RNA–Protein interactions for RNA: ENST00000374426.6

CXCL12-202, Transcript of C-X-C motif chemokine ligand 12, humanhuman

TSL 1 (best) BASIC

Gene CXCL12, Length 470 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-202ENST00000374426 TLX1NBP0CAT3 122 aa8.31□□□□□ -1.08
CXCL12-202ENST00000374426 UNQ6190/PRO20217Q6UXQ8 127 aa8.31□□□□□ -1.08
CXCL12-202ENST00000374426 KRTAP7-1Q8IUC3 87 aa8.31□□□□□ -1.08
CXCL12-202ENST00000374426 C20orf78Q9BR46 151 aa8.31□□□□□ -1.08
CXCL12-202ENST00000374426 EIF5A2Q9GZV4 153 aaKnown RBP8.31□□□□□ -1.08
CXCL12-202ENST00000374426 C6orf48Q9UBA6 75 aa8.31□□□□□ -1.08
CXCL12-202ENST00000374426 IGLV1-50A0A075B6I6 118 aa8.3□□□□□ -1.08
CXCL12-202ENST00000374426 TRBV24-1A0A075B6N3 115 aa8.3□□□□□ -1.08
CXCL12-202ENST00000374426 RPL32P62910 135 aaKnown RBP8.3□□□□□ -1.08
CXCL12-202ENST00000374426 TMEM241Q24JQ0 296 aa8.3□□□□□ -1.08
CXCL12-202ENST00000374426 FAM19A5Q7Z5A7 132 aaPredicted RBP8.3□□□□□ -1.08
CXCL12-202ENST00000374426 NAT8BQ9UHF3 227 aa8.3□□□□□ -1.08
CXCL12-202ENST00000374426 LINC00862A6NCI5 91 aa8.29□□□□□ -1.08
CXCL12-202ENST00000374426 SRP19P09132 144 aaKnown RBP8.29□□□□□ -1.08
CXCL12-202ENST00000374426 GAGE2EQ4V326 116 aa8.29□□□□□ -1.08
CXCL12-202ENST00000374426 SMDT1Q9H4I9 107 aa8.29□□□□□ -1.08
CXCL12-202ENST00000374426 SPANXA1Q9NS26 97 aa8.29□□□□□ -1.08
CXCL12-202ENST00000374426 GAGE2DQ9UEU5 116 aa8.29□□□□□ -1.08
CXCL12-202ENST00000374426 MRPS36P82909 103 aaKnown RBP8.28□□□□□ -1.08
CXCL12-202ENST00000374426 SMIM2Q9BVW6 85 aa8.28□□□□□ -1.08
CXCL12-202ENST00000374426 IFITM10A6NMD0 228 aa8.27□□□□□ -1.09
CXCL12-202ENST00000374426 TCAPO15273 167 aa8.27□□□□□ -1.09
CXCL12-202ENST00000374426 TNFRSF6BO95407 300 aa8.27□□□□□ -1.09
CXCL12-202ENST00000374426 CKS2P33552 79 aa8.27□□□□□ -1.09
CXCL12-202ENST00000374426 HBBP68871 147 aa8.27□□□□□ -1.09
CXCL12-202ENST00000374426 KIAA0087Q14695 138 aa8.27□□□□□ -1.09
CXCL12-202ENST00000374426 FAM74A3Q4VXF1 159 aa8.27□□□□□ -1.09
CXCL12-202ENST00000374426 SMIM27A0A1W2PRY6 76 aa8.26□□□□□ -1.09
CXCL12-202ENST00000374426 M0QXV9 152 aa8.26□□□□□ -1.09
CXCL12-202ENST00000374426 RPL23P62829 140 aaKnown RBP8.26□□□□□ -1.09
CXCL12-202ENST00000374426 D6R8Y8 96 aa8.25□□□□□ -1.09
CXCL12-202ENST00000374426 UBE2BP63146 152 aa8.25□□□□□ -1.09
CXCL12-202ENST00000374426 PRR4Q16378 134 aa8.25□□□□□ -1.09
CXCL12-202ENST00000374426 TGIF2-C20orf24A0A0A6YYL0 155 aa8.24□□□□□ -1.09
CXCL12-202ENST00000374426 A0A1B0GW15 77 aa8.24□□□□□ -1.09
CXCL12-202ENST00000374426 NPYP01303 97 aa8.24□□□□□ -1.09
CXCL12-202ENST00000374426 UBE2D1P51668 147 aa8.24□□□□□ -1.09
CXCL12-202ENST00000374426 C9orf129Q5T035 196 aaKnown RBP8.24□□□□□ -1.09
CXCL12-202ENST00000374426 TRBV30A0A0K0K1B3 111 aa8.23□□□□□ -1.09
CXCL12-202ENST00000374426 NDUFC2-KCTD14E9PQ53 114 aa8.23□□□□□ -1.09
CXCL12-202ENST00000374426 RPL13AP40429 203 aaKnown RBP8.23□□□□□ -1.09
CXCL12-202ENST00000374426 ADIRFQ15847 76 aa8.23□□□□□ -1.09
CXCL12-202ENST00000374426 LINC00242Q5T6M2 205 aa8.23□□□□□ -1.09
CXCL12-202ENST00000374426 C2orf82Q6UX34 121 aa8.23□□□□□ -1.09
CXCL12-202ENST00000374426 AKAP14Q86UN6 197 aa8.23□□□□□ -1.09
CXCL12-202ENST00000374426 IGLV4-3A0A075B6K6 122 aa8.21□□□□□ -1.1
CXCL12-202ENST00000374426 A0A1B0GXF2 115 aa8.21□□□□□ -1.1
CXCL12-202ENST00000374426 C9JQL5 133 aa8.21□□□□□ -1.1
CXCL12-202ENST00000374426 MRPL54Q6P161 138 aaKnown RBP8.21□□□□□ -1.1
CXCL12-202ENST00000374426 NAT8Q9UHE5 227 aa8.21□□□□□ -1.1
CXCL12-202ENST00000374426 PYGO1Q9Y3Y4 419 aa8.21□□□□□ -1.1
CXCL12-202ENST00000374426 F8W036 122 aa8.2□□□□□ -1.1
CXCL12-202ENST00000374426 IFI27P40305 119 aaPredicted RBP8.2□□□□□ -1.1
CXCL12-202ENST00000374426 CARHSP1Q9Y2V2 147 aaKnown RBP8.2□□□□□ -1.1
CXCL12-202ENST00000374426 FAT4Q6V0I7 4981 aa8.19□□□□□ -1.1
CXCL12-202ENST00000374426 ZNF861PO60384 105 aa8.19□□□□□ -1.1
CXCL12-202ENST00000374426 PPBPP02775 128 aa8.19□□□□□ -1.1
CXCL12-202ENST00000374426 RAB5AP20339 215 aa8.19□□□□□ -1.1
CXCL12-202ENST00000374426 PACRGQ96M98 296 aaPredicted RBP8.19□□□□□ -1.1
CXCL12-202ENST00000374426 S100A8P05109 93 aa8.18□□□□□ -1.1
CXCL12-202ENST00000374426 TMEM141Q96I45 108 aa8.18□□□□□ -1.1
CXCL12-202ENST00000374426 SRSF3P84103 164 aaKnown RBP8.17□□□□□ -1.1
CXCL12-202ENST00000374426 ORMDL3Q8N138 153 aa8.17□□□□□ -1.1
CXCL12-202ENST00000374426 LINC01561Q8N1V8 128 aa8.17□□□□□ -1.1
CXCL12-202ENST00000374426 hCG_2014768A0A024R1R8 64 aa8.16□□□□□ -1.1
CXCL12-202ENST00000374426 ZC2HC1BQ5TFG8 222 aa8.16□□□□□ -1.1
