RNA–Protein interactions for RNA: ENST00000360004.5

HLA-DRB1-201, Transcript of major histocompatibility complex, class II, DR beta 1, humanhuman

APPRIS P1 BASIC

Gene HLA-DRB1, Length 1,229 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRB1-201ENST00000360004 ATP5LO75964 103 aa12.51□□□□□ -0.41
HLA-DRB1-201ENST00000360004 LINC00242Q5T6M2 205 aa12.51□□□□□ -0.41
HLA-DRB1-201ENST00000360004 LINC00173Q6ZV60 143 aa12.51□□□□□ -0.41
HLA-DRB1-201ENST00000360004 BIRC6Q9NR09 4857 aa12.5□□□□□ -0.41
HLA-DRB1-201ENST00000360004 GVQW2A0A096LPI5 108 aaPredicted RBP12.5□□□□□ -0.41
HLA-DRB1-201ENST00000360004 PMVKQ15126 192 aa12.5□□□□□ -0.41
HLA-DRB1-201ENST00000360004 A0A096LNJ9 63 aa12.49□□□□□ -0.41
HLA-DRB1-201ENST00000360004 KRTAP10-1P60331 282 aa12.49□□□□□ -0.41
HLA-DRB1-201ENST00000360004 HERVK_113P63121 156 aa12.49□□□□□ -0.41
HLA-DRB1-201ENST00000360004 LINC01620Q4KN68 170 aa12.49□□□□□ -0.41
HLA-DRB1-201ENST00000360004 DNAH11Q96DT5 4516 aa12.48□□□□□ -0.41
HLA-DRB1-201ENST00000360004 IGHV3OR16-9A0A0B4J2B5 98 aa12.48□□□□□ -0.41
HLA-DRB1-201ENST00000360004 SERF1AO75920 110 aa12.48□□□□□ -0.41
HLA-DRB1-201ENST00000360004 ORAOV1Q8WV07 137 aa12.48□□□□□ -0.41
HLA-DRB1-201ENST00000360004 A0A0J9YXV3 536 aa12.47□□□□□ -0.41
HLA-DRB1-201ENST00000360004 CNBPP62633 177 aaKnown RBP12.47□□□□□ -0.41
HLA-DRB1-201ENST00000360004 COX6A2Q02221 97 aa12.47□□□□□ -0.41
HLA-DRB1-201ENST00000360004 SPAG11BQ08648 103 aa12.47□□□□□ -0.41
HLA-DRB1-201ENST00000360004 PDZD11Q5EBL8 140 aa12.47□□□□□ -0.41
HLA-DRB1-201ENST00000360004 FAM19A2Q8N3H0 131 aa12.47□□□□□ -0.41
HLA-DRB1-201ENST00000360004 LINC00526Q96FQ7 95 aa12.47□□□□□ -0.41
HLA-DRB1-201ENST00000360004 PACRGQ96M98 296 aaPredicted RBP12.47□□□□□ -0.41
HLA-DRB1-201ENST00000360004 CST9LQ9H4G1 147 aa12.47□□□□□ -0.41
HLA-DRB1-201ENST00000360004 LINC00469Q8N7U9 141 aa12.46□□□□□ -0.41
HLA-DRB1-201ENST00000360004 OR10D4PQ8NGN7 298 aa12.46□□□□□ -0.41
HLA-DRB1-201ENST00000360004 IGHV3-64A0A075B6Q5 118 aa12.45□□□□□ -0.42
HLA-DRB1-201ENST00000360004 A0A087WZ39 114 aa12.45□□□□□ -0.42
HLA-DRB1-201ENST00000360004 CAMK2N2Q96S95 79 aa12.45□□□□□ -0.42
HLA-DRB1-201ENST00000360004 PKHD1P08F94 4074 aa12.45□□□□□ -0.42
HLA-DRB1-201ENST00000360004 IGLV4-69A0A075B6H9 119 aa12.44□□□□□ -0.42
HLA-DRB1-201ENST00000360004 C9orf163Q8N9P6 203 aa12.44□□□□□ -0.42
