RNA–Protein interactions for RNA: ENST00000376575.7

DDR1-228, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 1 (best) BASIC

Gene DDR1, Length 732 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-228ENST00000376575 SLPIP03973 132 aa12.94□□□□□ -0.34
DDR1-228ENST00000376575 GCSHP23434 173 aa12.94□□□□□ -0.34
DDR1-228ENST00000376575 CNBPP62633 177 aaKnown RBP12.94□□□□□ -0.34
DDR1-228ENST00000376575 KIAA1109Q2LD37 5005 aa12.94□□□□□ -0.34
DDR1-228ENST00000376575 HSPG2P98160 4391 aa12.94□□□□□ -0.34
DDR1-228ENST00000376575 IGHV1-58A0A0C4DH39 117 aa12.93□□□□□ -0.34
DDR1-228ENST00000376575 COX7A2LO14548 114 aa12.93□□□□□ -0.34
DDR1-228ENST00000376575 KRTAP10-1P60331 282 aa12.93□□□□□ -0.34
DDR1-228ENST00000376575 COX6A2Q02221 97 aa12.93□□□□□ -0.34
DDR1-228ENST00000376575 BAGE3Q86Y29 109 aa12.93□□□□□ -0.34
DDR1-228ENST00000376575 hDV102S1A0JD36 115 aa12.92□□□□□ -0.34
DDR1-228ENST00000376575 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP12.91□□□□□ -0.34
DDR1-228ENST00000376575 HIST1H2BKO60814 126 aa12.91□□□□□ -0.34
DDR1-228ENST00000376575 HIST1H2BJP06899 126 aa12.91□□□□□ -0.34
DDR1-228ENST00000376575 HIST1H2BOP23527 126 aa12.91□□□□□ -0.34
DDR1-228ENST00000376575 HIST1H2BBP33778 126 aa12.91□□□□□ -0.34
DDR1-228ENST00000376575 HIST1H2BDP58876 126 aa12.91□□□□□ -0.34
DDR1-228ENST00000376575 HIST1H2BCP62807 126 aa12.91□□□□□ -0.34
DDR1-228ENST00000376575 HIST2H2BEQ16778 126 aa12.91□□□□□ -0.34
DDR1-228ENST00000376575 HIST2H2BFQ5QNW6 126 aaPredicted RBP12.91□□□□□ -0.34
DDR1-228ENST00000376575 C5orf38Q86SI9 138 aa12.91□□□□□ -0.34
DDR1-228ENST00000376575 HIST1H2BHQ93079 126 aa12.91□□□□□ -0.34
DDR1-228ENST00000376575 HIST1H2BNQ99877 126 aa12.91□□□□□ -0.34
DDR1-228ENST00000376575 HIST1H2BMQ99879 126 aa12.91□□□□□ -0.34
DDR1-228ENST00000376575 CST9LQ9H4G1 147 aa12.91□□□□□ -0.34
DDR1-228ENST00000376575 RYR1P21817 5038 aa12.91□□□□□ -0.34
DDR1-228ENST00000376575 A0A087WZ39 114 aa12.9□□□□□ -0.34
DDR1-228ENST00000376575 SERF1AO75920 110 aa12.9□□□□□ -0.34
DDR1-228ENST00000376575 PMVKQ15126 192 aa12.89□□□□□ -0.35
DDR1-228ENST00000376575 LINC01561Q8N1V8 128 aa12.89□□□□□ -0.35
DDR1-228ENST00000376575 C9orf163Q8N9P6 203 aa12.89□□□□□ -0.35
DDR1-228ENST00000376575 NUPR1O60356 82 aa12.88□□□□□ -0.35
DDR1-228ENST00000376575 HSBP1O75506 76 aa12.88□□□□□ -0.35
DDR1-228ENST00000376575 ATP5LO75964 103 aa12.88□□□□□ -0.35
DDR1-228ENST00000376575 MALP21145 153 aa12.88□□□□□ -0.35
DDR1-228ENST00000376575 SEC11AP67812 179 aa12.88□□□□□ -0.35
DDR1-228ENST00000376575 HIGD2BQ4VC39 106 aa12.88□□□□□ -0.35
DDR1-228ENST00000376575 CDK2AP2O75956 126 aa12.87□□□□□ -0.35
DDR1-228ENST00000376575 IGHV3-64A0A075B6Q5 118 aa12.86□□□□□ -0.35
DDR1-228ENST00000376575 TINCRA0A1B0GVN0 87 aa12.86□□□□□ -0.35
DDR1-228ENST00000376575 HERVK_113P63121 156 aa12.86□□□□□ -0.35
DDR1-228ENST00000376575 FAM19A2Q8N3H0 131 aa12.86□□□□□ -0.35
DDR1-228ENST00000376575 IGLV5-45A0A087WSX0 123 aa12.85□□□□□ -0.35
DDR1-228ENST00000376575 A0A0J9YXV3 536 aa12.85□□□□□ -0.35
DDR1-228ENST00000376575 APOMO95445 188 aa12.85□□□□□ -0.35
DDR1-228ENST00000376575 LINC01620Q4KN68 170 aa12.85□□□□□ -0.35
DDR1-228ENST00000376575 Q6ZSA8 131 aa12.85□□□□□ -0.35
DDR1-228ENST00000376575 OR10D4PQ8NGN7 298 aa12.85□□□□□ -0.35
DDR1-228ENST00000376575 CDKN2A-AS1Q9UH64 79 aa12.83□□□□□ -0.36
DDR1-228ENST00000376575 HERC2O95714 4834 aa12.83□□□□□ -0.36
DDR1-228ENST00000376575 IGLV4-69A0A075B6H9 119 aa12.82□□□□□ -0.36
DDR1-228ENST00000376575 TRAV16A0A0A6YYK6 109 aaPredicted RBP12.82□□□□□ -0.36
DDR1-228ENST00000376575 ZNF561-AS1K7EIQ3 104 aa12.82□□□□□ -0.36
DDR1-228ENST00000376575 IGLC3P0DOY3 106 aa12.82□□□□□ -0.36
DDR1-228ENST00000376575 COA6Q5JTJ3 125 aaKnown RBP12.82□□□□□ -0.36
DDR1-228ENST00000376575 SDIM1Q6ZPB5 146 aa12.82□□□□□ -0.36
DDR1-228ENST00000376575 IFI27L1Q96BM0 104 aa12.82□□□□□ -0.36
DDR1-228ENST00000376575 LINC00526Q96FQ7 95 aa12.82□□□□□ -0.36
DDR1-228ENST00000376575 C2orf48Q96LS8 159 aa12.82□□□□□ -0.36
DDR1-228ENST00000376575 FAM30AQ9NZY2 134 aa12.82□□□□□ -0.36
DDR1-228ENST00000376575 XGP55808 180 aa12.81□□□□□ -0.36
DDR1-228ENST00000376575 KIAA0087Q14695 138 aa12.81□□□□□ -0.36
DDR1-228ENST00000376575 GEMIN7Q9H840 131 aaKnown RBP12.81□□□□□ -0.36
DDR1-228ENST00000376575 TRAV12-1A0A0B4J245 112 aa12.8□□□□□ -0.36
DDR1-228ENST00000376575 F8WDY8 70 aa12.8□□□□□ -0.36
DDR1-228ENST00000376575 SPAG11BQ08648 103 aa12.8□□□□□ -0.36
DDR1-228ENST00000376575 ORAOV1Q8WV07 137 aa12.8□□□□□ -0.36
DDR1-228ENST00000376575 LEPROTL1O95214 131 aa12.78□□□□□ -0.36
DDR1-228ENST00000376575 SYCNQ0VAF6 134 aa12.78□□□□□ -0.36
DDR1-228ENST00000376575 NDUFA6P56556 154 aa12.77□□□□□ -0.37
DDR1-228ENST00000376575 LINC00469Q8N7U9 141 aa12.77□□□□□ -0.37
DDR1-228ENST00000376575 CARD19Q96LW7 228 aa12.77□□□□□ -0.37
DDR1-228ENST00000376575 Q6ZRU5 148 aa12.76□□□□□ -0.37
DDR1-228ENST00000376575 FAT1Q14517 4588 aa12.75□□□□□ -0.37
DDR1-228ENST00000376575 SMIM1B2RUZ4 78 aa12.75□□□□□ -0.37
DDR1-228ENST00000376575 CIRBPQ14011 172 aaKnown RBP12.75□□□□□ -0.37
DDR1-228ENST00000376575 CAMK2N2Q96S95 79 aa12.75□□□□□ -0.37
DDR1-228ENST00000376575 CHAC1Q9BUX1 264 aa12.75□□□□□ -0.37
DDR1-228ENST00000376575 HSPB8Q9UJY1 196 aa12.75□□□□□ -0.37
DDR1-228ENST00000376575 C11orf86A6NJI1 115 aa12.74□□□□□ -0.37
DDR1-228ENST00000376575 ZNF22P17026 224 aaPredicted RBP12.74□□□□□ -0.37
DDR1-228ENST00000376575 RNF151Q2KHN1 245 aa12.74□□□□□ -0.37
DDR1-228ENST00000376575 PACRGQ96M98 296 aaPredicted RBP12.74□□□□□ -0.37
DDR1-228ENST00000376575 MRPL35Q9NZE8 188 aaKnown RBP12.74□□□□□ -0.37
DDR1-228ENST00000376575 CHTOPQ9Y3Y2 248 aaKnown RBP12.74□□□□□ -0.37
DDR1-228ENST00000376575 Q8IZM0 81 aa12.73□□□□□ -0.37
DDR1-228ENST00000376575 F8VRH5 84 aa12.72□□□□□ -0.37
DDR1-228ENST00000376575 C10orf25Q5T742 122 aa12.72□□□□□ -0.37
DDR1-228ENST00000376575 H3BRM9 83 aa12.71□□□□□ -0.37
DDR1-228ENST00000376575 PANO1I0J062 215 aa12.71□□□□□ -0.37
DDR1-228ENST00000376575 NDUFA1O15239 70 aa12.71□□□□□ -0.37
DDR1-228ENST00000376575 FABP4P15090 132 aa12.71□□□□□ -0.37
DDR1-228ENST00000376575 ODF1Q14990 250 aa12.71□□□□□ -0.37
DDR1-228ENST00000376575 UNQ6190/PRO20217Q6UXQ8 127 aa12.71□□□□□ -0.37
DDR1-228ENST00000376575 KRTAP17-1Q9BYP8 105 aa12.71□□□□□ -0.37
DDR1-228ENST00000376575 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP12.71□□□□□ -0.37
DDR1-228ENST00000376575 IGLV5-39A0A0G2JS06 123 aa12.7□□□□□ -0.38
DDR1-228ENST00000376575 SPINK8P0C7L1 97 aa12.69□□□□□ -0.38
DDR1-228ENST00000376575 C6orf48Q9UBA6 75 aa12.69□□□□□ -0.38
DDR1-228ENST00000376575 C2orf82Q6UX34 121 aa12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms