RNA–Protein interactions for RNA: ENST00000368527.7

TPM3-209, Transcript of tropomyosin 3, humanhuman

TSL 4

Gene TPM3, Length 569 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-209ENST00000368527 FAM222AQ5U5X8 452 aa7.24□□□□□ -1.25
TPM3-209ENST00000368527 PRIMA1Q86XR5 153 aa7.24□□□□□ -1.25
TPM3-209ENST00000368527 LINC00308Q8TCZ7 52 aa7.24□□□□□ -1.25
TPM3-209ENST00000368527 ZNF625Q96I27 306 aaPredicted RBP7.24□□□□□ -1.25
TPM3-209ENST00000368527 CRYBG3Q68DQ2 2970 aa7.24□□□□□ -1.25
TPM3-209ENST00000368527 VPS13CQ709C8 3753 aa7.24□□□□□ -1.25
TPM3-209ENST00000368527 C9JAW5 83 aa7.23□□□□□ -1.25
TPM3-209ENST00000368527 F5H768 121 aa7.23□□□□□ -1.25
TPM3-209ENST00000368527 COX6A2Q02221 97 aa7.23□□□□□ -1.25
TPM3-209ENST00000368527 MEIG1Q5JSS6 88 aa7.23□□□□□ -1.25
TPM3-209ENST00000368527 ANKRD29Q8N6D5 301 aa7.23□□□□□ -1.25
TPM3-209ENST00000368527 TEP1Q99973 2627 aaKnown RBP7.23□□□□□ -1.25
TPM3-209ENST00000368527 A0A1B0GUV1 79 aa7.22□□□□□ -1.25
TPM3-209ENST00000368527 TRIAP1O43715 76 aa7.22□□□□□ -1.25
TPM3-209ENST00000368527 RPL13AP40429 203 aaKnown RBP7.22□□□□□ -1.25
TPM3-209ENST00000368527 CHCHD5Q9BSY4 110 aa7.22□□□□□ -1.25
TPM3-209ENST00000368527 PRO0255Q9UI72 69 aa7.22□□□□□ -1.25
TPM3-209ENST00000368527 FLNAP21333 2647 aaKnown RBP7.22□□□□□ -1.25
TPM3-209ENST00000368527 TRAV13-2A0A0B4J235 113 aa7.21□□□□□ -1.26
TPM3-209ENST00000368527 H7C2G1 150 aa7.21□□□□□ -1.26
TPM3-209ENST00000368527 EIF4EBP3O60516 100 aaPredicted RBP7.21□□□□□ -1.26
TPM3-209ENST00000368527 LY6G6DO95868 133 aa7.21□□□□□ -1.26
TPM3-209ENST00000368527 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP7.21□□□□□ -1.26
TPM3-209ENST00000368527 COX7B2Q8TF08 81 aa7.21□□□□□ -1.26
TPM3-209ENST00000368527 CARD19Q96LW7 228 aa7.21□□□□□ -1.26
TPM3-209ENST00000368527 A0A087WZ39 114 aa7.2□□□□□ -1.26
TPM3-209ENST00000368527 IBA57-AS1B1ANH7 110 aa7.2□□□□□ -1.26
TPM3-209ENST00000368527 LST1O00453 97 aa7.2□□□□□ -1.26
TPM3-209ENST00000368527 HIST2H2BDQ6DRA6 164 aa7.2□□□□□ -1.26
TPM3-209ENST00000368527 MTURNQ8N3F0 131 aa7.2□□□□□ -1.26
TPM3-209ENST00000368527 WFDC10AQ9H1F0 79 aa7.2□□□□□ -1.26
TPM3-209ENST00000368527 CSMD2Q7Z408 3487 aa7.2□□□□□ -1.26
TPM3-209ENST00000368527 CRLF1O75462 422 aa7.19□□□□□ -1.26
TPM3-209ENST00000368527 GAGE6Q13070 117 aa7.19□□□□□ -1.26
TPM3-209ENST00000368527 SS18Q15532 418 aa7.19□□□□□ -1.26
TPM3-209ENST00000368527 AKAP9Q99996 3911 aa7.18□□□□□ -1.26
TPM3-209ENST00000368527 ZFHX3Q15911 3703 aa7.18□□□□□ -1.26
TPM3-209ENST00000368527 TLN2Q9Y4G6 2542 aa7.18□□□□□ -1.26
TPM3-209ENST00000368527 IGHV3OR16-9A0A0B4J2B5 98 aa7.18□□□□□ -1.26
TPM3-209ENST00000368527 A8MZ25 164 aa7.18□□□□□ -1.26
TPM3-209ENST00000368527 COX7A2LO14548 114 aa7.18□□□□□ -1.26
TPM3-209ENST00000368527 C21orf62-AS1Q17RA5 79 aa7.18□□□□□ -1.26
TPM3-209ENST00000368527 C2orf82Q6UX34 121 aa7.18□□□□□ -1.26
TPM3-209ENST00000368527 UBE2WQ96B02 151 aa7.18□□□□□ -1.26
TPM3-209ENST00000368527 CCDC168Q8NDH2 2452 aa7.18□□□□□ -1.26
TPM3-209ENST00000368527 OTOGQ6ZRI0 2925 aa7.17□□□□□ -1.26
TPM3-209ENST00000368527 TRACP01848 142 aa7.17□□□□□ -1.26
TPM3-209ENST00000368527 MIFP14174 115 aa7.17□□□□□ -1.26
TPM3-209ENST00000368527 GYPEP15421 78 aa7.17□□□□□ -1.26
