RNA–Protein interactions for RNA: ENST00000368843.7

SNX27-203, Transcript of sorting nexin family member 27, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SNX27, Length 7,197 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX27-203ENST00000368843 PRR15LQ9BU68 103 aa13.09□□□□□ -0.31
SNX27-203ENST00000368843 MRPS12O15235 138 aaKnown RBP13.09□□□□□ -0.31
SNX27-203ENST00000368843 NRACQ8N912 160 aa13.08□□□□□ -0.32
SNX27-203ENST00000368843 KLLNB2CW77 178 aa13.08□□□□□ -0.32
SNX27-203ENST00000368843 CIRBP-AS1Q8TBR5 109 aa13.07□□□□□ -0.32
SNX27-203ENST00000368843 EXPH5Q8NEV8 1989 aa13.07□□□□□ -0.32
SNX27-203ENST00000368843 SMIM11BQ8TCY0 68 aa13.07□□□□□ -0.32
SNX27-203ENST00000368843 M0QXV9 152 aa13.07□□□□□ -0.32
SNX27-203ENST00000368843 C10orf25Q5T742 122 aa13.07□□□□□ -0.32
SNX27-203ENST00000368843 TRBV30A0A0K0K1B3 111 aa13.06□□□□□ -0.32
SNX27-203ENST00000368843 ATG2AQ2TAZ0 1938 aa13.06□□□□□ -0.32
SNX27-203ENST00000368843 COL5A1P20908 1838 aaPredicted RBP13.06□□□□□ -0.32
SNX27-203ENST00000368843 ATP5EP2Q5VTU8 51 aa13.06□□□□□ -0.32
SNX27-203ENST00000368843 COX17Q14061 63 aa13.06□□□□□ -0.32
SNX27-203ENST00000368843 C11orf21Q9P2W6 132 aa13.06□□□□□ -0.32
SNX27-203ENST00000368843 LRP4O75096 1905 aa13.05□□□□□ -0.32
SNX27-203ENST00000368843 GAS8-AS1O95177 125 aa13.05□□□□□ -0.32
SNX27-203ENST00000368843 MUC22E2RYF6 1773 aaPredicted RBP13.05□□□□□ -0.32
SNX27-203ENST00000368843 X6R8D5 127 aa13.05□□□□□ -0.32
SNX27-203ENST00000368843 CYSRT1A8MQ03 144 aa13.04□□□□□ -0.32
SNX27-203ENST00000368843 NDUFC2-KCTD14E9PQ53 114 aa13.03□□□□□ -0.32
SNX27-203ENST00000368843 ZNF73O43830 326 aaPredicted RBP13.03□□□□□ -0.32
SNX27-203ENST00000368843 MRPS36P82909 103 aaKnown RBP13.03□□□□□ -0.32
SNX27-203ENST00000368843 CELA1Q9UNI1 258 aa13.03□□□□□ -0.32
SNX27-203ENST00000368843 TIMM17BO60830 172 aa13.02□□□□□ -0.32
SNX27-203ENST00000368843 SERP1Q9Y6X1 66 aa13.02□□□□□ -0.32
SNX27-203ENST00000368843 A6NED7 52 aa13.02□□□□□ -0.33
SNX27-203ENST00000368843 ARHGAP32A7KAX9 2087 aa13.02□□□□□ -0.33
SNX27-203ENST00000368843 RPL28P46779 137 aaKnown RBP13.01□□□□□ -0.33
SNX27-203ENST00000368843 EML5Q05BV3 1969 aa13.01□□□□□ -0.33
SNX27-203ENST00000368843 C9orf116Q5BN46 136 aaPredicted RBP13.01□□□□□ -0.33
SNX27-203ENST00000368843 CDC42SE2Q9NRR3 84 aa13□□□□□ -0.33
SNX27-203ENST00000368843 Q8IZM0 81 aa13□□□□□ -0.33
SNX27-203ENST00000368843 CRIP2P52943 208 aaPredicted RBP13□□□□□ -0.33
SNX27-203ENST00000368843 MRPL55Q7Z7F7 128 aaKnown RBP13□□□□□ -0.33
SNX27-203ENST00000368843 PLXNB1O43157 2135 aa12.99□□□□□ -0.33
SNX27-203ENST00000368843 Q6ZTC4 211 aa12.99□□□□□ -0.33
SNX27-203ENST00000368843 C6orf223Q8N319 242 aa12.99□□□□□ -0.33
SNX27-203ENST00000368843 REG3GQ6UW15 175 aa12.99□□□□□ -0.33
SNX27-203ENST00000368843 ODF3L2Q3SX64 289 aa12.98□□□□□ -0.33
SNX27-203ENST00000368843 Q6ZVQ6 151 aa12.98□□□□□ -0.33
SNX27-203ENST00000368843 CPAMD8Q8IZJ3 1885 aa12.98□□□□□ -0.33
SNX27-203ENST00000368843 FAM240AA0A1B0GVK7 77 aa12.97□□□□□ -0.33
SNX27-203ENST00000368843 UQCRQO14949 82 aa12.97□□□□□ -0.33
SNX27-203ENST00000368843 ATRXP46100 2492 aa12.97□□□□□ -0.33
SNX27-203ENST00000368843 PRR3P79522 188 aaKnown RBP12.97□□□□□ -0.33
SNX27-203ENST00000368843 UNQ6190/PRO20217Q6UXQ8 127 aa12.97□□□□□ -0.33
SNX27-203ENST00000368843 CCDC179H3BU77 68 aa12.97□□□□□ -0.33
