RNA–Protein interactions for RNA: ENST00000367740.2

VAMP4-202, Transcript of vesicle associated membrane protein 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VAMP4, Length 1,193 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP4-202ENST00000367740 C9orf62Q8N4C0 152 aa8.3□□□□□ -1.08
VAMP4-202ENST00000367740 XKRY2A2RUG3 117 aa8.29□□□□□ -1.08
VAMP4-202ENST00000367740 PFDN1O60925 122 aa8.29□□□□□ -1.08
VAMP4-202ENST00000367740 FOXA3P55318 350 aaPredicted RBP8.29□□□□□ -1.08
VAMP4-202ENST00000367740 FAM229BQ4G0N7 80 aa8.29□□□□□ -1.08
VAMP4-202ENST00000367740 MARVELD1Q9BSK0 173 aa8.29□□□□□ -1.08
VAMP4-202ENST00000367740 BORCS7-ASMTA0A0B4J1R7 106 aa8.28□□□□□ -1.08
VAMP4-202ENST00000367740 BCE1O60756 84 aa8.28□□□□□ -1.08
VAMP4-202ENST00000367740 CENPWQ5EE01 88 aa8.28□□□□□ -1.08
VAMP4-202ENST00000367740 TEX261Q6UWH6 196 aa8.28□□□□□ -1.08
VAMP4-202ENST00000367740 FP248Q71RG6 208 aaPredicted RBP8.28□□□□□ -1.08
VAMP4-202ENST00000367740 CSDC2Q9Y534 153 aaKnown RBP8.28□□□□□ -1.08
VAMP4-202ENST00000367740 NDUFC2-KCTD14E9PQ53 114 aa8.27□□□□□ -1.09
VAMP4-202ENST00000367740 Q6ZUT4 128 aa8.27□□□□□ -1.09
VAMP4-202ENST00000367740 UBE2D4Q9Y2X8 147 aa8.27□□□□□ -1.09
VAMP4-202ENST00000367740 C22orf24Q9Y442 160 aa8.27□□□□□ -1.09
VAMP4-202ENST00000367740 IGHV3OR16-9A0A0B4J2B5 98 aa8.25□□□□□ -1.09
VAMP4-202ENST00000367740 A0A1B0GV50 99 aa8.25□□□□□ -1.09
VAMP4-202ENST00000367740 ST20Q9HBF5 79 aa8.25□□□□□ -1.09
VAMP4-202ENST00000367740 IGKV2D-26A0A0A0MRZ7 120 aa8.24□□□□□ -1.09
VAMP4-202ENST00000367740 TRBV27A0A0K0K1C4 114 aa8.24□□□□□ -1.09
VAMP4-202ENST00000367740 POLR2KP53803 58 aaKnown RBP8.24□□□□□ -1.09
VAMP4-202ENST00000367740 KIAA0087Q14695 138 aa8.24□□□□□ -1.09
VAMP4-202ENST00000367740 Q5BKY6 102 aa8.24□□□□□ -1.09
VAMP4-202ENST00000367740 CYTL1Q9NRR1 136 aa8.24□□□□□ -1.09
VAMP4-202ENST00000367740 SSPOA2VEC9 5147 aa8.23□□□□□ -1.09
VAMP4-202ENST00000367740 TRBV30A0A0K0K1B3 111 aa8.23□□□□□ -1.09
VAMP4-202ENST00000367740 LBHQ53QV2 105 aaPredicted RBP8.23□□□□□ -1.09
VAMP4-202ENST00000367740 KRTAP13-1Q8IUC0 172 aa8.23□□□□□ -1.09
VAMP4-202ENST00000367740 C11orf52Q96A22 123 aa8.23□□□□□ -1.09
VAMP4-202ENST00000367740 C21orf62-AS1Q17RA5 79 aa8.22□□□□□ -1.09
VAMP4-202ENST00000367740 C2orf82Q6UX34 121 aa8.22□□□□□ -1.09
VAMP4-202ENST00000367740 SMIM15Q7Z3B0 74 aa8.22□□□□□ -1.09
VAMP4-202ENST00000367740 SFT2D1Q8WV19 159 aa8.22□□□□□ -1.09
VAMP4-202ENST00000367740 KRTAP9-8Q9BYQ0 159 aa8.22□□□□□ -1.09
VAMP4-202ENST00000367740 IFITM3Q01628 133 aa8.21□□□□□ -1.1
VAMP4-202ENST00000367740 KCNRGQ8N5I3 272 aa8.21□□□□□ -1.1
VAMP4-202ENST00000367740 SMIM12Q96EX1 92 aa8.21□□□□□ -1.1
VAMP4-202ENST00000367740 RAB19A4D1S5 217 aa8.2□□□□□ -1.1
VAMP4-202ENST00000367740 UPK1BO75841 260 aa8.2□□□□□ -1.1
VAMP4-202ENST00000367740 MBD3L1Q8WWY6 194 aa8.2□□□□□ -1.1
VAMP4-202ENST00000367740 PACRGQ96M98 296 aaPredicted RBP8.2□□□□□ -1.1
VAMP4-202ENST00000367740 USH2AO75445 5202 aa8.2□□□□□ -1.1
VAMP4-202ENST00000367740 TRBV20OR9-2A0A075B6H5 130 aa8.19□□□□□ -1.1
VAMP4-202ENST00000367740 GNG4P50150 75 aa8.19□□□□□ -1.1
VAMP4-202ENST00000367740 SMAGPQ0VAQ4 97 aa8.19□□□□□ -1.1
VAMP4-202ENST00000367740 MRPL55Q7Z7F7 128 aaKnown RBP8.19□□□□□ -1.1
VAMP4-202ENST00000367740 LINC00469Q8N7U9 141 aa8.19□□□□□ -1.1
VAMP4-202ENST00000367740 NUDT10Q8NFP7 164 aa8.19□□□□□ -1.1
VAMP4-202ENST00000367740 NUDT11Q96G61 164 aa8.19□□□□□ -1.1
VAMP4-202ENST00000367740 TP73-AS1Q9UF72 201 aa8.19□□□□□ -1.1
VAMP4-202ENST00000367740 FLGP20930 4061 aaPredicted RBP8.19□□□□□ -1.1
VAMP4-202ENST00000367740 FCER1GP30273 86 aa8.18□□□□□ -1.1
VAMP4-202ENST00000367740 C3orf22Q8N5N4 141 aa8.18□□□□□ -1.1
VAMP4-202ENST00000367740 FAM213BQ8TBF2 198 aa8.18□□□□□ -1.1
VAMP4-202ENST00000367740 FAM104AQ969W3 186 aa8.18□□□□□ -1.1
VAMP4-202ENST00000367740 CCL20P78556 96 aa8.17□□□□□ -1.1
VAMP4-202ENST00000367740 TIMM21Q9BVV7 248 aa8.17□□□□□ -1.1
VAMP4-202ENST00000367740 XAGE1AQ9HD64 81 aa8.17□□□□□ -1.1
VAMP4-202ENST00000367740 FXYD6-FXYD2A0A087WZ82 144 aa8.16□□□□□ -1.1
VAMP4-202ENST00000367740 ZNF727A8MUV8 499 aa8.16□□□□□ -1.1
VAMP4-202ENST00000367740 RPL37AP8A6NKH3 93 aa8.15□□□□□ -1.1
VAMP4-202ENST00000367740 UBE2AP49459 152 aa8.15□□□□□ -1.1
VAMP4-202ENST00000367740 SPAG11AQ6PDA7 123 aa8.15□□□□□ -1.1
VAMP4-202ENST00000367740 FCGBPQ9Y6R7 5405 aaPredicted RBP8.15□□□□□ -1.11
VAMP4-202ENST00000367740 TNFRSF6BO95407 300 aa8.14□□□□□ -1.11
VAMP4-202ENST00000367740 LINC00167Q96N53 147 aa8.14□□□□□ -1.11
VAMP4-202ENST00000367740 BIN3Q9NQY0 253 aa8.14□□□□□ -1.11
VAMP4-202ENST00000367740 SYNE2Q8WXH0 6885 aaKnown RBP8.13□□□□□ -1.11
VAMP4-202ENST00000367740 VCYO14598 125 aa8.13□□□□□ -1.11
VAMP4-202ENST00000367740 TGIF2-C20orf24A0A0A6YYL0 155 aa8.12□□□□□ -1.11
VAMP4-202ENST00000367740 IFITM10A6NMD0 228 aa8.12□□□□□ -1.11
VAMP4-202ENST00000367740 S100ZQ8WXG8 99 aa8.12□□□□□ -1.11
VAMP4-202ENST00000367740 MANBALQ9NQG1 85 aa8.12□□□□□ -1.11
VAMP4-202ENST00000367740 M0R2T5 61 aa8.11□□□□□ -1.11
VAMP4-202ENST00000367740 RPL39P62891 51 aaKnown RBP8.11□□□□□ -1.11
VAMP4-202ENST00000367740 GNG13Q9P2W3 67 aa8.11□□□□□ -1.11
VAMP4-202ENST00000367740 A0A1B0GVG6 124 aa8.1□□□□□ -1.11
VAMP4-202ENST00000367740 GAGE10A6NGK3 116 aa8.1□□□□□ -1.11
VAMP4-202ENST00000367740 SMKR1H3BMG3 65 aa8.1□□□□□ -1.11
VAMP4-202ENST00000367740 GIPP09681 153 aaPredicted RBP8.1□□□□□ -1.11
VAMP4-202ENST00000367740 RAB4AP20338 218 aa8.1□□□□□ -1.11
VAMP4-202ENST00000367740 LINC00299Q6ZSB3 139 aa8.1□□□□□ -1.11
VAMP4-202ENST00000367740 TMEM18Q96B42 140 aa8.1□□□□□ -1.11
VAMP4-202ENST00000367740 KIR2DL4Q99706 377 aa8.1□□□□□ -1.11
VAMP4-202ENST00000367740 UMAD1C9J7I0 102 aa8.09□□□□□ -1.11
VAMP4-202ENST00000367740 K7EN84 100 aa8.09□□□□□ -1.11
VAMP4-202ENST00000367740 SUMO2P61956 95 aaKnown RBP8.09□□□□□ -1.11
VAMP4-202ENST00000367740 HBBP68871 147 aa8.09□□□□□ -1.11
VAMP4-202ENST00000367740 PNRC1Q12796 327 aaPredicted RBP8.09□□□□□ -1.11
VAMP4-202ENST00000367740 DAND5Q8N907 189 aa8.09□□□□□ -1.11
VAMP4-202ENST00000367740 NRACQ8N912 160 aa8.09□□□□□ -1.11
VAMP4-202ENST00000367740 PRLHP81277 87 aa8.08□□□□□ -1.12
VAMP4-202ENST00000367740 MRPS36P82909 103 aaKnown RBP8.08□□□□□ -1.12
VAMP4-202ENST00000367740 AMN1Q8IY45 258 aa8.08□□□□□ -1.12
VAMP4-202ENST00000367740 TMEM191AQ9H0A3 160 aa8.08□□□□□ -1.12
VAMP4-202ENST00000367740 MACF1Q9UPN3 7388 aaKnown RBP8.08□□□□□ -1.12
VAMP4-202ENST00000367740 SPANXA1Q9NS26 97 aa8.07□□□□□ -1.12
VAMP4-202ENST00000367740 ATP6V1G1O75348 118 aa8.06□□□□□ -1.12
VAMP4-202ENST00000367740 RPL32P62910 135 aaKnown RBP8.06□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 61.9 ms