RNA–Protein interactions for RNA: ENST00000374837.7

MAP1LC3A-202, Transcript of microtubule associated protein 1 light chain 3 alpha, humanhuman

TSL 3 BASIC

Gene MAP1LC3A, Length 961 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3A-202ENST00000374837 LINC00173Q6ZV60 143 aa13.53□□□□□ -0.24
MAP1LC3A-202ENST00000374837 LINC00526Q96FQ7 95 aa13.53□□□□□ -0.24
MAP1LC3A-202ENST00000374837 VCX2Q9H322 139 aa13.53□□□□□ -0.24
MAP1LC3A-202ENST00000374837 IGHV3OR16-9A0A0B4J2B5 98 aa13.52□□□□□ -0.25
MAP1LC3A-202ENST00000374837 SDIM1Q6ZPB5 146 aa13.52□□□□□ -0.25
MAP1LC3A-202ENST00000374837 Q8N1X5 172 aa13.52□□□□□ -0.25
MAP1LC3A-202ENST00000374837 URB1-AS1Q96HZ7 61 aa13.52□□□□□ -0.25
MAP1LC3A-202ENST00000374837 TIMM17AQ99595 171 aa13.52□□□□□ -0.25
MAP1LC3A-202ENST00000374837 UBE2D1P51668 147 aa13.51□□□□□ -0.25
MAP1LC3A-202ENST00000374837 LINC00242Q5T6M2 205 aa13.51□□□□□ -0.25
MAP1LC3A-202ENST00000374837 ERASQ7Z444 233 aa13.51□□□□□ -0.25
MAP1LC3A-202ENST00000374837 SCGB3A1Q96QR1 104 aa13.51□□□□□ -0.25
MAP1LC3A-202ENST00000374837 LINC00614P0C842 121 aa13.5□□□□□ -0.25
MAP1LC3A-202ENST00000374837 COX6A2Q02221 97 aa13.5□□□□□ -0.25
MAP1LC3A-202ENST00000374837 C2orf88Q9BSF0 95 aa13.5□□□□□ -0.25
MAP1LC3A-202ENST00000374837 ZNF561-AS1K7EIQ3 104 aa13.49□□□□□ -0.25
MAP1LC3A-202ENST00000374837 SMR3BP02814 79 aaPredicted RBP13.49□□□□□ -0.25
MAP1LC3A-202ENST00000374837 PAPPA-AS1Q5QFB9 102 aa13.49□□□□□ -0.25
MAP1LC3A-202ENST00000374837 HERC1Q15751 4861 aa13.48□□□□□ -0.25
MAP1LC3A-202ENST00000374837 IGHV3-64A0A075B6Q5 118 aa13.48□□□□□ -0.25
MAP1LC3A-202ENST00000374837 LINC01549A6NIU2 74 aa13.48□□□□□ -0.25
MAP1LC3A-202ENST00000374837 APOMO95445 188 aa13.47□□□□□ -0.25
MAP1LC3A-202ENST00000374837 CHAC1Q9BUX1 264 aa13.47□□□□□ -0.25
MAP1LC3A-202ENST00000374837 IGLV4-69A0A075B6H9 119 aa13.46□□□□□ -0.25
MAP1LC3A-202ENST00000374837 SCXQ7RTU7 201 aa13.46□□□□□ -0.25
MAP1LC3A-202ENST00000374837 A0A096LNJ9 63 aa13.45□□□□□ -0.26
MAP1LC3A-202ENST00000374837 COLCA2A8K830 154 aa13.45□□□□□ -0.26
MAP1LC3A-202ENST00000374837 RAB5BP61020 215 aa13.45□□□□□ -0.26
MAP1LC3A-202ENST00000374837 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP13.45□□□□□ -0.26
MAP1LC3A-202ENST00000374837 A0A087WZ39 114 aa13.44□□□□□ -0.26
MAP1LC3A-202ENST00000374837 PANO1I0J062 215 aa13.44□□□□□ -0.26
