□ -0.17
SRM-201ENST00000376957 LINC01546A6NGU7 62 aa13.98□□□□□ -0.17
SRM-201ENST00000376957 PRSS2P07478 247 aa13.98□□□□□ -0.17
SRM-201ENST00000376957 RPL18AQ02543 176 aaKnown RBP13.98□□□□□ -0.17
SRM-201ENST00000376957 PACRGQ96M98 296 aaPredicted RBP13.97□□□□□ -0.17
SRM-201ENST00000376957 KRTAP10-4P60372 401 aaPredicted RBP13.96□□□□□ -0.17
SRM-201ENST00000376957 LINC00173Q6ZV60 143 aa13.96□□□□□ -0.17
SRM-201ENST00000376957 FAM19A3Q7Z5A8 133 aa13.96□□□□□ -0.17
SRM-201ENST00000376957 VPS13BQ7Z7G8 4022 aa13.94□□□□□ -0.18
SRM-201ENST00000376957 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP13.94□□□□□ -0.18
SRM-201ENST00000376957 RAB5BP61020 215 aa13.94□□□□□ -0.18
SRM-201ENST00000376957 CKS1BP61024 79 aa13.94□□□□□ -0.18
SRM-201ENST00000376957 ZC2HC1BQ5TFG8 222 aa13.94□□□□□ -0.18
SRM-201ENST00000376957 FLG2Q5D862 2391 aaPredicted RBP13.93□□□□□ -0.18
SRM-201ENST00000376957 KRTAP29-1A8MX34 341 aaPredicted RBP13.93□□□□□ -0.18
SRM-201ENST00000376957 C6orf226Q5I0X4 101 aa13.93□□□□□ -0.18
SRM-201ENST00000376957 TRBV30A0A0K0K1B3 111 aa13.92□□□□□ -0.18
SRM-201ENST00000376957 UNQ6190/PRO20217Q6UXQ8 127 aa13.92□□□□□ -0.18
SRM-201ENST00000376957 OXTP01178 125 aa13.91□□□□□ -0.18
SRM-201ENST00000376957 LINC00614P0C842 121 aa13.91□□□□□ -0.18
SRM-201ENST00000376957 TOMM7Q9P0U1 55 aa13.91□□□□□ -0.18
SRM-201ENST00000376957 A0A0J9YXV3 536 aa13.9□□□□□ -0.18
SRM-201ENST00000376957 TLX1NBP0CAT3 122 aa13.89□□□□□ -0.19
SRM-201ENST00000376957 KIAA0087Q14695 138 aa13.89□□□□□ -0.19
SRM-201ENST00000376957 PMVKQ15126 192 aa13.89□□□□□ -0.19
SRM-201ENST00000376957 Q8IZM0 81 aa13.89□□□□□ -0.19
SRM-201ENST00000376957 LINC00469Q8N7U9 141 aa13.89□□□□□ -0.19
SRM-201ENST00000376957 C18orf32Q8TCD1 76 aa13.89□□□□□ -0.19
SRM-201ENST00000376957 TINCRA0A1B0GVN0 87 aa13.88□□□□□ -0.19
SRM-201ENST00000376957 C6orf48Q9UBA6 75 aa13.88□□□□□ -0.19
SRM-201ENST00000376957 CDKN2A-AS1Q9UH64 79 aa13.88□□□□□ -0.19
SRM-201ENST00000376957 C10orf25Q5T742 122 aa13.87□□□□□ -0.19
SRM-201ENST00000376957 CST9LQ9H4G1 147 aa13.87□□□□□ -0.19
SRM-201ENST00000376957 CXCL5P42830 114 aa13.86□□□□□ -0.19
SRM-201ENST00000376957 C9orf116Q5BN46 136 aaPredicted RBP13.86□□□□□ -0.19
SRM-201ENST00000376957 Q6ZRP5 223 aa13.86□□□□□ -0.19
SRM-201ENST00000376957 DMBT1Q9UGM3 2413 aaPredicted RBP13.86□□□□□ -0.19
SRM-201ENST00000376957 HBDP02042 147 aa13.85□□□□□ -0.19
SRM-201ENST00000376957 C2orf82Q6UX34 121 aa13.85□□□□□ -0.19
SRM-201ENST00000376957 NDUFC2-KCTD14E9PQ53 114 aa13.84□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 94.6 ms