RNA–Protein interactions for RNA: ENST00000376610.6

HDAC6-202, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 736 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-202ENST00000376610 C1orf137Q5JT78 98 aa11.37□□□□□ -0.59
HDAC6-202ENST00000376610 SPANXA1Q9NS26 97 aa11.37□□□□□ -0.59
HDAC6-202ENST00000376610 NAT8Q9UHE5 227 aa11.37□□□□□ -0.59
HDAC6-202ENST00000376610 SMIM27A0A1W2PRY6 76 aa11.36□□□□□ -0.59
HDAC6-202ENST00000376610 NDUFA1O15239 70 aa11.36□□□□□ -0.59
HDAC6-202ENST00000376610 RPL39P62891 51 aaKnown RBP11.36□□□□□ -0.59
HDAC6-202ENST00000376610 MRPL35Q9NZE8 188 aaKnown RBP11.36□□□□□ -0.59
HDAC6-202ENST00000376610 F8W036 122 aa11.35□□□□□ -0.59
HDAC6-202ENST00000376610 TNFRSF6BO95407 300 aa11.35□□□□□ -0.59
HDAC6-202ENST00000376610 PHF5AQ7RTV0 110 aaKnown RBP11.35□□□□□ -0.59
HDAC6-202ENST00000376610 SMIM2Q9BVW6 85 aa11.35□□□□□ -0.59
HDAC6-202ENST00000376610 IFITM10A6NMD0 228 aa11.34□□□□□ -0.59
HDAC6-202ENST00000376610 HBBP68871 147 aa11.34□□□□□ -0.59
HDAC6-202ENST00000376610 D6R8Y8 96 aa11.33□□□□□ -0.6
HDAC6-202ENST00000376610 MRPS36P82909 103 aaKnown RBP11.33□□□□□ -0.6
HDAC6-202ENST00000376610 TGIF2-C20orf24A0A0A6YYL0 155 aa11.32□□□□□ -0.6
HDAC6-202ENST00000376610 IGHV3OR16-9A0A0B4J2B5 98 aa11.32□□□□□ -0.6
HDAC6-202ENST00000376610 MRPL54Q6P161 138 aaKnown RBP11.32□□□□□ -0.6
HDAC6-202ENST00000376610 DIRC1Q969H9 104 aa11.32□□□□□ -0.6
HDAC6-202ENST00000376610 A0A087WZ39 114 aa11.31□□□□□ -0.6
HDAC6-202ENST00000376610 PPBPP02775 128 aa11.31□□□□□ -0.6
HDAC6-202ENST00000376610 PEA15Q15121 130 aa11.31□□□□□ -0.6
HDAC6-202ENST00000376610 RAB5AP20339 215 aa11.3□□□□□ -0.6
HDAC6-202ENST00000376610 IGLV7-43P04211 117 aa11.29□□□□□ -0.6
HDAC6-202ENST00000376610 IFI27P40305 119 aaPredicted RBP11.29□□□□□ -0.6
HDAC6-202ENST00000376610 NPYP01303 97 aa11.28□□□□□ -0.6
HDAC6-202ENST00000376610 TLX1NBP0CAT3 122 aa11.28□□□□□ -0.6
HDAC6-202ENST00000376610 GAGE2EQ4V326 116 aa11.28□□□□□ -0.6
HDAC6-202ENST00000376610 UNQ6190/PRO20217Q6UXQ8 127 aa11.28□□□□□ -0.6
HDAC6-202ENST00000376610 FAM19A5Q7Z5A7 132 aaPredicted RBP11.28□□□□□ -0.6
HDAC6-202ENST00000376610 SMDT1Q9H4I9 107 aa11.28□□□□□ -0.6
HDAC6-202ENST00000376610 GAGE2DQ9UEU5 116 aa11.28□□□□□ -0.6
HDAC6-202ENST00000376610 C10orf25Q5T742 122 aa11.27□□□□□ -0.61
HDAC6-202ENST00000376610 ORMDL3Q8N138 153 aa11.27□□□□□ -0.61
HDAC6-202ENST00000376610 FAM104AQ969W3 186 aa11.27□□□□□ -0.61
HDAC6-202ENST00000376610 C6orf48Q9UBA6 75 aa11.27□□□□□ -0.61
HDAC6-202ENST00000376610 FAM168BA1KXE4 195 aa11.26□□□□□ -0.61
HDAC6-202ENST00000376610 C9JQL5 133 aa11.26□□□□□ -0.61
HDAC6-202ENST00000376610 A0A1B0GXF2 115 aa11.25□□□□□ -0.61
HDAC6-202ENST00000376610 UBE2BP63146 152 aa11.25□□□□□ -0.61
HDAC6-202ENST00000376610 PRELID3AQ96N28 172 aa11.25□□□□□ -0.61
HDAC6-202ENST00000376610 TRBV30A0A0K0K1B3 111 aa11.24□□□□□ -0.61
HDAC6-202ENST00000376610 H0Y9J4 135 aa11.24□□□□□ -0.61
HDAC6-202ENST00000376610 SRSF3P84103 164 aaKnown RBP11.24□□□□□ -0.61
HDAC6-202ENST00000376610 TMEM136Q6ZRR5 245 aa11.24□□□□□ -0.61
HDAC6-202ENST00000376610 ATP5L2Q7Z4Y8 100 aa11.24□□□□□ -0.61
HDAC6-202ENST00000376610 PRR26Q8N8Z3 221 aa11.24□□□□□ -0.61
HDAC6-202ENST00000376610 PACRGQ96M98 296 aaPredicted RBP11.24□□□□□ -0.61
HDAC6-202ENST00000376610 PYGO1Q9Y3Y4 419 aa11.24□□□□□ -0.61