CXCL12-202ENST00000374426 TEX43Q6ZNM6 134 aa8.16□□□□□ -1.1
CXCL12-202ENST00000374426 TMEM136Q6ZRR5 245 aa8.16□□□□□ -1.1
CXCL12-202ENST00000374426 LINC00469Q8N7U9 141 aa8.16□□□□□ -1.1
CXCL12-202ENST00000374426 PRELID3AQ96N28 172 aa8.16□□□□□ -1.1
CXCL12-202ENST00000374426 C22orf24Q9Y442 160 aa8.16□□□□□ -1.1
CXCL12-202ENST00000374426 TSPAN13O95857 204 aa8.15□□□□□ -1.1
CXCL12-202ENST00000374426 LINC00173Q6ZV60 143 aa8.15□□□□□ -1.1
CXCL12-202ENST00000374426 KRTAP9-2Q9BYQ4 174 aa8.15□□□□□ -1.1
CXCL12-202ENST00000374426 A0A0U1RQV1 116 aa8.14□□□□□ -1.11
CXCL12-202ENST00000374426 PRSS47A8MTI9 375 aa8.14□□□□□ -1.11
CXCL12-202ENST00000374426 NUPR1O60356 82 aa8.14□□□□□ -1.11
CXCL12-202ENST00000374426 C2orf88Q9BSF0 95 aa8.14□□□□□ -1.11
CXCL12-202ENST00000374426 CTDSP1Q9GZU7 261 aa8.14□□□□□ -1.11
CXCL12-202ENST00000374426 XAGE1AQ9HD64 81 aa8.14□□□□□ -1.11
CXCL12-202ENST00000374426 TOMM7Q9P0U1 55 aa8.14□□□□□ -1.11
CXCL12-202ENST00000374426 A0A087X002 238 aa8.13□□□□□ -1.11
CXCL12-202ENST00000374426 LOC389332A0A1B0GUA5 103 aa8.13□□□□□ -1.11
CXCL12-202ENST00000374426 PRSS2P07478 247 aa8.13□□□□□ -1.11
CXCL12-202ENST00000374426 CKS1BP61024 79 aa8.13□□□□□ -1.11
CXCL12-202ENST00000374426 Q6ZN92 141 aa8.13□□□□□ -1.11
CXCL12-202ENST00000374426 Q8IZM0 81 aa8.13□□□□□ -1.11
CXCL12-202ENST00000374426 AMELXQ99217 191 aa8.13□□□□□ -1.11
CXCL12-202ENST00000374426 PEA15Q15121 130 aa8.12□□□□□ -1.11
CXCL12-202ENST00000374426 LBHQ53QV2 105 aaPredicted RBP8.12□□□□□ -1.11
CXCL12-202ENST00000374426 C6orf226Q5I0X4 101 aa8.12□□□□□ -1.11
CXCL12-202ENST00000374426 C2orf66Q6UXQ4 117 aa8.12□□□□□ -1.11
CXCL12-202ENST00000374426 ATP5L2Q7Z4Y8 100 aa8.12□□□□□ -1.11
CXCL12-202ENST00000374426 CYSLTR1Q9Y271 337 aa8.12□□□□□ -1.11
CXCL12-202ENST00000374426 FAM19A3Q7Z5A8 133 aa8.11□□□□□ -1.11
CXCL12-202ENST00000374426 ALKBH7Q9BT30 221 aaPredicted RBP8.11□□□□□ -1.11
CXCL12-202ENST00000374426 VCX2Q9H322 139 aa8.11□□□□□ -1.11
CXCL12-202ENST00000374426 LAMTOR2Q9Y2Q5 125 aa8.11□□□□□ -1.11
CXCL12-202ENST00000374426 BCE1O60756 84 aa8.1□□□□□ -1.11
CXCL12-202ENST00000374426 RPL28P46779 137 aaKnown RBP8.1□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 76 ms