RNA–Protein interactions for RNA: ENST00000364700.1

RNU4-56P-201, Transcript of RNA, U4 small nuclear 56, pseudogene, humanhuman

BASIC

Gene RNU4-56P, Length 142 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-56P-201ENST00000364700 PPP3R2Q96LZ3 170 aa-0.4□□□□□ -2.47
RNU4-56P-201ENST00000364700 FAM107BQ9H098 131 aa-0.4□□□□□ -2.47
RNU4-56P-201ENST00000364700 DYNLRB1Q9NP97 96 aa-0.4□□□□□ -2.47
RNU4-56P-201ENST00000364700 HMGXB3Q12766 1538 aa-0.4□□□□□ -2.47
RNU4-56P-201ENST00000364700 NF1P21359 2839 aa-0.4□□□□□ -2.47
RNU4-56P-201ENST00000364700 NBEAL1Q6ZS30 2694 aa-0.41□□□□□ -2.47
RNU4-56P-201ENST00000364700 UBR4Q5T4S7 5183 aa-0.41□□□□□ -2.47
RNU4-56P-201ENST00000364700 DOPEY1Q5JWR5 2465 aa-0.41□□□□□ -2.47
RNU4-56P-201ENST00000364700 TULP4Q9NRJ4 1543 aa-0.41□□□□□ -2.48
RNU4-56P-201ENST00000364700 PIGBOS1A0A0B4J2F0 54 aa-0.41□□□□□ -2.48
RNU4-56P-201ENST00000364700 FAM25AB3EWG3 89 aa-0.41□□□□□ -2.48
RNU4-56P-201ENST00000364700 FAM25CB3EWG5 89 aa-0.41□□□□□ -2.48
RNU4-56P-201ENST00000364700 FAM25GB3EWG6 89 aa-0.41□□□□□ -2.48
RNU4-56P-201ENST00000364700 Q6JHZ5 121 aa-0.41□□□□□ -2.48
RNU4-56P-201ENST00000364700 CDC42SE2Q9NRR3 84 aa-0.41□□□□□ -2.48
RNU4-56P-201ENST00000364700 SMG6Q86US8 1419 aaKnown RBP-0.41□□□□□ -2.48
RNU4-56P-201ENST00000364700 ROCK2O75116 1388 aaKnown RBP-0.42□□□□□ -2.48
RNU4-56P-201ENST00000364700 SCN7AQ01118 1682 aa-0.42□□□□□ -2.48
RNU4-56P-201ENST00000364700 SSSCA1O60232 199 aa-0.42□□□□□ -2.48
RNU4-56P-201ENST00000364700 TNFP01375 233 aa-0.42□□□□□ -2.48
RNU4-56P-201ENST00000364700 APOC2P02655 101 aa-0.42□□□□□ -2.48
RNU4-56P-201ENST00000364700 COX17Q14061 63 aa-0.42□□□□□ -2.48
RNU4-56P-201ENST00000364700 TMEM170BQ5T4T1 132 aa-0.42□□□□□ -2.48
RNU4-56P-201ENST00000364700 C8orf59Q8N0T1 100 aaPredicted RBP-0.42□□□□□ -2.48
RNU4-56P-201ENST00000364700 DEFB123Q8N688 67 aa-0.42□□□□□ -2.48
RNU4-56P-201ENST00000364700 MYOZ3Q8TDC0 251 aa-0.42□□□□□ -2.48
RNU4-56P-201ENST00000364700 COL4A6Q14031 1691 aa-0.43□□□□□ -2.48
RNU4-56P-201ENST00000364700 HYDINQ4G0P3 5121 aa-0.43□□□□□ -2.48
RNU4-56P-201ENST00000364700 NAIPQ13075 1403 aa-0.43□□□□□ -2.48
RNU4-56P-201ENST00000364700 TSC22D3Q99576 134 aa-0.43□□□□□ -2.48
RNU4-56P-201ENST00000364700 DPH3P1Q9H4G8 78 aa-0.43□□□□□ -2.48
RNU4-56P-201ENST00000364700 CREBBPQ92793 2442 aa-0.44□□□□□ -2.48
