RNA–Protein interactions for RNA: ENST00000368530.6

TPM3-210, Transcript of tropomyosin 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TPM3, Length 1,523 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-210ENST00000368530 TRAV26-1A0A087WT03 109 aa6.85□□□□□ -1.31
TPM3-210ENST00000368530 GAGE6Q13070 117 aa6.85□□□□□ -1.31
TPM3-210ENST00000368530 TMEM170BQ5T4T1 132 aa6.85□□□□□ -1.31
TPM3-210ENST00000368530 AMMECR1LQ6DCA0 310 aa6.85□□□□□ -1.31
TPM3-210ENST00000368530 VSIG2Q96IQ7 327 aa6.85□□□□□ -1.31
TPM3-210ENST00000368530 AMELXQ99217 191 aa6.85□□□□□ -1.31
TPM3-210ENST00000368530 SNHG12Q9BXW3 62 aa6.85□□□□□ -1.31
TPM3-210ENST00000368530 GTSF1LQ9H1H1 148 aa6.85□□□□□ -1.31
TPM3-210ENST00000368530 TRBV6-8A0A0A6YYG3 113 aa6.84□□□□□ -1.31
TPM3-210ENST00000368530 TRAV8-6A0A0B4J262 113 aa6.84□□□□□ -1.31
TPM3-210ENST00000368530 M0R143 59 aa6.84□□□□□ -1.31
TPM3-210ENST00000368530 BOD1L2Q8IYS8 172 aa6.84□□□□□ -1.31
TPM3-210ENST00000368530 C2orf88Q9BSF0 95 aa6.84□□□□□ -1.31
TPM3-210ENST00000368530 CHCHD5Q9BSY4 110 aa6.84□□□□□ -1.31
TPM3-210ENST00000368530 TIMM21Q9BVV7 248 aa6.84□□□□□ -1.31
TPM3-210ENST00000368530 MRPS16Q9Y3D3 137 aaKnown RBP6.84□□□□□ -1.31
TPM3-210ENST00000368530 HINT1P49773 126 aaPredicted RBP6.83□□□□□ -1.32
TPM3-210ENST00000368530 TMEM97Q5BJF2 176 aa6.83□□□□□ -1.32
TPM3-210ENST00000368530 C1orf134Q5TEV5 83 aa6.83□□□□□ -1.32
TPM3-210ENST00000368530 C2orf91Q6ZV80 131 aa6.83□□□□□ -1.32
TPM3-210ENST00000368530 UBE2DNLQ8IWF7 75 aa6.83□□□□□ -1.32
TPM3-210ENST00000368530 OR5A1Q8NGJ0 315 aa6.83□□□□□ -1.32
TPM3-210ENST00000368530 TEX48A0A1B0GUV7 120 aa6.82□□□□□ -1.32
TPM3-210ENST00000368530 CDK2AP2O75956 126 aa6.82□□□□□ -1.32
TPM3-210ENST00000368530 NPSP0C0P6 89 aa6.82□□□□□ -1.32
TPM3-210ENST00000368530 ZNF22P17026 224 aaPredicted RBP6.82□□□□□ -1.32
TPM3-210ENST00000368530 HERVK_113P61574 105 aa6.82□□□□□ -1.32
TPM3-210ENST00000368530 MRPS36P82909 103 aaKnown RBP6.82□□□□□ -1.32
TPM3-210ENST00000368530 MRPL52Q86TS9 123 aaKnown RBP6.82□□□□□ -1.32
TPM3-210ENST00000368530 NFE4Q86UQ8 179 aa6.82□□□□□ -1.32
TPM3-210ENST00000368530 MAPKAPK5-AS1Q8N8E1 139 aa6.82□□□□□ -1.32
TPM3-210ENST00000368530 TMEM101Q96IK0 257 aa6.82□□□□□ -1.32
TPM3-210ENST00000368530 APOBP04114 4563 aaKnown RBP6.82□□□□□ -1.32
TPM3-210ENST00000368530 IGHV3-64A0A075B6Q5 118 aa6.81□□□□□ -1.32
TPM3-210ENST00000368530 E9PLD3 99 aa6.81□□□□□ -1.32
TPM3-210ENST00000368530 TRAV13-1A0A0B4J241 112 aa6.81□□□□□ -1.32
TPM3-210ENST00000368530 IGKV3OR2-268A0A0C4DH90 116 aa6.81□□□□□ -1.32
TPM3-210ENST00000368530 TMEM262E9PQX1 116 aa6.81□□□□□ -1.32
TPM3-210ENST00000368530 DLEU1O43261 78 aa6.81□□□□□ -1.32
TPM3-210ENST00000368530 UBE2D1P51668 147 aa6.81□□□□□ -1.32
TPM3-210ENST00000368530 SMAGPQ0VAQ4 97 aa6.81□□□□□ -1.32
TPM3-210ENST00000368530 MPV17L2Q567V2 206 aa6.81□□□□□ -1.32
TPM3-210ENST00000368530 CDC42SE2Q9NRR3 84 aa6.81□□□□□ -1.32
TPM3-210ENST00000368530 TMEM223A0PJW6 202 aa6.8□□□□□ -1.32
TPM3-210ENST00000368530 H7C423 109 aa6.8□□□□□ -1.32
TPM3-210ENST00000368530 LINC00469Q8N7U9 141 aa6.8□□□□□ -1.32
TPM3-210ENST00000368530 GEMIN7Q9H840 131 aaKnown RBP6.8□□□□□ -1.32
TPM3-210ENST00000368530 ICOSQ9Y6W8 199 aa6.8□□□□□ -1.32
