RNA–Protein interactions for RNA: ENST00000368292.10

ECHDC1-204, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 854 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-204ENST00000368292 RNASE2P10153 161 aaKnown RBP3.43□□□□□ -1.86
ECHDC1-204ENST00000368292 RHOHQ15669 191 aa3.43□□□□□ -1.86
ECHDC1-204ENST00000368292 ZFAND2AQ8N6M9 145 aa3.43□□□□□ -1.86
ECHDC1-204ENST00000368292 LINC01006Q8NI28 216 aa3.43□□□□□ -1.86
ECHDC1-204ENST00000368292 ODF3Q96PU9 254 aa3.43□□□□□ -1.86
ECHDC1-204ENST00000368292 C11orf1Q9H5F2 150 aa3.43□□□□□ -1.86
ECHDC1-204ENST00000368292 IGHV3-21A0A0B4J1V1 117 aa3.42□□□□□ -1.86
ECHDC1-204ENST00000368292 IGHV7-4-1A0A0J9YVY3 117 aa3.42□□□□□ -1.86
ECHDC1-204ENST00000368292 NDUFAF8A1L188 74 aa3.42□□□□□ -1.86
ECHDC1-204ENST00000368292 CRYM-AS1A6NIL9 109 aa3.42□□□□□ -1.86
ECHDC1-204ENST00000368292 F2Z2F3 143 aa3.42□□□□□ -1.86
ECHDC1-204ENST00000368292 NDUFC1O43677 76 aa3.42□□□□□ -1.86
ECHDC1-204ENST00000368292 IGHV3-23P01764 117 aa3.42□□□□□ -1.86
ECHDC1-204ENST00000368292 HSPB1P04792 205 aaKnown RBP3.42□□□□□ -1.86
ECHDC1-204ENST00000368292 ACYP1P07311 99 aa3.42□□□□□ -1.86
ECHDC1-204ENST00000368292 UBE2G1P62253 170 aa3.42□□□□□ -1.86
ECHDC1-204ENST00000368292 Q1T7F1 81 aa3.42□□□□□ -1.86
ECHDC1-204ENST00000368292 DEFB134Q4QY38 66 aa3.42□□□□□ -1.86
ECHDC1-204ENST00000368292 LUZP6Q538Z0 58 aa3.42□□□□□ -1.86
ECHDC1-204ENST00000368292 RNASE13Q5GAN3 156 aaKnown RBP3.42□□□□□ -1.86
ECHDC1-204ENST00000368292 RPL7L1Q6DKI1 246 aaKnown RBP3.42□□□□□ -1.86
ECHDC1-204ENST00000368292 ZFP2Q6ZN57 461 aa3.42□□□□□ -1.86
ECHDC1-204ENST00000368292 CAMK2N1Q7Z7J9 78 aa3.42□□□□□ -1.86
ECHDC1-204ENST00000368292 PFN4Q8NHR9 129 aa3.42□□□□□ -1.86
ECHDC1-204ENST00000368292 ZNF414Q96IQ9 312 aa3.42□□□□□ -1.86
ECHDC1-204ENST00000368292 LINC01600Q96MT4 127 aa3.42□□□□□ -1.86
ECHDC1-204ENST00000368292 CST11Q9H112 138 aa3.42□□□□□ -1.86
ECHDC1-204ENST00000368292 MRPL35Q9NZE8 188 aaKnown RBP3.42□□□□□ -1.86
ECHDC1-204ENST00000368292 HIGD1BQ9P298 99 aa3.42□□□□□ -1.86
ECHDC1-204ENST00000368292 PCNX3Q9H6A9 2034 aa3.42□□□□□ -1.86
ECHDC1-204ENST00000368292 HSPG2P98160 4391 aa3.42□□□□□ -1.86
ECHDC1-204ENST00000368292 CGB3P0DN86 165 aa3.41□□□□□ -1.86
ECHDC1-204ENST00000368292 CGB7P0DN87 165 aa3.41□□□□□ -1.86
ECHDC1-204ENST00000368292 IGHV3-30-3P0DP02 117 aa3.41□□□□□ -1.86
ECHDC1-204ENST00000368292 C2orf83Q53S99 150 aa3.41□□□□□ -1.86
ECHDC1-204ENST00000368292 S100A7L2Q5SY68 101 aa3.41□□□□□ -1.86
ECHDC1-204ENST00000368292 SPANXN1Q5VSR9 72 aa3.41□□□□□ -1.86
ECHDC1-204ENST00000368292 TMEM256Q8N2U0 113 aa3.41□□□□□ -1.86
ECHDC1-204ENST00000368292 Q8N377 158 aa3.41□□□□□ -1.86
ECHDC1-204ENST00000368292 SCRT1Q9BWW7 348 aa3.41□□□□□ -1.86
ECHDC1-204ENST00000368292 PKHD1P08F94 4074 aa3.41□□□□□ -1.86
ECHDC1-204ENST00000368292 IGHV3-49A0A0A0MS15 119 aa3.4□□□□□ -1.87
ECHDC1-204ENST00000368292 IGHV3-66A0A0C4DH42 116 aa3.4□□□□□ -1.87
ECHDC1-204ENST00000368292 IGHV1-69P01742 117 aa3.4□□□□□ -1.87
ECHDC1-204ENST00000368292 IGKV3-11P04433 115 aa3.4□□□□□ -1.87
ECHDC1-204ENST00000368292 COX8AP10176 69 aa3.4□□□□□ -1.87
ECHDC1-204ENST00000368292 KRTAP10-12P60413 245 aa3.4□□□□□ -1.87
ECHDC1-204ENST00000368292 TMEM170BQ5T4T1 132 aa3.4□□□□□ -1.87
ECHDC1-204ENST00000368292 RETNLBQ9BQ08 111 aa3.4□□□□□ -1.87
ECHDC1-204ENST00000368292 DOCK11Q5JSL3 2073 aa3.4□□□□□ -1.87
ECHDC1-204ENST00000368292 DYNC1H1Q14204 4646 aaKnown RBP3.39□□□□□ -1.87
ECHDC1-204ENST00000368292 DSCAML1Q8TD84 2053 aa3.39□□□□□ -1.87
ECHDC1-204ENST00000368292 IGKV1D-17A0A075B6S4 117 aa3.39□□□□□ -1.87
ECHDC1-204ENST00000368292 C17orf51A8MQB3 221 aa3.39□□□□□ -1.87
ECHDC1-204ENST00000368292 SERF1AO75920 110 aa3.39□□□□□ -1.87
ECHDC1-204ENST00000368292 CLPSP04118 112 aa3.39□□□□□ -1.87
ECHDC1-204ENST00000368292 SMIM11AP58511 58 aa3.39□□□□□ -1.87
ECHDC1-204ENST00000368292 MIAQ16674 131 aa3.39□□□□□ -1.87
ECHDC1-204ENST00000368292 PSMG4Q5JS54 123 aa3.39□□□□□ -1.87
ECHDC1-204ENST00000368292 CYP2G1PQ6ZSU1 146 aa3.39□□□□□ -1.87
ECHDC1-204ENST00000368292 LINC00643Q86TS7 51 aa3.39□□□□□ -1.87
ECHDC1-204ENST00000368292 LINC00467Q9BRT7 94 aa3.39□□□□□ -1.87
ECHDC1-204ENST00000368292 SLC50A1Q9BRV3 221 aa3.39□□□□□ -1.87
ECHDC1-204ENST00000368292 CHCHD7Q9BUK0 85 aa3.39□□□□□ -1.87
ECHDC1-204ENST00000368292 GABARAPL1Q9H0R8 117 aa3.39□□□□□ -1.87
ECHDC1-204ENST00000368292 MANBALQ9NQG1 85 aa3.39□□□□□ -1.87
ECHDC1-204ENST00000368292 LINC00474Q9P2X8 69 aa3.39□□□□□ -1.87
ECHDC1-204ENST00000368292 KMT2AQ03164 3969 aa3.39□□□□□ -1.87
ECHDC1-204ENST00000368292 IGKV3D-15A0A087WSY6 115 aa3.38□□□□□ -1.87
ECHDC1-204ENST00000368292 A0A0G2JND7 137 aa3.38□□□□□ -1.87
ECHDC1-204ENST00000368292 A6NED7 52 aa3.38□□□□□ -1.87
ECHDC1-204ENST00000368292 SLC25A20O43772 301 aa3.38□□□□□ -1.87
ECHDC1-204ENST00000368292 NPYP01303 97 aa3.38□□□□□ -1.87
ECHDC1-204ENST00000368292 C3orf79P0CE67 100 aa3.38□□□□□ -1.87
ECHDC1-204ENST00000368292 SUPT4H1P63272 117 aaKnown RBP3.38□□□□□ -1.87
ECHDC1-204ENST00000368292 Q6P435 159 aa3.38□□□□□ -1.87
ECHDC1-204ENST00000368292 C2orf91Q6ZV80 131 aa3.38□□□□□ -1.87
ECHDC1-204ENST00000368292 DEFB107AQ8IZN7 70 aa3.38□□□□□ -1.87
ECHDC1-204ENST00000368292 LINC00269Q8N2A0 174 aa3.38□□□□□ -1.87
ECHDC1-204ENST00000368292 DEFB108BQ8NET1 73 aa3.38□□□□□ -1.87
ECHDC1-204ENST00000368292 TMEM141Q96I45 108 aa3.38□□□□□ -1.87
ECHDC1-204ENST00000368292 Q96M85 177 aa3.38□□□□□ -1.87
ECHDC1-204ENST00000368292 CYSTM1Q9H1C7 97 aa3.38□□□□□ -1.87
ECHDC1-204ENST00000368292 DMBT1Q9UGM3 2413 aaPredicted RBP3.38□□□□□ -1.87
ECHDC1-204ENST00000368292 TRAV13-2A0A0B4J235 113 aa3.37□□□□□ -1.87
ECHDC1-204ENST00000368292 LOC107984156A0A0G2JMH3 177 aa3.37□□□□□ -1.87
ECHDC1-204ENST00000368292 A0A0J9YWU9 116 aa3.37□□□□□ -1.87
ECHDC1-204ENST00000368292 TCRBV4S1A1TA0A5B7 111 aa3.37□□□□□ -1.87
ECHDC1-204ENST00000368292 BPY2O14599 106 aa3.37□□□□□ -1.87
ECHDC1-204ENST00000368292 GNRH2O43555 120 aa3.37□□□□□ -1.87
ECHDC1-204ENST00000368292 BCE1O60756 84 aa3.37□□□□□ -1.87
ECHDC1-204ENST00000368292 APCSP02743 223 aa3.37□□□□□ -1.87
ECHDC1-204ENST00000368292 ESRGQ1W209 222 aa3.37□□□□□ -1.87
ECHDC1-204ENST00000368292 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.37□□□□□ -1.87
ECHDC1-204ENST00000368292 ADM2Q7Z4H4 148 aa3.37□□□□□ -1.87
ECHDC1-204ENST00000368292 ARL17AQ8IVW1 177 aa3.37□□□□□ -1.87
ECHDC1-204ENST00000368292 DYNLRB2Q8TF09 96 aa3.37□□□□□ -1.87
ECHDC1-204ENST00000368292 SMIM7Q9BQ49 75 aa3.37□□□□□ -1.87
ECHDC1-204ENST00000368292 NDUFA12Q9UI09 145 aa3.37□□□□□ -1.87
ECHDC1-204ENST00000368292 TRAV3A0A0B4J244 114 aa3.36□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 115.5 ms