RNA–Protein interactions for RNA: ENST00000372189.7

RAPGEF1-201, Transcript of Rap guanine nucleotide exchange factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RAPGEF1, Length 6,085 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF1-201ENST00000372189 CFAP126Q5VTH2 177 aa9.86□□□□□ -0.83
RAPGEF1-201ENST00000372189 LINC00308Q8TCZ7 52 aa9.86□□□□□ -0.83
RAPGEF1-201ENST00000372189 H7C423 109 aa9.85□□□□□ -0.83
RAPGEF1-201ENST00000372189 IGLV1-40P01703 118 aa9.85□□□□□ -0.83
RAPGEF1-201ENST00000372189 Q6ZS46 218 aa9.85□□□□□ -0.83
RAPGEF1-201ENST00000372189 LINC00467Q9BRT7 94 aa9.85□□□□□ -0.83
RAPGEF1-201ENST00000372189 ZNF73O43830 326 aaPredicted RBP9.85□□□□□ -0.83
RAPGEF1-201ENST00000372189 NOTCH2Q04721 2471 aa9.85□□□□□ -0.83
RAPGEF1-201ENST00000372189 UFSP1Q6NVU6 142 aa9.85□□□□□ -0.83
RAPGEF1-201ENST00000372189 CDKN2A-AS1Q9UH64 79 aa9.85□□□□□ -0.83
RAPGEF1-201ENST00000372189 PLCE1Q9P212 2302 aa9.84□□□□□ -0.83
RAPGEF1-201ENST00000372189 SPG11Q96JI7 2443 aa9.83□□□□□ -0.84
RAPGEF1-201ENST00000372189 TRAV10A0A0B4J240 114 aa9.83□□□□□ -0.84
RAPGEF1-201ENST00000372189 IGLV2-11P01706 119 aa9.83□□□□□ -0.84
RAPGEF1-201ENST00000372189 C6orf99Q4VX62 202 aa9.82□□□□□ -0.84
RAPGEF1-201ENST00000372189 KTN1-AS1Q86SY8 53 aa9.82□□□□□ -0.84
RAPGEF1-201ENST00000372189 PTPN13Q12923 2485 aa9.82□□□□□ -0.84
RAPGEF1-201ENST00000372189 IBA57-AS1B1ANH7 110 aa9.82□□□□□ -0.84
RAPGEF1-201ENST00000372189 M0QY20 66 aa9.81□□□□□ -0.84
RAPGEF1-201ENST00000372189 REG3AQ06141 175 aa9.81□□□□□ -0.84
RAPGEF1-201ENST00000372189 CRYGAP11844 174 aa9.81□□□□□ -0.84
RAPGEF1-201ENST00000372189 NCOR2Q9Y618 2525 aa9.81□□□□□ -0.84
RAPGEF1-201ENST00000372189 BBC3Q96PG8 261 aaPredicted RBP9.8□□□□□ -0.84
RAPGEF1-201ENST00000372189 PIEZO1Q92508 2521 aa9.8□□□□□ -0.84
RAPGEF1-201ENST00000372189 NACAE9PAV3 2078 aa9.8□□□□□ -0.84
RAPGEF1-201ENST00000372189 TRBV6-5A0A0K0K1A5 114 aa9.79□□□□□ -0.84
RAPGEF1-201ENST00000372189 A0A1W2PPR1 153 aa9.79□□□□□ -0.84
RAPGEF1-201ENST00000372189 HCG22E2RYF7 251 aa9.79□□□□□ -0.84
RAPGEF1-201ENST00000372189 SLPIP03973 132 aa9.79□□□□□ -0.84
RAPGEF1-201ENST00000372189 C7orf65Q6ZTY9 151 aa9.78□□□□□ -0.84
RAPGEF1-201ENST00000372189 CACNA1AO00555 2505 aa9.77□□□□□ -0.85
RAPGEF1-201ENST00000372189 WFDC13Q8IUB5 93 aa9.77□□□□□ -0.85
RAPGEF1-201ENST00000372189 IGHV4-30-4P0DP06 118 aa9.77□□□□□ -0.85
RAPGEF1-201ENST00000372189 IGKV2-24A0A0C4DH68 120 aa9.77□□□□□ -0.85
RAPGEF1-201ENST00000372189 TRBV6-4A0A1B0GX49 114 aa9.77□□□□□ -0.85
RAPGEF1-201ENST00000372189 LST1O00453 97 aa9.77□□□□□ -0.85
RAPGEF1-201ENST00000372189 CHCHD10Q8WYQ3 142 aaPredicted RBP9.77□□□□□ -0.85
RAPGEF1-201ENST00000372189 PLA2G1BP04054 148 aaKnown RBP9.76□□□□□ -0.85
RAPGEF1-201ENST00000372189 CSPG4Q6UVK1 2322 aa9.76□□□□□ -0.85
RAPGEF1-201ENST00000372189 C16orf95Q9H693 158 aa9.75□□□□□ -0.85
RAPGEF1-201ENST00000372189 UBE2D1P51668 147 aa9.75□□□□□ -0.85
RAPGEF1-201ENST00000372189 B9D2Q9BPU9 175 aa9.75□□□□□ -0.85
RAPGEF1-201ENST00000372189 IGF2RP11717 2491 aa9.75□□□□□ -0.85
RAPGEF1-201ENST00000372189 LINC00208Q96KT6 92 aa9.75□□□□□ -0.85
RAPGEF1-201ENST00000372189 TSHBP01222 138 aa9.74□□□□□ -0.85
RAPGEF1-201ENST00000372189 LINC01554Q52M75 96 aa9.73□□□□□ -0.85
RAPGEF1-201ENST00000372189 TRBV6-8A0A0A6YYG3 113 aa9.73□□□□□ -0.85
RAPGEF1-201ENST00000372189 LINC00310P59036 64 aa9.73□□□□□ -0.85
RAPGEF1-201ENST00000372189 A0A087WZ39 114 aa9.73□□□□□ -0.85
RAPGEF1-201ENST00000372189 KIAA1549Q9HCM3 1950 aa9.73□□□□□ -0.85
RAPGEF1-201ENST00000372189 KPRPQ5T749 579 aaPredicted RBP9.72□□□□□ -0.85
RAPGEF1-201ENST00000372189 Q6ZVQ6 151 aa9.72□□□□□ -0.85
RAPGEF1-201ENST00000372189 HIGD2AQ9BW72 106 aa9.72□□□□□ -0.85
RAPGEF1-201ENST00000372189 DCANP1Q8TF63 244 aa9.72□□□□□ -0.85
RAPGEF1-201ENST00000372189 LY6G6CO95867 125 aa9.71□□□□□ -0.85
RAPGEF1-201ENST00000372189 A0A087WVE0 104 aa9.71□□□□□ -0.85
RAPGEF1-201ENST00000372189 CCKP06307 115 aa9.71□□□□□ -0.85
RAPGEF1-201ENST00000372189 ADAMTS20P59510 1910 aa9.71□□□□□ -0.86
RAPGEF1-201ENST00000372189 PRRC2AP48634 2157 aaKnown RBP9.71□□□□□ -0.86
RAPGEF1-201ENST00000372189 IGLV2-18A0A075B6J9 118 aa9.71□□□□□ -0.86
RAPGEF1-201ENST00000372189 PRR14LQ5THK1 2151 aa9.7□□□□□ -0.86
RAPGEF1-201ENST00000372189 PROK1P58294 105 aa9.7□□□□□ -0.86
RAPGEF1-201ENST00000372189 ATRXP46100 2492 aa9.7□□□□□ -0.86
RAPGEF1-201ENST00000372189 POLR2KP53803 58 aaKnown RBP9.7□□□□□ -0.86
RAPGEF1-201ENST00000372189 C11orf21Q9P2W6 132 aa9.7□□□□□ -0.86
RAPGEF1-201ENST00000372189 NAV2Q8IVL1 2488 aa9.7□□□□□ -0.86