HDAC6-202ENST00000376610 M0QXV9 152 aa11.23□□□□□ -0.61
HDAC6-202ENST00000376610 TMEM141Q96I45 108 aa11.23□□□□□ -0.61
HDAC6-202ENST00000376610 LINC00242Q5T6M2 205 aa11.22□□□□□ -0.61
HDAC6-202ENST00000376610 TEX43Q6ZNM6 134 aa11.22□□□□□ -0.61
HDAC6-202ENST00000376610 C2orf88Q9BSF0 95 aa11.22□□□□□ -0.61
HDAC6-202ENST00000376610 IGLV4-3A0A075B6K6 122 aa11.21□□□□□ -0.61
HDAC6-202ENST00000376610 KIAA0087Q14695 138 aa11.21□□□□□ -0.61
HDAC6-202ENST00000376610 Q6ZN92 141 aa11.21□□□□□ -0.61
HDAC6-202ENST00000376610 IGLV1-50A0A075B6I6 118 aa11.2□□□□□ -0.62
HDAC6-202ENST00000376610 NDUFC2-KCTD14E9PQ53 114 aa11.2□□□□□ -0.62
HDAC6-202ENST00000376610 LAMTOR2Q9Y2Q5 125 aa11.2□□□□□ -0.62
HDAC6-202ENST00000376610 PRSS2P07478 247 aa11.19□□□□□ -0.62
HDAC6-202ENST00000376610 UBE2D1P51668 147 aa11.19□□□□□ -0.62
HDAC6-202ENST00000376610 C2orf82Q6UX34 121 aa11.19□□□□□ -0.62
HDAC6-202ENST00000376610 KRTAP11-1Q8IUC1 163 aa11.19□□□□□ -0.62
HDAC6-202ENST00000376610 LINC01561Q8N1V8 128 aa11.19□□□□□ -0.62
HDAC6-202ENST00000376610 MAP1LC3AQ9H492 121 aa11.19□□□□□ -0.62
HDAC6-202ENST00000376610 LOC389332A0A1B0GUA5 103 aa11.18□□□□□ -0.62
HDAC6-202ENST00000376610 CYSLTR1Q9Y271 337 aa11.18□□□□□ -0.62
HDAC6-202ENST00000376610 LPAP08519 4548 aa11.17□□□□□ -0.62
HDAC6-202ENST00000376610 RPL13AP40429 203 aaKnown RBP11.16□□□□□ -0.62
HDAC6-202ENST00000376610 CKS1BP61024 79 aa11.16□□□□□ -0.62
HDAC6-202ENST00000376610 VCX2Q9H322 139 aa11.16□□□□□ -0.62
HDAC6-202ENST00000376610 PRSS47A8MTI9 375 aa11.15□□□□□ -0.62
HDAC6-202ENST00000376610 ORMDL2Q53FV1 153 aa11.15□□□□□ -0.62
HDAC6-202ENST00000376610 C2orf66Q6UXQ4 117 aa11.15□□□□□ -0.62
HDAC6-202ENST00000376610 TOMM7Q9P0U1 55 aa11.15□□□□□ -0.62
HDAC6-202ENST00000376610 C6orf226Q5I0X4 101 aa11.14□□□□□ -0.63
HDAC6-202ENST00000376610 C9orf129Q5T035 196 aaKnown RBP11.14□□□□□ -0.63
HDAC6-202ENST00000376610 KRTAP7-1Q8IUC3 87 aa11.14□□□□□ -0.63
HDAC6-202ENST00000376610 Q8N8P6 123 aa11.14□□□□□ -0.63
HDAC6-202ENST00000376610 NPSP0C0P6 89 aa11.13□□□□□ -0.63
HDAC6-202ENST00000376610 K7EMI3 77 aa11.12□□□□□ -0.63
HDAC6-202ENST00000376610 KRTAP1-4P0C5Y4 121 aa11.12□□□□□ -0.63
HDAC6-202ENST00000376610 PAPPA-AS1Q5QFB9 102 aa11.12□□□□□ -0.63
HDAC6-202ENST00000376610 AMELXQ99217 191 aa11.12□□□□□ -0.63
HDAC6-202ENST00000376610 MT-ND4LP03901 98 aa11.11□□□□□ -0.63
HDAC6-202ENST00000376610 SEC11AP67812 179 aa11.11□□□□□ -0.63
HDAC6-202ENST00000376610 PNRC1Q12796 327 aaPredicted RBP11.11□□□□□ -0.63
HDAC6-202ENST00000376610 LBHQ53QV2 105 aaPredicted RBP11.11□□□□□ -0.63
HDAC6-202ENST00000376610 ZC2HC1BQ5TFG8 222 aa11.11□□□□□ -0.63
HDAC6-202ENST00000376610 Q8IZM0 81 aa11.11□□□□□ -0.63
HDAC6-202ENST00000376610 ANAPC16Q96DE5 110 aa11.11□□□□□ -0.63
HDAC6-202ENST00000376610 ALKBH7Q9BT30 221 aaPredicted RBP11.11□□□□□ -0.63
HDAC6-202ENST00000376610 A0A1B0GVG6 124 aa11.1□□□□□ -0.63
HDAC6-202ENST00000376610 G0S2P27469 103 aa11.1□□□□□ -0.63
HDAC6-202ENST00000376610 HERVK_113P63121 156 aa11.1□□□□□ -0.63
HDAC6-202ENST00000376610 LINC00173Q6ZV60 143 aa11.1□□□□□ -0.63
HDAC6-202ENST00000376610 NUPR1O60356 82 aa11.09□□□□□ -0.63
HDAC6-202ENST00000376610 ZNF861PO60384 105 aa11.09□□□□□ -0.63
HDAC6-202ENST00000376610 LINC00469Q8N7U9 141 aa11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 127 ms