HLA-DRB1-201ENST00000360004 IFI27L1Q96BM0 104 aa12.44□□□□□ -0.42
HLA-DRB1-201ENST00000360004 CARD19Q96LW7 228 aa12.44□□□□□ -0.42
HLA-DRB1-201ENST00000360004 TINCRA0A1B0GVN0 87 aa12.43□□□□□ -0.42
HLA-DRB1-201ENST00000360004 HIST1H2BKO60814 126 aa12.43□□□□□ -0.42
HLA-DRB1-201ENST00000360004 HIST1H2BJP06899 126 aa12.43□□□□□ -0.42
HLA-DRB1-201ENST00000360004 PRSS2P07478 247 aa12.43□□□□□ -0.42
HLA-DRB1-201ENST00000360004 HIST1H2BOP23527 126 aa12.43□□□□□ -0.42
HLA-DRB1-201ENST00000360004 HIST1H2BBP33778 126 aa12.43□□□□□ -0.42
HLA-DRB1-201ENST00000360004 HIST1H2BDP58876 126 aa12.43□□□□□ -0.42
HLA-DRB1-201ENST00000360004 HIST1H2BCP62807 126 aa12.43□□□□□ -0.42
HLA-DRB1-201ENST00000360004 SYCNQ0VAF6 134 aa12.43□□□□□ -0.42
HLA-DRB1-201ENST00000360004 HIST2H2BEQ16778 126 aa12.43□□□□□ -0.42
HLA-DRB1-201ENST00000360004 HIST2H2BFQ5QNW6 126 aaPredicted RBP12.43□□□□□ -0.42
HLA-DRB1-201ENST00000360004 FAM19A3Q7Z5A8 133 aa12.43□□□□□ -0.42
HLA-DRB1-201ENST00000360004 HIST1H2BHQ93079 126 aa12.43□□□□□ -0.42
HLA-DRB1-201ENST00000360004 HIST1H2BNQ99877 126 aa12.43□□□□□ -0.42
HLA-DRB1-201ENST00000360004 HIST1H2BMQ99879 126 aa12.43□□□□□ -0.42
HLA-DRB1-201ENST00000360004 CDK2AP2O75956 126 aa12.42□□□□□ -0.42
HLA-DRB1-201ENST00000360004 LEPROTL1O95214 131 aa12.42□□□□□ -0.42
HLA-DRB1-201ENST00000360004 TOMM7Q9P0U1 55 aa12.42□□□□□ -0.42
HLA-DRB1-201ENST00000360004 LINC01561Q8N1V8 128 aa12.41□□□□□ -0.42
HLA-DRB1-201ENST00000360004 CDKN2A-AS1Q9UH64 79 aa12.41□□□□□ -0.42
HLA-DRB1-201ENST00000360004 PKIGQ9Y2B9 76 aa12.41□□□□□ -0.42
HLA-DRB1-201ENST00000360004 H0Y8G0 127 aa12.4□□□□□ -0.42
HLA-DRB1-201ENST00000360004 H3BRM9 83 aa12.4□□□□□ -0.42
HLA-DRB1-201ENST00000360004 SLPIP03973 132 aa12.4□□□□□ -0.42
HLA-DRB1-201ENST00000360004 FABP4P15090 132 aa12.4□□□□□ -0.42
HLA-DRB1-201ENST00000360004 DPH3Q96FX2 82 aa12.4□□□□□ -0.42
HLA-DRB1-201ENST00000360004 C2orf48Q96LS8 159 aa12.4□□□□□ -0.42
HLA-DRB1-201ENST00000360004 CHAC1Q9BUX1 264 aa12.4□□□□□ -0.42
HLA-DRB1-201ENST00000360004 HSPB8Q9UJY1 196 aa12.4□□□□□ -0.42
HLA-DRB1-201ENST00000360004 NDUFA1O15239 70 aa12.39□□□□□ -0.43
HLA-DRB1-201ENST00000360004 CHTOPQ9Y3Y2 248 aaKnown RBP12.39□□□□□ -0.43
HLA-DRB1-201ENST00000360004 DYNC1H1Q14204 4646 aaKnown RBP12.38□□□□□ -0.43