RNU4-56P-201ENST00000364700 TGP01266 2768 aa-0.44□□□□□ -2.48
RNU4-56P-201ENST00000364700 REV3LO60673 3130 aa-0.44□□□□□ -2.48
RNU4-56P-201ENST00000364700 TRBV6-1A0A0K0K1D8 114 aa-0.44□□□□□ -2.48
RNU4-56P-201ENST00000364700 TPPP2P59282 170 aa-0.44□□□□□ -2.48
RNU4-56P-201ENST00000364700 MYOM2P54296 1465 aa-0.44□□□□□ -2.48
RNU4-56P-201ENST00000364700 RNF213Q63HN8 5207 aa-0.45□□□□□ -2.48
RNU4-56P-201ENST00000364700 DLEU1O43261 78 aa-0.45□□□□□ -2.48
RNU4-56P-201ENST00000364700 SFT2D2O95562 160 aa-0.45□□□□□ -2.48
RNU4-56P-201ENST00000364700 AKAIN1P0CW23 69 aa-0.45□□□□□ -2.48
RNU4-56P-201ENST00000364700 MRPL54Q6P161 138 aaKnown RBP-0.45□□□□□ -2.48
RNU4-56P-201ENST00000364700 EPPK1P58107 5090 aaKnown RBP-0.45□□□□□ -2.48
RNU4-56P-201ENST00000364700 PKHD1P08F94 4074 aa-0.45□□□□□ -2.48
RNU4-56P-201ENST00000364700 FLGP20930 4061 aaPredicted RBP-0.45□□□□□ -2.48
RNU4-56P-201ENST00000364700 MRC2Q9UBG0 1479 aa-0.46□□□□□ -2.48
RNU4-56P-201ENST00000364700 SHANK2Q9UPX8 1470 aa-0.46□□□□□ -2.48
RNU4-56P-201ENST00000364700 CHD1O14646 1710 aa-0.46□□□□□ -2.48
RNU4-56P-201ENST00000364700 A0A1B0GV90 55 aa-0.46□□□□□ -2.48
RNU4-56P-201ENST00000364700 SPRR1BP22528 89 aa-0.46□□□□□ -2.48
RNU4-56P-201ENST00000364700 LAMA5O15230 3695 aa-0.46□□□□□ -2.48
RNU4-56P-201ENST00000364700 DIP2CQ9Y2E4 1556 aa-0.46□□□□□ -2.48
RNU4-56P-201ENST00000364700 SVEP1Q4LDE5 3571 aa-0.46□□□□□ -2.48
RNU4-56P-201ENST00000364700 SPHKAPQ2M3C7 1700 aa-0.47□□□□□ -2.48
RNU4-56P-201ENST00000364700 NUP188Q5SRE5 1749 aa-0.47□□□□□ -2.48
RNU4-56P-201ENST00000364700 STARD9Q9P2P6 4700 aa-0.47□□□□□ -2.48
RNU4-56P-201ENST00000364700 HIVEP1P15822 2718 aa-0.47□□□□□ -2.48
RNU4-56P-201ENST00000364700 EHBP1L1Q8N3D4 1523 aa-0.47□□□□□ -2.48
RNU4-56P-201ENST00000364700 ARHGEF12Q9NZN5 1544 aa-0.47□□□□□ -2.48
RNU4-56P-201ENST00000364700 LOC285095A0A1B0GVY8 99 aa-0.47□□□□□ -2.48
RNU4-56P-201ENST00000364700 EFCAB10A6NFE3 127 aa-0.47□□□□□ -2.48
RNU4-56P-201ENST00000364700 IFNGP01579 166 aa-0.47□□□□□ -2.48
RNU4-56P-201ENST00000364700 SPRR2BP35325 72 aa-0.47□□□□□ -2.48
RNU4-56P-201ENST00000364700 DCDP81605 110 aaKnown RBP-0.47□□□□□ -2.48
RNU4-56P-201ENST00000364700 RPL13AP3Q6NVV1 102 aa-0.47□□□□□ -2.48
RNU4-56P-201ENST00000364700 TMEM263Q8WUH6 116 aaKnown RBP-0.47□□□□□ -2.48
RNU4-56P-201ENST00000364700 FAM167A-AS1Q96KT0 104 aa-0.47□□□□□ -2.48
RNU4-56P-201ENST00000364700 IER3IP1Q9Y5U9 82 aa-0.47□□□□□ -2.48
RNU4-56P-201ENST00000364700 CNOT1A5YKK6 2376 aaKnown RBP-0.47□□□□□ -2.49
RNU4-56P-201ENST00000364700 MAGI1Q96QZ7 1491 aaPredicted RBP-0.48□□□□□ -2.49
RNU4-56P-201ENST00000364700 RYR2Q92736 4967 aa-0.48□□□□□ -2.49
RNU4-56P-201ENST00000364700 UBE2L5PA0A1B0GUS4 154 aa-0.48□□□□□ -2.49
RNU4-56P-201ENST00000364700 CHKB-CPT1BH3BT56 60 aa-0.48□□□□□ -2.49
RNU4-56P-201ENST00000364700 APOC3P02656 99 aa-0.48□□□□□ -2.49
RNU4-56P-201ENST00000364700 IGLC1P0CG04 106 aa-0.48□□□□□ -2.49
RNU4-56P-201ENST00000364700 UBE2D3P61077 147 aa-0.48□□□□□ -2.49
RNU4-56P-201ENST00000364700 UBE2D2P62837 147 aa-0.48□□□□□ -2.49
RNU4-56P-201ENST00000364700 UBE2L3P68036 154 aaKnown RBP-0.48□□□□□ -2.49
RNU4-56P-201ENST00000364700 C9orf153Q5TBE3 101 aa-0.48□□□□□ -2.49
RNU4-56P-201ENST00000364700 C10orf113Q5VZT2 155 aa-0.48□□□□□ -2.49
RNU4-56P-201ENST00000364700 KTN1Q86UP2 1357 aaKnown RBP-0.48□□□□□ -2.49
RNU4-56P-201ENST00000364700 ADGRL2O95490 1459 aa-0.48□□□□□ -2.49
RNU4-56P-201ENST00000364700 GAPVD1Q14C86 1478 aa-0.48□□□□□ -2.49
RNU4-56P-201ENST00000364700 SETD2Q9BYW2 2564 aaPredicted RBP-0.49□□□□□ -2.49
RNU4-56P-201ENST00000364700 SONP18583 2426 aaKnown RBP-0.49□□□□□ -2.49
RNU4-56P-201ENST00000364700 LINC00959A0A1B0GUT2 108 aa-0.49□□□□□ -2.49
RNU4-56P-201ENST00000364700 COX6B1P14854 86 aa-0.49□□□□□ -2.49
RNU4-56P-201ENST00000364700 S100A3P33764 101 aa-0.49□□□□□ -2.49
RNU4-56P-201ENST00000364700 PIGYQ3MUY2 71 aa-0.49□□□□□ -2.49
RNU4-56P-201ENST00000364700 FAM223AQ8IWN6 122 aa-0.49□□□□□ -2.49
RNU4-56P-201ENST00000364700 NXT2Q9NPJ8 142 aaKnown RBP-0.49□□□□□ -2.49
RNU4-56P-201ENST00000364700 SCAPERQ9BY12 1400 aa-0.49□□□□□ -2.49
RNU4-56P-201ENST00000364700 WDR7Q9Y4E6 1490 aa-0.49□□□□□ -2.49
RNU4-56P-201ENST00000364700 KIAA0556O60303 1618 aa-0.49□□□□□ -2.49
RNU4-56P-201ENST00000364700 PDCD11Q14690 1871 aaKnown RBP-0.5□□□□□ -2.49
RNU4-56P-201ENST00000364700 ANKRD36A6QL64 1941 aa-0.5□□□□□ -2.49
RNU4-56P-201ENST00000364700 K7EQZ3 153 aa-0.5□□□□□ -2.49
RNU4-56P-201ENST00000364700 CORTO00230 105 aa-0.5□□□□□ -2.49
RNU4-56P-201ENST00000364700 NRKQ7Z2Y5 1582 aa-0.5□□□□□ -2.49
RNU4-56P-201ENST00000364700 CC2D2AQ9P2K1 1620 aa-0.5□□□□□ -2.49
Retrieved 100 of 20,778 RNA–protein pairs in 68.7 ms