RNA–Protein interactions for RNA: ENST00000368533.7

TPM3-212, Transcript of tropomyosin 3, humanhuman

TSL 1 (best) BASIC

Gene TPM3, Length 3,131 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-212ENST00000368533 C5orf47Q569G3 176 aa7.67□□□□□ -1.18
TPM3-212ENST00000368533 SPXQ9BT56 116 aa7.67□□□□□ -1.18
TPM3-212ENST00000368533 TMEM126AQ9H061 195 aa7.67□□□□□ -1.18
TPM3-212ENST00000368533 MGAM2Q2M2H8 2515 aa7.67□□□□□ -1.18
TPM3-212ENST00000368533 ANK2Q01484 3957 aa7.67□□□□□ -1.18
TPM3-212ENST00000368533 TRAV25A0A0B4J276 109 aa7.67□□□□□ -1.18
TPM3-212ENST00000368533 H7C423 109 aa7.67□□□□□ -1.18
TPM3-212ENST00000368533 RS1O15537 224 aa7.67□□□□□ -1.18
TPM3-212ENST00000368533 C19orf73Q9NVV2 129 aa7.67□□□□□ -1.18
TPM3-212ENST00000368533 DEFB4AO15263 64 aa7.67□□□□□ -1.18
TPM3-212ENST00000368533 C20orf203Q8NBC4 194 aa7.67□□□□□ -1.18
TPM3-212ENST00000368533 RHOHQ15669 191 aa7.66□□□□□ -1.18
TPM3-212ENST00000368533 NBEAL1Q6ZS30 2694 aa7.66□□□□□ -1.18
TPM3-212ENST00000368533 IGHV3-38A0A0C4DH36 116 aa7.66□□□□□ -1.18
TPM3-212ENST00000368533 TRBV10-2A0A0K0K1G8 114 aa7.66□□□□□ -1.18
TPM3-212ENST00000368533 GIG44P09565 113 aaPredicted RBP7.66□□□□□ -1.18
TPM3-212ENST00000368533 DNAJC30Q96LL9 226 aa7.66□□□□□ -1.18
TPM3-212ENST00000368533 AMELXQ99217 191 aa7.66□□□□□ -1.18
TPM3-212ENST00000368533 TRGV1A0A0A0MS02 117 aa7.65□□□□□ -1.18
TPM3-212ENST00000368533 TRAV8-3A0A0A6YYJ7 113 aa7.65□□□□□ -1.19
TPM3-212ENST00000368533 BEAN1Q3B7T3 259 aa7.65□□□□□ -1.19
TPM3-212ENST00000368533 CYSTM1Q9H1C7 97 aa7.65□□□□□ -1.19
TPM3-212ENST00000368533 NOP10Q9NPE3 64 aaKnown RBP7.64□□□□□ -1.19
TPM3-212ENST00000368533 IGLV4-3A0A075B6K6 122 aa7.64□□□□□ -1.19
TPM3-212ENST00000368533 PRB2P02812 416 aaPredicted RBP7.64□□□□□ -1.19
TPM3-212ENST00000368533 RPL13AP40429 203 aaKnown RBP7.64□□□□□ -1.19
TPM3-212ENST00000368533 Q6ZSN1 163 aa7.64□□□□□ -1.19
TPM3-212ENST00000368533 Q6ZTI0 123 aa7.64□□□□□ -1.19
TPM3-212ENST00000368533 IGKV2D-29A0A075B6S2 120 aaPredicted RBP7.63□□□□□ -1.19
TPM3-212ENST00000368533 IGKV2-29A2NJV5 120 aaPredicted RBP7.63□□□□□ -1.19
TPM3-212ENST00000368533 M0R2P5 195 aa7.63□□□□□ -1.19
TPM3-212ENST00000368533 ZNF415Q09FC8 603 aa7.63□□□□□ -1.19
TPM3-212ENST00000368533 SMCR5Q8TEV8 140 aa7.63□□□□□ -1.19
TPM3-212ENST00000368533 TMEM101Q96IK0 257 aa7.63□□□□□ -1.19
TPM3-212ENST00000368533 DGAT2L7PQ6IED9 249 aa7.63□□□□□ -1.19
TPM3-212ENST00000368533 KIR2DL5BQ8NHK3 375 aa7.63□□□□□ -1.19
TPM3-212ENST00000368533 TMEM223A0PJW6 202 aa7.62□□□□□ -1.19
TPM3-212ENST00000368533 LEPROTO15243 131 aa7.62□□□□□ -1.19
TPM3-212ENST00000368533 DEFB135Q30KP9 77 aa7.62□□□□□ -1.19
TPM3-212ENST00000368533 C9orf66Q5T8R8 295 aa7.62□□□□□ -1.19
TPM3-212ENST00000368533 C3orf22Q8N5N4 141 aa7.62□□□□□ -1.19
TPM3-212ENST00000368533 C11orf72Q8NBR9 251 aa7.62□□□□□ -1.19
TPM3-212ENST00000368533 TIMM21Q9BVV7 248 aa7.62□□□□□ -1.19
TPM3-212ENST00000368533 hADV29S1A0JD25 119 aa7.61□□□□□ -1.19
TPM3-212ENST00000368533 A8MTW9 85 aa7.61□□□□□ -1.19
TPM3-212ENST00000368533 A8MZ25 164 aa7.61□□□□□ -1.19
TPM3-212ENST00000368533 DAND5Q8N907 189 aa7.61□□□□□ -1.19
TPM3-212ENST00000368533 CMYA5Q8N3K9 4069 aa7.61□□□□□ -1.19