TPM3-210ENST00000368530 IGLV4-60A0A075B6I1 120 aa6.79□□□□□ -1.32
TPM3-210ENST00000368530 TINCRA0A1B0GVN0 87 aa6.79□□□□□ -1.32
TPM3-210ENST00000368530 TSPEAR-AS2P59090 65 aa6.79□□□□□ -1.32
TPM3-210ENST00000368530 C15orf53Q8NAA6 179 aa6.79□□□□□ -1.32
TPM3-210ENST00000368530 CSDC2Q9Y534 153 aaKnown RBP6.79□□□□□ -1.32
TPM3-210ENST00000368530 DNAH5Q8TE73 4624 aa6.79□□□□□ -1.32
TPM3-210ENST00000368530 NBDYA0A0U1RRE5 68 aa6.78□□□□□ -1.32
TPM3-210ENST00000368530 MYMXA0A1B0GTQ4 84 aa6.78□□□□□ -1.32
TPM3-210ENST00000368530 ZNF815PA8K554 130 aa6.78□□□□□ -1.32
TPM3-210ENST00000368530 C16orf90A8MZG2 172 aa6.78□□□□□ -1.32
TPM3-210ENST00000368530 SPINK8P0C7L1 97 aa6.78□□□□□ -1.32
TPM3-210ENST00000368530 ZNF25P17030 456 aaPredicted RBP6.78□□□□□ -1.32
TPM3-210ENST00000368530 COX6A2Q02221 97 aa6.78□□□□□ -1.32
TPM3-210ENST00000368530 MRPL23Q16540 153 aaKnown RBP6.78□□□□□ -1.32
TPM3-210ENST00000368530 SVIPQ8NHG7 77 aa6.78□□□□□ -1.32
TPM3-210ENST00000368530 TRAV8-3A0A0A6YYJ7 113 aa6.77□□□□□ -1.33
TPM3-210ENST00000368530 J3QQQ9 107 aa6.77□□□□□ -1.33
TPM3-210ENST00000368530 LEPROTO15243 131 aa6.77□□□□□ -1.33
TPM3-210ENST00000368530 SIVA1O15304 175 aa6.77□□□□□ -1.33
TPM3-210ENST00000368530 LGALS3P17931 250 aaKnown RBP6.77□□□□□ -1.33
TPM3-210ENST00000368530 LINC00242Q5T6M2 205 aa6.77□□□□□ -1.33
TPM3-210ENST00000368530 Q8N1X5 172 aa6.77□□□□□ -1.33
TPM3-210ENST00000368530 C6orf223Q8N319 242 aa6.77□□□□□ -1.33
TPM3-210ENST00000368530 CDKN2A-AS1Q9UH64 79 aa6.77□□□□□ -1.33
TPM3-210ENST00000368530 RBX1P62877 108 aa6.76□□□□□ -1.33
TPM3-210ENST00000368530 HSD52Q0P140 79 aa6.76□□□□□ -1.33
TPM3-210ENST00000368530 BVES-AS1Q5T3Y7 98 aa6.76□□□□□ -1.33
TPM3-210ENST00000368530 PLEKHB2Q96CS7 222 aa6.76□□□□□ -1.33
TPM3-210ENST00000368530 LINC00588Q9Y4M8 146 aa6.76□□□□□ -1.33
TPM3-210ENST00000368530 HERC1Q15751 4861 aa6.76□□□□□ -1.33
TPM3-210ENST00000368530 A0A1B0GV90 55 aa6.76□□□□□ -1.33
TPM3-210ENST00000368530 IGHV3-30-3P0DP02 117 aa6.76□□□□□ -1.33
TPM3-210ENST00000368530 TIRAPP58753 221 aa6.76□□□□□ -1.33
TPM3-210ENST00000368530 HERVK_113P63121 156 aa6.76□□□□□ -1.33
TPM3-210ENST00000368530 LBHQ53QV2 105 aaPredicted RBP6.76□□□□□ -1.33
TPM3-210ENST00000368530 CLPSL2Q6UWE3 100 aa6.76□□□□□ -1.33
TPM3-210ENST00000368530 SCGB1D4Q6XE38 83 aa6.76□□□□□ -1.33
TPM3-210ENST00000368530 Q8N3U1 123 aa6.76□□□□□ -1.33
TPM3-210ENST00000368530 HIGD1BQ9P298 99 aa6.76□□□□□ -1.33
TPM3-210ENST00000368530 H3BRM9 83 aa6.75□□□□□ -1.33
TPM3-210ENST00000368530 COL5A1-AS1Q5SY13 56 aa6.75□□□□□ -1.33
TPM3-210ENST00000368530 SH2D6Q7Z4S9 175 aa6.75□□□□□ -1.33
TPM3-210ENST00000368530 KRTAP1-5Q9BYS1 174 aa6.75□□□□□ -1.33
TPM3-210ENST00000368530 IGLV5-45A0A087WSX0 123 aa6.74□□□□□ -1.33
TPM3-210ENST00000368530 IGHV1-58A0A0C4DH39 117 aa6.74□□□□□ -1.33
TPM3-210ENST00000368530 GCSHP23434 173 aa6.74□□□□□ -1.33
TPM3-210ENST00000368530 SEC11AP67812 179 aa6.74□□□□□ -1.33
TPM3-210ENST00000368530 LELP1Q5T871 98 aa6.74□□□□□ -1.33
TPM3-210ENST00000368530 KRTAP10-2P60368 255 aa6.73□□□□□ -1.33
TPM3-210ENST00000368530 LYPD5Q6UWN5 251 aa6.73□□□□□ -1.33
TPM3-210ENST00000368530 FAM19A3Q7Z5A8 133 aa6.73□□□□□ -1.33
TPM3-210ENST00000368530 ORAOV1Q8WV07 137 aa6.73□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 101.9 ms