MAP1LC3A-202ENST00000374837 TRGC2P03986 189 aa13.44□□□□□ -0.26
MAP1LC3A-202ENST00000374837 SYCNQ0VAF6 134 aa13.44□□□□□ -0.26
MAP1LC3A-202ENST00000374837 FAM19A3Q7Z5A8 133 aa13.44□□□□□ -0.26
MAP1LC3A-202ENST00000374837 CIRBP-AS1Q8TBR5 109 aa13.44□□□□□ -0.26
MAP1LC3A-202ENST00000374837 SPAG11BQ08648 103 aa13.43□□□□□ -0.26
MAP1LC3A-202ENST00000374837 OR10D4PQ8NGN7 298 aa13.43□□□□□ -0.26
MAP1LC3A-202ENST00000374837 ORAOV1Q8WV07 137 aa13.43□□□□□ -0.26
MAP1LC3A-202ENST00000374837 CARD19Q96LW7 228 aa13.43□□□□□ -0.26
MAP1LC3A-202ENST00000374837 PMCHL1Q16048 86 aa13.42□□□□□ -0.26
MAP1LC3A-202ENST00000374837 C2orf48Q96LS8 159 aa13.42□□□□□ -0.26
MAP1LC3A-202ENST00000374837 EPM2AB3EWF7 344 aa13.41□□□□□ -0.26
MAP1LC3A-202ENST00000374837 SCO1O75880 301 aa13.41□□□□□ -0.26
MAP1LC3A-202ENST00000374837 HBDP02042 147 aa13.41□□□□□ -0.26
MAP1LC3A-202ENST00000374837 Q6ZRU5 148 aa13.41□□□□□ -0.26
MAP1LC3A-202ENST00000374837 CST9LQ9H4G1 147 aa13.41□□□□□ -0.26
MAP1LC3A-202ENST00000374837 FAT1Q14517 4588 aa13.41□□□□□ -0.26
MAP1LC3A-202ENST00000374837 A0A0J9YXV3 536 aa13.4□□□□□ -0.26
MAP1LC3A-202ENST00000374837 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP13.4□□□□□ -0.26
MAP1LC3A-202ENST00000374837 CHTF8P0CG12 524 aa13.4□□□□□ -0.26
MAP1LC3A-202ENST00000374837 LINC01561Q8N1V8 128 aa13.4□□□□□ -0.26
MAP1LC3A-202ENST00000374837 CAMK2N2Q96S95 79 aa13.4□□□□□ -0.26
MAP1LC3A-202ENST00000374837 SEC11AP67812 179 aa13.39□□□□□ -0.27
MAP1LC3A-202ENST00000374837 CIRBPQ14011 172 aaKnown RBP13.39□□□□□ -0.27
MAP1LC3A-202ENST00000374837 PMVKQ15126 192 aa13.39□□□□□ -0.27
MAP1LC3A-202ENST00000374837 PDZD11Q5EBL8 140 aa13.39□□□□□ -0.27
MAP1LC3A-202ENST00000374837 HERVK_113P63121 156 aa13.38□□□□□ -0.27
MAP1LC3A-202ENST00000374837 Q5VSD8 79 aa13.38□□□□□ -0.27
MAP1LC3A-202ENST00000374837 CHCHD1Q96BP2 118 aaKnown RBP13.38□□□□□ -0.27
MAP1LC3A-202ENST00000374837 GEMIN7Q9H840 131 aaKnown RBP13.38□□□□□ -0.27
MAP1LC3A-202ENST00000374837 KIAA0087Q14695 138 aa13.37□□□□□ -0.27
MAP1LC3A-202ENST00000374837 DPH3Q96FX2 82 aa13.37□□□□□ -0.27
MAP1LC3A-202ENST00000374837 CDKN2A-AS1Q9UH64 79 aa13.37□□□□□ -0.27
MAP1LC3A-202ENST00000374837 F8WDY8 70 aa13.36□□□□□ -0.27
MAP1LC3A-202ENST00000374837 FAM229AH3BQW9 127 aa13.36□□□□□ -0.27
MAP1LC3A-202ENST00000374837 BAGE3Q86Y29 109 aa13.36□□□□□ -0.27