TPM3-212ENST00000368533 DEFB130BP0DP73 79 aa7.6□□□□□ -1.19
TPM3-212ENST00000368533 DEFB130AP0DP74 79 aa7.6□□□□□ -1.19
TPM3-212ENST00000368533 ICOSQ9Y6W8 199 aa7.6□□□□□ -1.19
TPM3-212ENST00000368533 IGHV3-30-3P0DP02 117 aa7.6□□□□□ -1.19
TPM3-212ENST00000368533 ADAMTSL4-AS1Q5T5F5 129 aa7.6□□□□□ -1.19
TPM3-212ENST00000368533 TENM3Q9P273 2699 aa7.59□□□□□ -1.19
TPM3-212ENST00000368533 TRBV7-7A0A0K0K1E9 115 aa7.59□□□□□ -1.19
TPM3-212ENST00000368533 J3KT08 172 aa7.59□□□□□ -1.19
TPM3-212ENST00000368533 C4orf26Q17RF5 130 aa7.59□□□□□ -1.19
TPM3-212ENST00000368533 A0A0B4J2C4 111 aa7.59□□□□□ -1.19
TPM3-212ENST00000368533 TRGV2A0A075B6R0 118 aa7.58□□□□□ -1.2
TPM3-212ENST00000368533 GAGE2AQ6NT46 116 aa7.58□□□□□ -1.2
TPM3-212ENST00000368533 LINC00467Q9BRT7 94 aa7.58□□□□□ -1.2
TPM3-212ENST00000368533 DSCR8Q96T75 97 aa7.58□□□□□ -1.2
TPM3-212ENST00000368533 NDUFA12Q9UI09 145 aa7.58□□□□□ -1.2
TPM3-212ENST00000368533 A0A0J9YXY3 114 aa7.57□□□□□ -1.2
TPM3-212ENST00000368533 TRBV30A0A0K0K1B3 111 aa7.57□□□□□ -1.2
TPM3-212ENST00000368533 A0A0U1RRA0 63 aa7.57□□□□□ -1.2
TPM3-212ENST00000368533 HRCT1Q6UXD1 115 aa7.57□□□□□ -1.2
TPM3-212ENST00000368533 CSNK1G2-AS1Q8NCQ2 148 aa7.57□□□□□ -1.2
TPM3-212ENST00000368533 UQCRQO14949 82 aa7.57□□□□□ -1.2
TPM3-212ENST00000368533 LOC100131303A0A0U1RQF7 123 aa7.56□□□□□ -1.2
TPM3-212ENST00000368533 KRTAP10-11P60412 298 aa7.56□□□□□ -1.2
TPM3-212ENST00000368533 OXTP01178 125 aa7.56□□□□□ -1.2
TPM3-212ENST00000368533 LINC00526Q96FQ7 95 aa7.56□□□□□ -1.2
TPM3-212ENST00000368533 RETNQ9HD89 108 aa7.56□□□□□ -1.2
TPM3-212ENST00000368533 SPANXA1Q9NS26 97 aa7.56□□□□□ -1.2
TPM3-212ENST00000368533 TRAV16A0A0A6YYK6 109 aaPredicted RBP7.56□□□□□ -1.2
TPM3-212ENST00000368533 TRAV13-1A0A0B4J241 112 aa7.56□□□□□ -1.2
TPM3-212ENST00000368533 IGHV4-30-4P0DP06 118 aa7.56□□□□□ -1.2
TPM3-212ENST00000368533 ZNF625Q96I27 306 aaPredicted RBP7.56□□□□□ -1.2
TPM3-212ENST00000368533 PYGO1Q9Y3Y4 419 aa7.56□□□□□ -1.2
TPM3-212ENST00000368533 CHCHD7Q9BUK0 85 aa7.55□□□□□ -1.2
TPM3-212ENST00000368533 PLAC8L1A1L4L8 177 aa7.55□□□□□ -1.2
TPM3-212ENST00000368533 UBE2D4Q9Y2X8 147 aa7.55□□□□□ -1.2
TPM3-212ENST00000368533 IGHV1-58A0A0C4DH39 117 aa7.54□□□□□ -1.2
TPM3-212ENST00000368533 COX6CP09669 75 aa7.54□□□□□ -1.2
TPM3-212ENST00000368533 MRPS36P82909 103 aaKnown RBP7.54□□□□□ -1.2
TPM3-212ENST00000368533 A0A096LPF7 62 aa7.54□□□□□ -1.2
TPM3-212ENST00000368533 H3BT86 120 aa7.54□□□□□ -1.2
TPM3-212ENST00000368533 CMC4P56277 68 aaPredicted RBP7.54□□□□□ -1.2
TPM3-212ENST00000368533 CDKN2A-AS1Q9UH64 79 aa7.54□□□□□ -1.2
TPM3-212ENST00000368533 LST1O00453 97 aa7.54□□□□□ -1.2
TPM3-212ENST00000368533 F5H768 121 aa7.53□□□□□ -1.2
TPM3-212ENST00000368533 HTN3P15516 51 aa7.53□□□□□ -1.2
TPM3-212ENST00000368533 COX7CP15954 63 aa7.53□□□□□ -1.2
TPM3-212ENST00000368533 SDIM1Q6ZPB5 146 aa7.53□□□□□ -1.2
TPM3-212ENST00000368533 WFDC9Q8NEX5 89 aa7.53□□□□□ -1.2
TPM3-212ENST00000368533 OR13C6PQ8NH95 151 aa7.53□□□□□ -1.2
TPM3-212ENST00000368533 FAM104AQ969W3 186 aa7.53□□□□□ -1.2
TPM3-212ENST00000368533 IGKV3OR2-268A0A0C4DH90 116 aa7.52□□□□□ -1.21
TPM3-212ENST00000368533 FAM240AA0A1B0GVK7 77 aa7.52□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 189.6 ms