RNA–Protein interactions for RNA: ENST00000373115.4

CHST3-201, Transcript of carbohydrate sulfotransferase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHST3, Length 6,970 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHST3-201ENST00000373115 UBE2D2P62837 147 aa11.44□□□□□ -0.58
CHST3-201ENST00000373115 LOC107984640A0A0U1RRK4 108 aa11.44□□□□□ -0.58
CHST3-201ENST00000373115 PMAIP1Q13794 54 aa11.42□□□□□ -0.58
CHST3-201ENST00000373115 CEP192Q8TEP8 1941 aa11.42□□□□□ -0.58
CHST3-201ENST00000373115 C10orf25Q5T742 122 aa11.42□□□□□ -0.58
CHST3-201ENST00000373115 LRRC75A-AS1Q8N1F1 130 aa11.42□□□□□ -0.58
CHST3-201ENST00000373115 LY6G6CO95867 125 aa11.42□□□□□ -0.58
CHST3-201ENST00000373115 CRIP2P52943 208 aaPredicted RBP11.42□□□□□ -0.58
CHST3-201ENST00000373115 LELP1Q5T871 98 aa11.41□□□□□ -0.58
CHST3-201ENST00000373115 CREBBPQ92793 2442 aa11.41□□□□□ -0.58
CHST3-201ENST00000373115 X6R8D5 127 aa11.41□□□□□ -0.58
CHST3-201ENST00000373115 C9orf116Q5BN46 136 aaPredicted RBP11.41□□□□□ -0.58
CHST3-201ENST00000373115 Q6JHZ5 121 aa11.41□□□□□ -0.58
CHST3-201ENST00000373115 COX17Q14061 63 aa11.4□□□□□ -0.58
CHST3-201ENST00000373115 CIRBP-AS1Q8TBR5 109 aa11.4□□□□□ -0.58
CHST3-201ENST00000373115 LINC00208Q96KT6 92 aa11.4□□□□□ -0.58
CHST3-201ENST00000373115 A0A087WVE0 104 aa11.4□□□□□ -0.58
CHST3-201ENST00000373115 ATG2AQ2TAZ0 1938 aa11.4□□□□□ -0.59
CHST3-201ENST00000373115 PRR3P79522 188 aaKnown RBP11.4□□□□□ -0.59
CHST3-201ENST00000373115 ZNF702PQ9H963 129 aa11.4□□□□□ -0.59
CHST3-201ENST00000373115 SMIM26A0A096LP01 95 aa11.39□□□□□ -0.59
CHST3-201ENST00000373115 CYSRT1A8MQ03 144 aa11.39□□□□□ -0.59
CHST3-201ENST00000373115 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP11.39□□□□□ -0.59
CHST3-201ENST00000373115 ZNF843Q8N446 348 aa11.38□□□□□ -0.59
CHST3-201ENST00000373115 MRPS36P82909 103 aaKnown RBP11.38□□□□□ -0.59
CHST3-201ENST00000373115 PSPHP1O15172 72 aa11.38□□□□□ -0.59
CHST3-201ENST00000373115 A0A087WYN8 130 aa11.38□□□□□ -0.59
CHST3-201ENST00000373115 PRORYQ9H606 182 aa11.38□□□□□ -0.59
CHST3-201ENST00000373115 COX6A2Q02221 97 aa11.37□□□□□ -0.59
CHST3-201ENST00000373115 SORL1Q92673 2214 aa11.37□□□□□ -0.59
CHST3-201ENST00000373115 TRBV7-6A0A0J9YX20 115 aa11.37□□□□□ -0.59
CHST3-201ENST00000373115 TRAV7A0A075B6U4 112 aa11.37□□□□□ -0.59
CHST3-201ENST00000373115 NTM-AS1Q6ZSK4 140 aa11.37□□□□□ -0.59
CHST3-201ENST00000373115 CDC42SE2Q9NRR3 84 aa11.36□□□□□ -0.59
CHST3-201ENST00000373115 EDN2P20800 178 aa11.36□□□□□ -0.59
CHST3-201ENST00000373115 PCOTHQ58A44 107 aa11.36□□□□□ -0.59
CHST3-201ENST00000373115 LY6G6DO95868 133 aa11.36□□□□□ -0.59
CHST3-201ENST00000373115 IGHV6-1A0A0B4J1U7 121 aa11.36□□□□□ -0.59
CHST3-201ENST00000373115 POLR2KP53803 58 aaKnown RBP11.35□□□□□ -0.59
CHST3-201ENST00000373115 EXPH5Q8NEV8 1989 aa11.35□□□□□ -0.59
CHST3-201ENST00000373115 Q8N814 137 aa11.35□□□□□ -0.59
CHST3-201ENST00000373115 PTPRQQ9UMZ3 2332 aa11.35□□□□□ -0.59
CHST3-201ENST00000373115 BEAN1Q3B7T3 259 aa11.35□□□□□ -0.59
CHST3-201ENST00000373115 Q8IZM0 81 aa11.35□□□□□ -0.59
CHST3-201ENST00000373115 UNQ6190/PRO20217Q6UXQ8 127 aa11.35□□□□□ -0.59
CHST3-201ENST00000373115 PRYO14603 147 aa11.34□□□□□ -0.59
CHST3-201ENST00000373115 KLLNB2CW77 178 aa11.34□□□□□ -0.59
CHST3-201ENST00000373115 SPINK1P00995 79 aa11.34□□□□□ -0.59
CHST3-201ENST00000373115 PSMG3-AS1Q96PY0 264 aa11.34□□□□□ -0.59
CHST3-201ENST00000373115 DEFB116Q30KQ4 102 aa11.34□□□□□ -0.59
CHST3-201ENST00000373115 LINC01547P58512 204 aaPredicted RBP11.33□□□□□ -0.6
CHST3-201ENST00000373115 SHISA2Q6UWI4 295 aa11.33□□□□□ -0.6
CHST3-201ENST00000373115 C1orf137Q5JT78 98 aa11.33□□□□□ -0.6
CHST3-201ENST00000373115 C11orf71Q6IPW1 123 aa11.32□□□□□ -0.6
CHST3-201ENST00000373115 RAI1Q7Z5J4 1906 aaPredicted RBP11.32□□□□□ -0.6
CHST3-201ENST00000373115 TRBV10-3A0A0K0K1G6 114 aa11.32□□□□□ -0.6
CHST3-201ENST00000373115 REG3GQ6UW15 175 aa11.31□□□□□ -0.6
CHST3-201ENST00000373115 IGIPA6NJ69 53 aa11.31□□□□□ -0.6
CHST3-201ENST00000373115 LINC01006Q8NI28 216 aa11.3□□□□□ -0.6
CHST3-201ENST00000373115 C6orf223Q8N319 242 aa11.29□□□□□ -0.6
CHST3-201ENST00000373115 LINC00242Q5T6M2 205 aa11.29□□□□□ -0.6
CHST3-201ENST00000373115 MRGPRG-AS1Q2M3A8 158 aa11.29□□□□□ -0.6
CHST3-201ENST00000373115 FAM208BQ5VWN6 2430 aa11.29□□□□□ -0.6
CHST3-201ENST00000373115 LINC00474Q9P2X8 69 aa11.29□□□□□ -0.6
CHST3-201ENST00000373115 TSPEAR-AS2P59090 65 aa11.28□□□□□ -0.6
CHST3-201ENST00000373115 TRBV7-7A0A0K0K1E9 115 aa11.27□□□□□ -0.61
CHST3-201ENST00000373115 OXLD1Q5BKU9 147 aa11.27□□□□□ -0.61
CHST3-201ENST00000373115 CRYGAP11844 174 aa11.27□□□□□ -0.61
CHST3-201ENST00000373115 LINC00575Q6W349 94 aa11.27□□□□□ -0.61
CHST3-201ENST00000373115 Q8N6K4 173 aa11.27□□□□□ -0.61
CHST3-201ENST00000373115 ZNF580Q9UK33 172 aa11.26□□□□□ -0.61
CHST3-201ENST00000373115 IGLV4-60A0A075B6I1 120 aa11.26□□□□□ -0.61
CHST3-201ENST00000373115 ADAMTSL4-AS1Q5T5F5 129 aa11.26□□□□□ -0.61
CHST3-201ENST00000373115 SMIM1B2RUZ4 78 aa11.26□□□□□ -0.61
CHST3-201ENST00000373115 Q8N3U1 123 aa11.25□□□□□ -0.61
CHST3-201ENST00000373115 OTOGLQ3ZCN5 2332 aa11.25□□□□□ -0.61
CHST3-201ENST00000373115 H0Y9P7 68 aa11.25□□□□□ -0.61
CHST3-201ENST00000373115 PRRC2AP48634 2157 aaKnown RBP11.25□□□□□ -0.61
CHST3-201ENST00000373115 FSTL3O95633 263 aa11.24□□□□□ -0.61
CHST3-201ENST00000373115 URB1-AS1Q96HZ7 61 aa11.24□□□□□ -0.61
CHST3-201ENST00000373115 IGLV1-40P01703 118 aa11.24□□□□□ -0.61
CHST3-201ENST00000373115 CHCHD7Q9BUK0 85 aa11.24□□□□□ -0.61
CHST3-201ENST00000373115 RPL28P46779 137 aaKnown RBP11.24□□□□□ -0.61
CHST3-201ENST00000373115 SBSPONQ8IVN8 264 aa11.24□□□□□ -0.61
CHST3-201ENST00000373115 Q9BRP9 147 aa11.23□□□□□ -0.61
CHST3-201ENST00000373115 LINC00310P59036 64 aa11.23□□□□□ -0.61
CHST3-201ENST00000373115 A8MTW9 85 aa11.22□□□□□ -0.61
CHST3-201ENST00000373115 LINC01556Q5JQF7 62 aa11.21□□□□□ -0.61
CHST3-201ENST00000373115 Q9UF83 564 aa11.21□□□□□ -0.61
CHST3-201ENST00000373115 HIVEP2P31629 2446 aa11.21□□□□□ -0.61
CHST3-201ENST00000373115 BRI3O95415 125 aa11.21□□□□□ -0.61
CHST3-201ENST00000373115 TET2Q6N021 2002 aaPredicted RBP11.21□□□□□ -0.62
CHST3-201ENST00000373115 AGRNO00468 2067 aa11.2□□□□□ -0.62
CHST3-201ENST00000373115 MUC6Q6W4X9 2439 aa11.2□□□□□ -0.62
CHST3-201ENST00000373115 IGLV5-52A0A0A0MRZ9 124 aa11.19□□□□□ -0.62
CHST3-201ENST00000373115 SMR3AQ99954 134 aa11.19□□□□□ -0.62
CHST3-201ENST00000373115 CNFNQ9BYD5 112 aa11.19□□□□□ -0.62
CHST3-201ENST00000373115 EGFEM1PQ0D2K5 195 aa11.19□□□□□ -0.62
CHST3-201ENST00000373115 NUPR2A6NF83 97 aa11.18□□□□□ -0.62
CHST3-201ENST00000373115 ZFHX2Q9C0A1 2572 aaPredicted RBP11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 78.4 ms