TPM3-209ENST00000368527 KRTAP10-3P60369 221 aa7.17□□□□□ -1.26
TPM3-209ENST00000368527 MRPL23Q16540 153 aaKnown RBP7.17□□□□□ -1.26
TPM3-209ENST00000368527 SHISA2Q6UWI4 295 aa7.17□□□□□ -1.26
TPM3-209ENST00000368527 X6R8D5 127 aa7.17□□□□□ -1.26
TPM3-209ENST00000368527 SONP18583 2426 aaKnown RBP7.16□□□□□ -1.26
TPM3-209ENST00000368527 MTORP42345 2549 aa7.16□□□□□ -1.26
TPM3-209ENST00000368527 LOC100131303A0A0U1RQF7 123 aa7.16□□□□□ -1.26
TPM3-209ENST00000368527 LINC00959A0A1B0GUT2 108 aa7.16□□□□□ -1.26
TPM3-209ENST00000368527 FAM240AA0A1B0GVK7 77 aa7.16□□□□□ -1.26
TPM3-209ENST00000368527 PAX4O43316 350 aa7.16□□□□□ -1.26
TPM3-209ENST00000368527 WIPF1O43516 503 aa7.16□□□□□ -1.26
TPM3-209ENST00000368527 CRPP02741 224 aa7.16□□□□□ -1.26
TPM3-209ENST00000368527 DEFB130BP0DP73 79 aa7.16□□□□□ -1.26
TPM3-209ENST00000368527 DEFB130AP0DP74 79 aa7.16□□□□□ -1.26
TPM3-209ENST00000368527 CXCL5P42830 114 aa7.16□□□□□ -1.26
TPM3-209ENST00000368527 MUC7Q8TAX7 377 aa7.16□□□□□ -1.26
TPM3-209ENST00000368527 PDZD2O15018 2839 aa7.15□□□□□ -1.26
TPM3-209ENST00000368527 DEFB121Q5J5C9 76 aa7.15□□□□□ -1.26
TPM3-209ENST00000368527 Q8IZM0 81 aa7.15□□□□□ -1.26
TPM3-209ENST00000368527 HIVEP2P31629 2446 aa7.15□□□□□ -1.27
TPM3-209ENST00000368527 H0YGX0 51 aa7.14□□□□□ -1.27
TPM3-209ENST00000368527 ATP5G1P05496 136 aa7.14□□□□□ -1.27
TPM3-209ENST00000368527 ACYP1P07311 99 aa7.14□□□□□ -1.27
TPM3-209ENST00000368527 RPL28P46779 137 aaKnown RBP7.14□□□□□ -1.27
TPM3-209ENST00000368527 NPC2P61916 151 aa7.14□□□□□ -1.27
TPM3-209ENST00000368527 WFDC9Q8NEX5 89 aa7.14□□□□□ -1.27
TPM3-209ENST00000368527 NTN5Q8WTR8 489 aaPredicted RBP7.14□□□□□ -1.27
TPM3-209ENST00000368527 CITED1Q99966 193 aa7.14□□□□□ -1.27
TPM3-209ENST00000368527 CDIP1Q9H305 208 aa7.14□□□□□ -1.27
TPM3-209ENST00000368527 IGLV4-60A0A075B6I1 120 aa7.13□□□□□ -1.27
TPM3-209ENST00000368527 TRAV8-4A0A0B4J246 113 aa7.13□□□□□ -1.27
TPM3-209ENST00000368527 A0A1B0GV72 72 aa7.13□□□□□ -1.27
TPM3-209ENST00000368527 DAD1P61803 113 aa7.13□□□□□ -1.27
TPM3-209ENST00000368527 COX17Q14061 63 aa7.13□□□□□ -1.27
TPM3-209ENST00000368527 C6orf226Q5I0X4 101 aa7.13□□□□□ -1.27
TPM3-209ENST00000368527 DAND5Q8N907 189 aa7.13□□□□□ -1.27
TPM3-209ENST00000368527 F8P00451 2351 aa7.12□□□□□ -1.27
TPM3-209ENST00000368527 SETD2Q9BYW2 2564 aaPredicted RBP7.12□□□□□ -1.27
TPM3-209ENST00000368527 SPART-AS1P0CW21 52 aa7.12□□□□□ -1.27
TPM3-209ENST00000368527 LINC00158P58513 81 aa7.12□□□□□ -1.27
TPM3-209ENST00000368527 SOSTDC1Q6X4U4 206 aa7.12□□□□□ -1.27
TPM3-209ENST00000368527 MIR7-3HGQ8N6C7 128 aa7.12□□□□□ -1.27
TPM3-209ENST00000368527 SND1-IT1Q9HBX3 110 aa7.12□□□□□ -1.27
TPM3-209ENST00000368527 TOMM7Q9P0U1 55 aa7.12□□□□□ -1.27
TPM3-209ENST00000368527 HIVEP1P15822 2718 aa7.12□□□□□ -1.27
TPM3-209ENST00000368527 INAFM1C9JVW0 142 aa7.11□□□□□ -1.27
TPM3-209ENST00000368527 CD164L2Q6UWJ8 174 aa7.11□□□□□ -1.27
TPM3-209ENST00000368527 SMR3AQ99954 134 aa7.11□□□□□ -1.27
TPM3-209ENST00000368527 WNK1Q9H4A3 2382 aa7.1□□□□□ -1.27
TPM3-209ENST00000368527 IGHV4-28A0A0C4DH34 117 aa7.1□□□□□ -1.27
TPM3-209ENST00000368527 INAFM2P0DMQ5 153 aa7.1□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms