RNA–Protein interactions for RNA: ENST00000368021.7

USF1-203, Transcript of upstream transcription factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USF1, Length 1,807 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-203ENST00000368021 ANKRD29Q8N6D5 301 aa8.57□□□□□ -1.04
USF1-203ENST00000368021 KIR2DL4Q99706 377 aa8.57□□□□□ -1.04
USF1-203ENST00000368021 TRBV10-1A0A0K0K1A3 114 aa8.56□□□□□ -1.04
USF1-203ENST00000368021 P0DMU3 169 aa8.56□□□□□ -1.04
USF1-203ENST00000368021 FAM231AP0DMU4 169 aa8.56□□□□□ -1.04
USF1-203ENST00000368021 FAM231CP0DMU5 169 aa8.56□□□□□ -1.04
USF1-203ENST00000368021 PAPPA-AS1Q5QFB9 102 aa8.56□□□□□ -1.04
USF1-203ENST00000368021 C3orf22Q8N5N4 141 aa8.56□□□□□ -1.04
USF1-203ENST00000368021 LOC107984156A0A0G2JMH3 177 aa8.55□□□□□ -1.04
USF1-203ENST00000368021 SLC25A20O43772 301 aa8.55□□□□□ -1.04
USF1-203ENST00000368021 TMEM170BQ5T4T1 132 aa8.55□□□□□ -1.04
USF1-203ENST00000368021 ARL17AQ8IVW1 177 aa8.55□□□□□ -1.04
USF1-203ENST00000368021 NEXN-AS1Q8NBZ9 246 aa8.55□□□□□ -1.04
USF1-203ENST00000368021 LINC00526Q96FQ7 95 aa8.55□□□□□ -1.04
USF1-203ENST00000368021 DKK2Q9UBU2 259 aa8.55□□□□□ -1.04
USF1-203ENST00000368021 TENM3Q9P273 2699 aa8.54□□□□□ -1.04
USF1-203ENST00000368021 TRBV6-4A0A1B0GX49 114 aa8.54□□□□□ -1.04
USF1-203ENST00000368021 K7EQD1 137 aa8.54□□□□□ -1.04
USF1-203ENST00000368021 C9orf153Q5TBE3 101 aa8.54□□□□□ -1.04
USF1-203ENST00000368021 FAM222AQ5U5X8 452 aa8.54□□□□□ -1.04
USF1-203ENST00000368021 I3L3M4 83 aa8.54□□□□□ -1.04
USF1-203ENST00000368021 DEFB130BP0DP73 79 aa8.54□□□□□ -1.04
USF1-203ENST00000368021 DEFB130AP0DP74 79 aa8.54□□□□□ -1.04
USF1-203ENST00000368021 ATXN8Q156A1 80 aa8.53□□□□□ -1.04
USF1-203ENST00000368021 SLC25A29Q8N8R3 303 aa8.53□□□□□ -1.04
USF1-203ENST00000368021 C15orf53Q8NAA6 179 aa8.53□□□□□ -1.04
USF1-203ENST00000368021 STAB2Q8WWQ8 2551 aa8.52□□□□□ -1.04
USF1-203ENST00000368021 IGKV2D-26A0A0A0MRZ7 120 aa8.52□□□□□ -1.04
USF1-203ENST00000368021 TRGV4A0A0C4DH28 118 aa8.52□□□□□ -1.04
USF1-203ENST00000368021 H3BT86 120 aa8.52□□□□□ -1.04
USF1-203ENST00000368021 CXCL5P42830 114 aa8.52□□□□□ -1.04
USF1-203ENST00000368021 FHL2Q14192 279 aa8.52□□□□□ -1.04
USF1-203ENST00000368021 RHOHQ15669 191 aa8.52□□□□□ -1.04
USF1-203ENST00000368021 C10orf126Q8N4M7 172 aa8.52□□□□□ -1.04
USF1-203ENST00000368021 TOMM6Q96B49 74 aa8.52□□□□□ -1.04
USF1-203ENST00000368021 Q9UF83 564 aa8.52□□□□□ -1.04
USF1-203ENST00000368021 F8VRH5 84 aa8.52□□□□□ -1.05
USF1-203ENST00000368021 TSHBP01222 138 aa8.52□□□□□ -1.05
USF1-203ENST00000368021 SPART-AS1P0CW21 52 aa8.52□□□□□ -1.05
USF1-203ENST00000368021 TMEM258P61165 79 aa8.52□□□□□ -1.05
USF1-203ENST00000368021 RPL36AP83881 106 aaKnown RBP8.52□□□□□ -1.05
USF1-203ENST00000368021 RPL36ALQ969Q0 106 aaKnown RBP8.52□□□□□ -1.05
USF1-203ENST00000368021 DEFB4AO15263 64 aa8.51□□□□□ -1.05
USF1-203ENST00000368021 HERVK_113P61574 105 aa8.51□□□□□ -1.05
USF1-203ENST00000368021 C2orf66Q6UXQ4 117 aa8.51□□□□□ -1.05
USF1-203ENST00000368021 FAM19A5Q7Z5A7 132 aaPredicted RBP8.51□□□□□ -1.05
USF1-203ENST00000368021 C11orf68Q9H3H3 251 aaKnown RBP8.51□□□□□ -1.05
USF1-203ENST00000368021 RETNQ9HD89 108 aa8.51□□□□□ -1.05
USF1-203ENST00000368021 CRYGAP11844 174 aa8.5□□□□□ -1.05
USF1-203ENST00000368021 DAD1P61803 113 aa8.5□□□□□ -1.05
USF1-203ENST00000368021 BAALCQ8WXS3 180 aa8.5□□□□□ -1.05
USF1-203ENST00000368021 UBE2WQ96B02 151 aa8.5□□□□□ -1.05
USF1-203ENST00000368021 SRSF9Q13242 221 aaKnown RBP eCLIP8.5□□□□□ -1.05
USF1-203ENST00000368021 DAZ4Q86SG3 579 aaKnown RBP8.5□□□□□ -1.05
USF1-203ENST00000368021 DAZ3Q9NR90 486 aaKnown RBP8.5□□□□□ -1.05
USF1-203ENST00000368021 CELA1Q9UNI1 258 aa8.5□□□□□ -1.05
USF1-203ENST00000368021 TRAV16A0A0A6YYK6 109 aaPredicted RBP8.49□□□□□ -1.05
USF1-203ENST00000368021 TCL1BO95988 128 aa8.49□□□□□ -1.05
USF1-203ENST00000368021 LINC00694P0DN24 101 aa8.49□□□□□ -1.05
USF1-203ENST00000368021 TM2D3Q9BRN9 247 aa8.49□□□□□ -1.05
USF1-203ENST00000368021 PRO1854Q9UHT4 67 aa8.49□□□□□ -1.05
USF1-203ENST00000368021 TRBV10-2A0A0K0K1G8 114 aa8.48□□□□□ -1.05
USF1-203ENST00000368021 F5H768 121 aa8.48□□□□□ -1.05
USF1-203ENST00000368021 PRO0255Q9UI72 69 aa8.48□□□□□ -1.05
USF1-203ENST00000368021 C20orf203Q8NBC4 194 aa8.47□□□□□ -1.05
USF1-203ENST00000368021 SCGB3A1Q96QR1 104 aa8.47□□□□□ -1.05
USF1-203ENST00000368021 A0A0B4J2C4 111 aa8.47□□□□□ -1.05
USF1-203ENST00000368021 HERVK_113P63121 156 aa8.47□□□□□ -1.05
USF1-203ENST00000368021 SCGB1D4Q6XE38 83 aa8.47□□□□□ -1.05
USF1-203ENST00000368021 TIMM17AQ99595 171 aa8.47□□□□□ -1.05
USF1-203ENST00000368021 IGIPA6NJ69 53 aa8.46□□□□□ -1.06
USF1-203ENST00000368021 ATOX1O00244 68 aa8.46□□□□□ -1.06
USF1-203ENST00000368021 GAGE2AQ6NT46 116 aa8.46□□□□□ -1.06
USF1-203ENST00000368021 DEFB104AQ8WTQ1 72 aa8.46□□□□□ -1.06
USF1-203ENST00000368021 IGHV3-38A0A0C4DH36 116 aa8.45□□□□□ -1.06
USF1-203ENST00000368021 COX7CP15954 63 aa8.45□□□□□ -1.06
USF1-203ENST00000368021 RPL39P62891 51 aaKnown RBP8.45□□□□□ -1.06
USF1-203ENST00000368021 TMEM141Q96I45 108 aa8.45□□□□□ -1.06
USF1-203ENST00000368021 LOC100131303A0A0U1RQF7 123 aa8.45□□□□□ -1.06
USF1-203ENST00000368021 COX6CP09669 75 aa8.45□□□□□ -1.06
USF1-203ENST00000368021 LINC00643Q86TS7 51 aa8.45□□□□□ -1.06
USF1-203ENST00000368021 MAPKAPK5-AS1Q8N8E1 139 aa8.45□□□□□ -1.06
USF1-203ENST00000368021 CHCHD7Q9BUK0 85 aa8.45□□□□□ -1.06
USF1-203ENST00000368021 MRPL35Q9NZE8 188 aaKnown RBP8.45□□□□□ -1.06
USF1-203ENST00000368021 PYGO1Q9Y3Y4 419 aa8.44□□□□□ -1.06
USF1-203ENST00000368021 ZNF815PA8K554 130 aa8.43□□□□□ -1.06
USF1-203ENST00000368021 NDUFC2-KCTD14E9PQ53 114 aa8.43□□□□□ -1.06
USF1-203ENST00000368021 PAX4O43316 350 aa8.43□□□□□ -1.06
USF1-203ENST00000368021 TRACP01848 142 aa8.43□□□□□ -1.06
USF1-203ENST00000368021 GYPEP15421 78 aa8.43□□□□□ -1.06
USF1-203ENST00000368021 LINC01620Q4KN68 170 aa8.43□□□□□ -1.06
USF1-203ENST00000368021 NTN5Q8WTR8 489 aaPredicted RBP8.43□□□□□ -1.06
USF1-203ENST00000368021 A0A0J9YWU9 116 aa8.43□□□□□ -1.06
USF1-203ENST00000368021 TRBV30A0A0K0K1B3 111 aa8.43□□□□□ -1.06
USF1-203ENST00000368021 VSIG2Q96IQ7 327 aa8.43□□□□□ -1.06
USF1-203ENST00000368021 DNAH7Q8WXX0 4024 aa8.42□□□□□ -1.06
USF1-203ENST00000368021 NTM-AS1Q6ZSK4 140 aa8.42□□□□□ -1.06
USF1-203ENST00000368021 WWC2-AS2Q96NR7 200 aa8.42□□□□□ -1.06
USF1-203ENST00000368021 PRO0628Q9UI54 55 aa8.42□□□□□ -1.06
USF1-203ENST00000368021 CFC1BP0CG36 223 aa8.41□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 56.3 ms