RNA–Protein interactions for RNA: ENST00000375274.6

PTCH1-203, Transcript of patched 1, humanhuman

TSL 5 BASIC

Gene PTCH1, Length 4,720 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-203ENST00000375274 USP17L23D6RBM5 183 aa8.41□□□□□ -1.06
PTCH1-203ENST00000375274 FAM110AQ9BQ89 295 aa8.41□□□□□ -1.06
PTCH1-203ENST00000375274 WFDC9Q8NEX5 89 aa8.41□□□□□ -1.06
PTCH1-203ENST00000375274 FAM240AA0A1B0GVK7 77 aa8.41□□□□□ -1.06
PTCH1-203ENST00000375274 NDUFB1O75438 58 aa8.41□□□□□ -1.06
PTCH1-203ENST00000375274 NDUFA7O95182 113 aa8.4□□□□□ -1.06
PTCH1-203ENST00000375274 Q6Q795 121 aa8.4□□□□□ -1.06
PTCH1-203ENST00000375274 BBC3Q96PG8 261 aaPredicted RBP8.4□□□□□ -1.06
PTCH1-203ENST00000375274 SERP2Q8N6R1 65 aa8.4□□□□□ -1.06
PTCH1-203ENST00000375274 WFDC10AQ9H1F0 79 aa8.4□□□□□ -1.06
PTCH1-203ENST00000375274 A0A1W2PPR1 153 aa8.4□□□□□ -1.07
PTCH1-203ENST00000375274 LINC00959A0A1B0GUT2 108 aa8.39□□□□□ -1.07
PTCH1-203ENST00000375274 SCXQ7RTU7 201 aa8.39□□□□□ -1.07
PTCH1-203ENST00000375274 CD164L2Q6UWJ8 174 aa8.39□□□□□ -1.07
PTCH1-203ENST00000375274 ZNF580Q9UK33 172 aa8.39□□□□□ -1.07
PTCH1-203ENST00000375274 C5orf47Q569G3 176 aa8.39□□□□□ -1.07
PTCH1-203ENST00000375274 Q6ZQY7 126 aa8.39□□□□□ -1.07
PTCH1-203ENST00000375274 LINC00482Q8N8I6 264 aa8.39□□□□□ -1.07
PTCH1-203ENST00000375274 SMIM1B2RUZ4 78 aa8.38□□□□□ -1.07
PTCH1-203ENST00000375274 FAM236DA0A1B0GTK5 79 aa8.38□□□□□ -1.07
PTCH1-203ENST00000375274 FAM236CP0DP71 79 aa8.38□□□□□ -1.07
PTCH1-203ENST00000375274 COX7CP15954 63 aa8.38□□□□□ -1.07
PTCH1-203ENST00000375274 CLUHP3Q96NS8 147 aa8.38□□□□□ -1.07
PTCH1-203ENST00000375274 ZNF462Q96JM2 2506 aa8.38□□□□□ -1.07
PTCH1-203ENST00000375274 ADAMTSL4-AS1Q5T5F5 129 aa8.38□□□□□ -1.07
PTCH1-203ENST00000375274 NDUFC2O95298 119 aa8.37□□□□□ -1.07
PTCH1-203ENST00000375274 ODF3L2Q3SX64 289 aa8.37□□□□□ -1.07
PTCH1-203ENST00000375274 AMELXQ99217 191 aa8.37□□□□□ -1.07
PTCH1-203ENST00000375274 LINC01006Q8NI28 216 aa8.37□□□□□ -1.07
PTCH1-203ENST00000375274 PKIGQ9Y2B9 76 aa8.37□□□□□ -1.07
PTCH1-203ENST00000375274 LINC00526Q96FQ7 95 aa8.37□□□□□ -1.07
PTCH1-203ENST00000375274 CHCHD7Q9BUK0 85 aa8.37□□□□□ -1.07
PTCH1-203ENST00000375274 RAI1Q7Z5J4 1906 aaPredicted RBP8.36□□□□□ -1.07
PTCH1-203ENST00000375274 BRI3O95415 125 aa8.36□□□□□ -1.07
PTCH1-203ENST00000375274 UBE2AP49459 152 aa8.36□□□□□ -1.07
PTCH1-203ENST00000375274 CCKP06307 115 aa8.35□□□□□ -1.07
PTCH1-203ENST00000375274 MIFP14174 115 aa8.35□□□□□ -1.07
PTCH1-203ENST00000375274 HIGD2AQ9BW72 106 aa8.34□□□□□ -1.07
PTCH1-203ENST00000375274 LINC00694P0DN24 101 aa8.34□□□□□ -1.07
PTCH1-203ENST00000375274 Q8IZM0 81 aa8.34□□□□□ -1.07
PTCH1-203ENST00000375274 C11orf45Q8TAV5 145 aa8.34□□□□□ -1.07
PTCH1-203ENST00000375274 PTPRBP23467 1997 aa8.34□□□□□ -1.07
PTCH1-203ENST00000375274 IGKV2-24A0A0C4DH68 120 aa8.34□□□□□ -1.08
PTCH1-203ENST00000375274 COX6A2Q02221 97 aa8.34□□□□□ -1.08
PTCH1-203ENST00000375274 KIF25-AS1Q9Y6Z4 181 aa8.34□□□□□ -1.08
PTCH1-203ENST00000375274 RPL28P46779 137 aaKnown RBP8.33□□□□□ -1.08
PTCH1-203ENST00000375274 ACANP16112 2415 aa8.33□□□□□ -1.08
PTCH1-203ENST00000375274 BRK1Q8WUW1 75 aa8.33□□□□□ -1.08
PTCH1-203ENST00000375274 Q6JHZ5 121 aa8.32□□□□□ -1.08
PTCH1-203ENST00000375274 SYCNQ0VAF6 134 aa8.32□□□□□ -1.08
PTCH1-203ENST00000375274 CSDC2Q9Y534 153 aaKnown RBP8.32□□□□□ -1.08
PTCH1-203ENST00000375274 C1orf158Q8N1D5 194 aa8.31□□□□□ -1.08
PTCH1-203ENST00000375274 DEFB131BA0A096LNP1 70 aa8.31□□□□□ -1.08
PTCH1-203ENST00000375274 LINC01546A6NGU7 62 aa8.31□□□□□ -1.08
PTCH1-203ENST00000375274 COX17Q14061 63 aa8.31□□□□□ -1.08
PTCH1-203ENST00000375274 FASNP49327 2511 aaKnown RBP8.3□□□□□ -1.08
PTCH1-203ENST00000375274 A0A087WZ39 114 aa8.3□□□□□ -1.08
PTCH1-203ENST00000375274 H0Y9J4 135 aa8.3□□□□□ -1.08
PTCH1-203ENST00000375274 CDIP1Q9H305 208 aa8.3□□□□□ -1.08
PTCH1-203ENST00000375274 C3orf84H3BNL1 204 aa8.3□□□□□ -1.08
PTCH1-203ENST00000375274 LELP1Q5T871 98 aa8.3□□□□□ -1.08
PTCH1-203ENST00000375274 IGLV4-60A0A075B6I1 120 aa8.29□□□□□ -1.08
PTCH1-203ENST00000375274 BEAN1Q3B7T3 259 aa8.29□□□□□ -1.08
PTCH1-203ENST00000375274 NTM-AS1Q6ZSK4 140 aa8.29□□□□□ -1.08
PTCH1-203ENST00000375274 Q6ZSN1 163 aa8.29□□□□□ -1.08
PTCH1-203ENST00000375274 MPLKIPQ8TAP9 179 aa8.29□□□□□ -1.08
PTCH1-203ENST00000375274 SNURFQ9Y675 71 aa8.29□□□□□ -1.08
PTCH1-203ENST00000375274 IGKV2-28A0A075B6P5 120 aa8.28□□□□□ -1.08
PTCH1-203ENST00000375274 CYSRT1A8MQ03 144 aa8.28□□□□□ -1.08
PTCH1-203ENST00000375274 M0R378 163 aa8.28□□□□□ -1.08
PTCH1-203ENST00000375274 IGKV2D-28P01615 120 aa8.28□□□□□ -1.08
PTCH1-203ENST00000375274 MUC7Q8TAX7 377 aa8.28□□□□□ -1.08
PTCH1-203ENST00000375274 A0A087WVE0 104 aa8.28□□□□□ -1.08
PTCH1-203ENST00000375274 LINC00315P59091 139 aa8.28□□□□□ -1.08
PTCH1-203ENST00000375274 NDUFC1O43677 76 aa8.27□□□□□ -1.09
PTCH1-203ENST00000375274 ZNF73O43830 326 aaPredicted RBP8.27□□□□□ -1.09
PTCH1-203ENST00000375274 FAM19A3Q7Z5A8 133 aa8.27□□□□□ -1.09
PTCH1-203ENST00000375274 A0A096LNI7 61 aa8.27□□□□□ -1.09
PTCH1-203ENST00000375274 M0QXV9 152 aa8.27□□□□□ -1.09
PTCH1-203ENST00000375274 MUC4Q99102 2169 aa8.27□□□□□ -1.09
PTCH1-203ENST00000375274 UNQ6190/PRO20217Q6UXQ8 127 aa8.27□□□□□ -1.09
PTCH1-203ENST00000375274 INAFM1C9JVW0 142 aa8.27□□□□□ -1.09
PTCH1-203ENST00000375274 A0A087WYN8 130 aa8.26□□□□□ -1.09
PTCH1-203ENST00000375274 KIR2DL5BQ8NHK3 375 aa8.26□□□□□ -1.09
PTCH1-203ENST00000375274 KPRPQ5T749 579 aaPredicted RBP8.26□□□□□ -1.09
PTCH1-203ENST00000375274 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP8.26□□□□□ -1.09
PTCH1-203ENST00000375274 FAM19A1Q7Z5A9 133 aa8.26□□□□□ -1.09
PTCH1-203ENST00000375274 SMCPP49901 116 aaPredicted RBP8.25□□□□□ -1.09
PTCH1-203ENST00000375274 Q8N814 137 aa8.25□□□□□ -1.09
PTCH1-203ENST00000375274 NDUFC2-KCTD14E9PQ53 114 aa8.25□□□□□ -1.09
PTCH1-203ENST00000375274 HILS1P60008 231 aa8.25□□□□□ -1.09
PTCH1-203ENST00000375274 C9orf116Q5BN46 136 aaPredicted RBP8.25□□□□□ -1.09
PTCH1-203ENST00000375274 PRR3P79522 188 aaKnown RBP8.25□□□□□ -1.09
PTCH1-203ENST00000375274 CHKB-CPT1BH3BT56 60 aa8.25□□□□□ -1.09
PTCH1-203ENST00000375274 ZNF843Q8N446 348 aa8.25□□□□□ -1.09
PTCH1-203ENST00000375274 B9D2Q9BPU9 175 aa8.25□□□□□ -1.09
PTCH1-203ENST00000375274 ANKRD17O75179 2603 aaKnown RBP8.24□□□□□ -1.09
PTCH1-203ENST00000375274 IGLV1-51P01701 117 aa8.24□□□□□ -1.09
PTCH1-203ENST00000375274 FAM19A5Q7Z5A7 132 aaPredicted RBP8.24□□□□□ -1.09
PTCH1-203ENST00000375274 PRO0461Q9UI25 63 aa8.24□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 158.4 ms