MAP1LC3A-202ENST00000374837 IGKV2-24A0A0C4DH68 120 aa13.35□□□□□ -0.27
MAP1LC3A-202ENST00000374837 TINCRA0A1B0GVN0 87 aa13.35□□□□□ -0.27
MAP1LC3A-202ENST00000374837 LINC00528Q8N1L1 170 aa13.35□□□□□ -0.27
MAP1LC3A-202ENST00000374837 SPACA4Q8TDM5 124 aa13.35□□□□□ -0.27
MAP1LC3A-202ENST00000374837 DMBT1Q9UGM3 2413 aaPredicted RBP13.35□□□□□ -0.27
MAP1LC3A-202ENST00000374837 A0A096LNI7 61 aa13.34□□□□□ -0.27
MAP1LC3A-202ENST00000374837 A0A087WYN8 130 aa13.33□□□□□ -0.28
MAP1LC3A-202ENST00000374837 NDUFA1O15239 70 aa13.33□□□□□ -0.28
MAP1LC3A-202ENST00000374837 ATP5LO75964 103 aa13.33□□□□□ -0.28
MAP1LC3A-202ENST00000374837 NDUFA6P56556 154 aa13.33□□□□□ -0.28
MAP1LC3A-202ENST00000374837 RNF151Q2KHN1 245 aa13.33□□□□□ -0.28
MAP1LC3A-202ENST00000374837 MAJINQ3KP22 176 aa13.33□□□□□ -0.28
MAP1LC3A-202ENST00000374837 C10orf25Q5T742 122 aa13.33□□□□□ -0.28
MAP1LC3A-202ENST00000374837 UNQ6190/PRO20217Q6UXQ8 127 aa13.33□□□□□ -0.28
MAP1LC3A-202ENST00000374837 LINC00469Q8N7U9 141 aa13.33□□□□□ -0.28
MAP1LC3A-202ENST00000374837 PKIGQ9Y2B9 76 aa13.33□□□□□ -0.28
MAP1LC3A-202ENST00000374837 MRPL35Q9NZE8 188 aaKnown RBP13.32□□□□□ -0.28
MAP1LC3A-202ENST00000374837 IGLV5-45A0A087WSX0 123 aa13.31□□□□□ -0.28
MAP1LC3A-202ENST00000374837 LOC107984640A0A0U1RRK4 108 aa13.31□□□□□ -0.28
MAP1LC3A-202ENST00000374837 HSBP1O75506 76 aa13.3□□□□□ -0.28
MAP1LC3A-202ENST00000374837 C2orf82Q6UX34 121 aa13.3□□□□□ -0.28
MAP1LC3A-202ENST00000374837 FAM19A2Q8N3H0 131 aa13.3□□□□□ -0.28
MAP1LC3A-202ENST00000374837 PACRGQ96M98 296 aaPredicted RBP13.3□□□□□ -0.28
MAP1LC3A-202ENST00000374837 PLAC8Q9NZF1 115 aa13.3□□□□□ -0.28
MAP1LC3A-202ENST00000374837 TOMM7Q9P0U1 55 aa13.3□□□□□ -0.28
MAP1LC3A-202ENST00000374837 LINC00310P59036 64 aa13.29□□□□□ -0.28
MAP1LC3A-202ENST00000374837 GAGE2BQ13066 116 aa13.29□□□□□ -0.28
MAP1LC3A-202ENST00000374837 C6orf48Q9UBA6 75 aa13.29□□□□□ -0.28
MAP1LC3A-202ENST00000374837 SERF1AO75920 110 aa13.28□□□□□ -0.28
MAP1LC3A-202ENST00000374837 PRSS2P07478 247 aa13.28□□□□□ -0.28
MAP1LC3A-202ENST00000374837 IGLC3P0DOY3 106 aa13.28□□□□□ -0.28
MAP1LC3A-202ENST00000374837 PTTG1IPP53801 180 aa13.28□□□□□ -0.28
MAP1LC3A-202ENST00000374837 LINC00474Q9P2X8 69 aa13.28□□□□□ -0.28
MAP1LC3A-202ENST00000374837 SMIM1B2RUZ4 78 aa13.27□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 65.9 ms