RAPGEF1-201ENST00000372189 WIPF1O43516 503 aa9.7□□□□□ -0.86
RAPGEF1-201ENST00000372189 CNFNQ9BYD5 112 aa9.7□□□□□ -0.86
RAPGEF1-201ENST00000372189 A0A1B0GU69 56 aa9.69□□□□□ -0.86
RAPGEF1-201ENST00000372189 M0R2N4 97 aa9.69□□□□□ -0.86
RAPGEF1-201ENST00000372189 LINC01561Q8N1V8 128 aa9.69□□□□□ -0.86
RAPGEF1-201ENST00000372189 CRIP2P52943 208 aaPredicted RBP9.69□□□□□ -0.86
RAPGEF1-201ENST00000372189 ERC2-IT1O76042 136 aa9.69□□□□□ -0.86
RAPGEF1-201ENST00000372189 ATP11AUNQ6ZP68 121 aa9.69□□□□□ -0.86
RAPGEF1-201ENST00000372189 POM121L12Q8N7R1 296 aa9.69□□□□□ -0.86
RAPGEF1-201ENST00000372189 SSBP3-AS1Q7Z2R9 100 aa9.68□□□□□ -0.86
RAPGEF1-201ENST00000372189 PRR9Q5T870 116 aa9.68□□□□□ -0.86
RAPGEF1-201ENST00000372189 URB1-AS1Q96HZ7 61 aa9.68□□□□□ -0.86
RAPGEF1-201ENST00000372189 IGLV2-33A0A075B6J2 118 aaPredicted RBP9.68□□□□□ -0.86
RAPGEF1-201ENST00000372189 KLLNB2CW77 178 aa9.68□□□□□ -0.86
RAPGEF1-201ENST00000372189 UBE2D3P61077 147 aa9.67□□□□□ -0.86
RAPGEF1-201ENST00000372189 GAS8-AS1O95177 125 aa9.67□□□□□ -0.86
RAPGEF1-201ENST00000372189 RAI1Q7Z5J4 1906 aaPredicted RBP9.67□□□□□ -0.86
RAPGEF1-201ENST00000372189 IGLV1-51P01701 117 aa9.66□□□□□ -0.86
RAPGEF1-201ENST00000372189 SMIM11BQ8TCY0 68 aa9.66□□□□□ -0.86
RAPGEF1-201ENST00000372189 C3orf84H3BNL1 204 aa9.66□□□□□ -0.86
RAPGEF1-201ENST00000372189 LELP1Q5T871 98 aa9.66□□□□□ -0.86
RAPGEF1-201ENST00000372189 CPAMD8Q8IZJ3 1885 aa9.65□□□□□ -0.86
RAPGEF1-201ENST00000372189 NUPR2A6NF83 97 aa9.65□□□□□ -0.86
RAPGEF1-201ENST00000372189 HIVEP3Q5T1R4 2406 aa9.65□□□□□ -0.87
RAPGEF1-201ENST00000372189 FAM19A1Q7Z5A9 133 aa9.65□□□□□ -0.87
RAPGEF1-201ENST00000372189 COL4A2P08572 1712 aa9.64□□□□□ -0.87
RAPGEF1-201ENST00000372189 ODF3L2Q3SX64 289 aa9.64□□□□□ -0.87
RAPGEF1-201ENST00000372189 ZNF580Q9UK33 172 aa9.64□□□□□ -0.87
RAPGEF1-201ENST00000372189 IGIPA6NJ69 53 aa9.64□□□□□ -0.87
RAPGEF1-201ENST00000372189 LOC100131303A0A0U1RQF7 123 aa9.64□□□□□ -0.87
RAPGEF1-201ENST00000372189 XAGE1AQ9HD64 81 aa9.64□□□□□ -0.87
RAPGEF1-201ENST00000372189 C7orf33Q8WU49 177 aa9.64□□□□□ -0.87
RAPGEF1-201ENST00000372189 SYCNQ0VAF6 134 aa9.63□□□□□ -0.87
RAPGEF1-201ENST00000372189 BRI3O95415 125 aa9.62□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 88 ms