SNX27-203ENST00000368843 Q8N9L7 120 aa12.97□□□□□ -0.33
SNX27-203ENST00000368843 SORL1Q92673 2214 aa12.96□□□□□ -0.33
SNX27-203ENST00000368843 LINC01556Q5JQF7 62 aa12.95□□□□□ -0.34
SNX27-203ENST00000368843 PTPRSQ13332 1948 aa12.95□□□□□ -0.34
SNX27-203ENST00000368843 PTPN13Q12923 2485 aa12.95□□□□□ -0.34
SNX27-203ENST00000368843 POLR2KP53803 58 aaKnown RBP12.94□□□□□ -0.34
SNX27-203ENST00000368843 DEFB116Q30KQ4 102 aa12.94□□□□□ -0.34
SNX27-203ENST00000368843 IGLV1-51P01701 117 aa12.94□□□□□ -0.34
SNX27-203ENST00000368843 ESRGQ1W209 222 aa12.94□□□□□ -0.34
SNX27-203ENST00000368843 SRCAPQ6ZRS2 3230 aa12.94□□□□□ -0.34
SNX27-203ENST00000368843 PRRC2AP48634 2157 aaKnown RBP12.94□□□□□ -0.34
SNX27-203ENST00000368843 C1orf137Q5JT78 98 aa12.94□□□□□ -0.34
SNX27-203ENST00000368843 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP12.93□□□□□ -0.34
SNX27-203ENST00000368843 FAM19A3Q7Z5A8 133 aa12.93□□□□□ -0.34
SNX27-203ENST00000368843 ADAMTS20P59510 1910 aa12.93□□□□□ -0.34
SNX27-203ENST00000368843 C1orf134Q5TEV5 83 aa12.93□□□□□ -0.34
SNX27-203ENST00000368843 BDP1A6H8Y1 2624 aa12.92□□□□□ -0.34
SNX27-203ENST00000368843 SPINK1P00995 79 aa12.92□□□□□ -0.34
SNX27-203ENST00000368843 C16orf95Q9H693 158 aa12.92□□□□□ -0.34
SNX27-203ENST00000368843 COX6A2Q02221 97 aa12.91□□□□□ -0.34
SNX27-203ENST00000368843 FSHBP01225 129 aa12.91□□□□□ -0.34
SNX27-203ENST00000368843 IGHV6-1A0A0B4J1U7 121 aa12.89□□□□□ -0.35
SNX27-203ENST00000368843 LST1O00453 97 aa12.89□□□□□ -0.35
SNX27-203ENST00000368843 IGLV4-60A0A075B6I1 120 aa12.89□□□□□ -0.35
SNX27-203ENST00000368843 FHL2Q14192 279 aa12.89□□□□□ -0.35
SNX27-203ENST00000368843 SOSTDC1Q6X4U4 206 aa12.89□□□□□ -0.35
SNX27-203ENST00000368843 EGFEM1PQ0D2K5 195 aa12.88□□□□□ -0.35
SNX27-203ENST00000368843 TRBV10-3A0A0K0K1G6 114 aa12.88□□□□□ -0.35
SNX27-203ENST00000368843 CSPG4Q6UVK1 2322 aa12.88□□□□□ -0.35
SNX27-203ENST00000368843 SPG11Q96JI7 2443 aa12.88□□□□□ -0.35
SNX27-203ENST00000368843 ANKHD1Q8IWZ3 2542 aaKnown RBP12.88□□□□□ -0.35
SNX27-203ENST00000368843 Q6Q795 121 aa12.88□□□□□ -0.35
SNX27-203ENST00000368843 CUL9Q8IWT3 2517 aa12.87□□□□□ -0.35
SNX27-203ENST00000368843 LINC00242Q5T6M2 205 aa12.87□□□□□ -0.35
SNX27-203ENST00000368843 TET2Q6N021 2002 aaPredicted RBP12.87□□□□□ -0.35
SNX27-203ENST00000368843 V9GYY9 64 aa12.86□□□□□ -0.35
SNX27-203ENST00000368843 PCOTHQ58A44 107 aa12.86□□□□□ -0.35
SNX27-203ENST00000368843 MUC7Q8TAX7 377 aa12.85□□□□□ -0.35
SNX27-203ENST00000368843 LINC00694P0DN24 101 aa12.85□□□□□ -0.35
SNX27-203ENST00000368843 CHCHD7Q9BUK0 85 aa12.85□□□□□ -0.35
SNX27-203ENST00000368843 C2orf91Q6ZV80 131 aa12.84□□□□□ -0.35
SNX27-203ENST00000368843 A0A087WYN8 130 aa12.84□□□□□ -0.35
SNX27-203ENST00000368843 NDUFC1O43677 76 aa12.84□□□□□ -0.35
SNX27-203ENST00000368843 IGIPA6NJ69 53 aa12.83□□□□□ -0.36
SNX27-203ENST00000368843 Q9BRP9 147 aa12.83□□□□□ -0.36
SNX27-203ENST00000368843 ATP5EP56381 51 aaPredicted RBP12.82□□□□□ -0.36
SNX27-203ENST00000368843 HIVEP3Q5T1R4 2406 aa12.82□□□□□ -0.36
SNX27-203ENST00000368843 A0A087WVE0 104 aa12.82□□□□□ -0.36
SNX27-203ENST00000368843 Q8N814 137 aa12.82□□□□□ -0.36
SNX27-203ENST00000368843 SMIM1B2RUZ4 78 aa12.81□□□□□ -0.36
SNX27-203ENST00000368843 SERP2Q8N6R1 65 aa12.81□□□□□ -0.36
SNX27-203ENST00000368843 A0A1W2PPR1 153 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 190.8 ms