HLA-DRB1-201ENST00000360004 LINC00310P59036 64 aa12.38□□□□□ -0.43
HLA-DRB1-201ENST00000360004 NUPR1O60356 82 aa12.37□□□□□ -0.43
HLA-DRB1-201ENST00000360004 C6orf226Q5I0X4 101 aa12.37□□□□□ -0.43
HLA-DRB1-201ENST00000360004 Q6ZRU5 148 aa12.37□□□□□ -0.43
HLA-DRB1-201ENST00000360004 F8WDY8 70 aa12.36□□□□□ -0.43
HLA-DRB1-201ENST00000360004 IGLC3P0DOY3 106 aa12.36□□□□□ -0.43
HLA-DRB1-201ENST00000360004 CKS1BP61024 79 aa12.36□□□□□ -0.43
HLA-DRB1-201ENST00000360004 HAMPP81172 84 aa12.36□□□□□ -0.43
HLA-DRB1-201ENST00000360004 FAM30AQ9NZY2 134 aa12.36□□□□□ -0.43
HLA-DRB1-201ENST00000360004 TRAV12-1A0A0B4J245 112 aa12.35□□□□□ -0.43
HLA-DRB1-201ENST00000360004 SPINK8P0C7L1 97 aa12.35□□□□□ -0.43
HLA-DRB1-201ENST00000360004 TMEM170BQ5T4T1 132 aa12.35□□□□□ -0.43
HLA-DRB1-201ENST00000360004 DNAH5Q8TE73 4624 aa12.34□□□□□ -0.43
HLA-DRB1-201ENST00000360004 SDIM1Q6ZPB5 146 aa12.34□□□□□ -0.43
HLA-DRB1-201ENST00000360004 IGLV5-45A0A087WSX0 123 aa12.33□□□□□ -0.44
HLA-DRB1-201ENST00000360004 IGKV2-24A0A0C4DH68 120 aa12.33□□□□□ -0.44
HLA-DRB1-201ENST00000360004 Q8IZM0 81 aa12.33□□□□□ -0.44
HLA-DRB1-201ENST00000360004 LOC107984640A0A0U1RRK4 108 aa12.32□□□□□ -0.44
HLA-DRB1-201ENST00000360004 MAP1LC3CQ9BXW4 147 aa12.32□□□□□ -0.44
HLA-DRB1-201ENST00000360004 C11orf86A6NJI1 115 aa12.31□□□□□ -0.44
HLA-DRB1-201ENST00000360004 SMIM1B2RUZ4 78 aa12.31□□□□□ -0.44
HLA-DRB1-201ENST00000360004 F8VRH5 84 aa12.31□□□□□ -0.44
HLA-DRB1-201ENST00000360004 ZNF22P17026 224 aaPredicted RBP12.31□□□□□ -0.44
HLA-DRB1-201ENST00000360004 XGP55808 180 aa12.31□□□□□ -0.44
HLA-DRB1-201ENST00000360004 RPL18AQ02543 176 aaKnown RBP12.31□□□□□ -0.44
HLA-DRB1-201ENST00000360004 C2orf82Q6UX34 121 aa12.31□□□□□ -0.44
HLA-DRB1-201ENST00000360004 UNQ6190/PRO20217Q6UXQ8 127 aa12.31□□□□□ -0.44
HLA-DRB1-201ENST00000360004 Q6ZSA8 131 aa12.31□□□□□ -0.44
HLA-DRB1-201ENST00000360004 COX7B2Q8TF08 81 aa12.31□□□□□ -0.44
HLA-DRB1-201ENST00000360004 MRPL35Q9NZE8 188 aaKnown RBP12.31□□□□□ -0.44
HLA-DRB1-201ENST00000360004 LRP1BQ9NZR2 4599 aa12.3□□□□□ -0.44
HLA-DRB1-201ENST00000360004 GAGE2BQ13066 116 aa12.3□□□□□ -0.44
HLA-DRB1-201ENST00000360004 KIAA0087Q14695 138 aa12.3□□□□□ -0.44
HLA-DRB1-201ENST00000360004 MAJINQ3KP22 176 aa12.3□□□□□ -0.44
HLA-DRB1-201ENST00000360004 CHTF8P0CG12 524 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms