RNA–Protein interactions for RNA: ENST00000359082.3

SHANK1-202, Transcript of SH3 and multiple ankyrin repeat domains 1, humanhuman

TSL 5 BASIC

Gene SHANK1, Length 6,459 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK1-202ENST00000359082 MUC6Q6W4X9 2439 aa13.41□□□□□ -0.26
SHANK1-202ENST00000359082 KLLNB2CW77 178 aa13.4□□□□□ -0.26
SHANK1-202ENST00000359082 Q8N6K4 173 aa13.4□□□□□ -0.26
SHANK1-202ENST00000359082 NCOA6Q14686 2063 aaPredicted RBP13.4□□□□□ -0.26
SHANK1-202ENST00000359082 Q6ZVQ6 151 aa13.4□□□□□ -0.26
SHANK1-202ENST00000359082 CYSRT1A8MQ03 144 aa13.39□□□□□ -0.27
SHANK1-202ENST00000359082 ESRGQ1W209 222 aa13.39□□□□□ -0.27
SHANK1-202ENST00000359082 C1orf195Q5TG92 126 aa13.39□□□□□ -0.27
SHANK1-202ENST00000359082 LINC00474Q9P2X8 69 aa13.39□□□□□ -0.27
SHANK1-202ENST00000359082 M0QXV9 152 aa13.38□□□□□ -0.27
SHANK1-202ENST00000359082 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP13.38□□□□□ -0.27
SHANK1-202ENST00000359082 Q8IZM0 81 aa13.38□□□□□ -0.27
SHANK1-202ENST00000359082 CIRBP-AS1Q8TBR5 109 aa13.38□□□□□ -0.27
SHANK1-202ENST00000359082 KIAA1549Q9HCM3 1950 aa13.38□□□□□ -0.27
SHANK1-202ENST00000359082 IGLV1-40P01703 118 aa13.37□□□□□ -0.27
SHANK1-202ENST00000359082 OXLD1Q5BKU9 147 aa13.37□□□□□ -0.27
SHANK1-202ENST00000359082 CDC42SE2Q9NRR3 84 aa13.37□□□□□ -0.27
SHANK1-202ENST00000359082 TNCP24821 2201 aa13.36□□□□□ -0.27
SHANK1-202ENST00000359082 C9orf116Q5BN46 136 aaPredicted RBP13.36□□□□□ -0.27
SHANK1-202ENST00000359082 MRGPRG-AS1Q2M3A8 158 aa13.36□□□□□ -0.27
SHANK1-202ENST00000359082 CRIP2P52943 208 aaPredicted RBP13.36□□□□□ -0.27
SHANK1-202ENST00000359082 LINC00694P0DN24 101 aa13.36□□□□□ -0.27
SHANK1-202ENST00000359082 POLR2KP53803 58 aaKnown RBP13.35□□□□□ -0.27
SHANK1-202ENST00000359082 Q6JHZ5 121 aa13.33□□□□□ -0.28
SHANK1-202ENST00000359082 REG3GQ6UW15 175 aa13.33□□□□□ -0.28
SHANK1-202ENST00000359082 SMR3AQ99954 134 aa13.33□□□□□ -0.28
SHANK1-202ENST00000359082 UNQ6190/PRO20217Q6UXQ8 127 aa13.33□□□□□ -0.28
SHANK1-202ENST00000359082 COX6A2Q02221 97 aa13.33□□□□□ -0.28
SHANK1-202ENST00000359082 IGHV6-1A0A0B4J1U7 121 aa13.31□□□□□ -0.28
SHANK1-202ENST00000359082 SMIM26A0A096LP01 95 aa13.3□□□□□ -0.28
SHANK1-202ENST00000359082 PRR3P79522 188 aaKnown RBP13.3□□□□□ -0.28
SHANK1-202ENST00000359082 X6R8D5 127 aa13.3□□□□□ -0.28
SHANK1-202ENST00000359082 C6orf223Q8N319 242 aa13.3□□□□□ -0.28
SHANK1-202ENST00000359082 NUPR2A6NF83 97 aa13.3□□□□□ -0.28
SHANK1-202ENST00000359082 Q6Q795 121 aa13.3□□□□□ -0.28
SHANK1-202ENST00000359082 A0A087WYN8 130 aa13.3□□□□□ -0.28
SHANK1-202ENST00000359082 RPL28P46779 137 aaKnown RBP13.29□□□□□ -0.28
SHANK1-202ENST00000359082 NTM-AS1Q6ZSK4 140 aa13.29□□□□□ -0.28
SHANK1-202ENST00000359082 Q8N814 137 aa13.29□□□□□ -0.28
SHANK1-202ENST00000359082 TRBV10-3A0A0K0K1G6 114 aa13.29□□□□□ -0.28
SHANK1-202ENST00000359082 IGLV5-52A0A0A0MRZ9 124 aa13.28□□□□□ -0.28
SHANK1-202ENST00000359082 C1orf137Q5JT78 98 aa13.27□□□□□ -0.28
SHANK1-202ENST00000359082 BRI3O95415 125 aa13.27□□□□□ -0.28
SHANK1-202ENST00000359082 LINC00242Q5T6M2 205 aa13.27□□□□□ -0.28
SHANK1-202ENST00000359082 IGIPA6NJ69 53 aa13.27□□□□□ -0.29
SHANK1-202ENST00000359082 CEP192Q8TEP8 1941 aa13.27□□□□□ -0.29
SHANK1-202ENST00000359082 TANC2Q9HCD6 1990 aa13.27□□□□□ -0.29
SHANK1-202ENST00000359082 ZFHX2Q9C0A1 2572 aaPredicted RBP13.27□□□□□ -0.29
SHANK1-202ENST00000359082 LINC00208Q96KT6 92 aa13.27□□□□□ -0.29
SHANK1-202ENST00000359082 SOSTDC1Q6X4U4 206 aa13.25□□□□□ -0.29
SHANK1-202ENST00000359082 CDSNQ15517 529 aa13.25□□□□□ -0.29
SHANK1-202ENST00000359082 CHCHD7Q9BUK0 85 aa13.25□□□□□ -0.29
SHANK1-202ENST00000359082 AVPP01185 164 aa13.24□□□□□ -0.29
SHANK1-202ENST00000359082 SRCAPQ6ZRS2 3230 aa13.24□□□□□ -0.29
SHANK1-202ENST00000359082 IGLV4-60A0A075B6I1 120 aa13.24□□□□□ -0.29
SHANK1-202ENST00000359082 A0A087WVE0 104 aa13.23□□□□□ -0.29
SHANK1-202ENST00000359082 TRBV7-6A0A0J9YX20 115 aa13.23□□□□□ -0.29
SHANK1-202ENST00000359082 SMIM1B2RUZ4 78 aa13.23□□□□□ -0.29
SHANK1-202ENST00000359082 PCOTHQ58A44 107 aa13.22□□□□□ -0.29
SHANK1-202ENST00000359082 PLA2G2AP14555 144 aa13.22□□□□□ -0.29
SHANK1-202ENST00000359082 EGFEM1PQ0D2K5 195 aa13.22□□□□□ -0.29
SHANK1-202ENST00000359082 LINC01556Q5JQF7 62 aa13.22□□□□□ -0.29
SHANK1-202ENST00000359082 MUC7Q8TAX7 377 aa13.22□□□□□ -0.29
SHANK1-202ENST00000359082 TRAV7A0A075B6U4 112 aa13.21□□□□□ -0.29
SHANK1-202ENST00000359082 ODF3L2Q3SX64 289 aa13.21□□□□□ -0.29
SHANK1-202ENST00000359082 SPINK1P00995 79 aa13.21□□□□□ -0.29
SHANK1-202ENST00000359082 FREM1Q5H8C1 2179 aa13.21□□□□□ -0.29
SHANK1-202ENST00000359082 DEFB116Q30KQ4 102 aa13.2□□□□□ -0.3
SHANK1-202ENST00000359082 Q9BRP9 147 aa13.2□□□□□ -0.3
SHANK1-202ENST00000359082 LINC01547P58512 204 aaPredicted RBP13.2□□□□□ -0.3
SHANK1-202ENST00000359082 TSPEAR-AS2P59090 65 aa13.2□□□□□ -0.3
SHANK1-202ENST00000359082 PRYO14603 147 aa13.19□□□□□ -0.3
SHANK1-202ENST00000359082 Q6ZTC4 211 aa13.18□□□□□ -0.3
SHANK1-202ENST00000359082 FHL2Q14192 279 aa13.18□□□□□ -0.3
SHANK1-202ENST00000359082 MUC22E2RYF6 1773 aaPredicted RBP13.17□□□□□ -0.3
SHANK1-202ENST00000359082 CNFNQ9BYD5 112 aa13.17□□□□□ -0.3
SHANK1-202ENST00000359082 PMAIP1Q13794 54 aa13.17□□□□□ -0.3
SHANK1-202ENST00000359082 ADAMTSL4-AS1Q5T5F5 129 aa13.16□□□□□ -0.3
SHANK1-202ENST00000359082 LINC00310P59036 64 aa13.16□□□□□ -0.3
SHANK1-202ENST00000359082 ZNF580Q9UK33 172 aa13.16□□□□□ -0.3
SHANK1-202ENST00000359082 KRTAP10-9P60411 292 aa13.15□□□□□ -0.3
SHANK1-202ENST00000359082 URB1-AS1Q96HZ7 61 aa13.15□□□□□ -0.3
SHANK1-202ENST00000359082 LINC00575Q6W349 94 aa13.15□□□□□ -0.31
SHANK1-202ENST00000359082 BEAN1Q3B7T3 259 aa13.14□□□□□ -0.31
SHANK1-202ENST00000359082 PCDH15Q96QU1 1955 aa13.14□□□□□ -0.31
SHANK1-202ENST00000359082 DSCAMO60469 2012 aa13.13□□□□□ -0.31
SHANK1-202ENST00000359082 FAM208BQ5VWN6 2430 aa13.12□□□□□ -0.31
SHANK1-202ENST00000359082 Q6ZSN1 163 aa13.12□□□□□ -0.31
SHANK1-202ENST00000359082 H0Y9P7 68 aa13.12□□□□□ -0.31
SHANK1-202ENST00000359082 PSPHP1O15172 72 aa13.12□□□□□ -0.31
SHANK1-202ENST00000359082 SBSPONQ8IVN8 264 aa13.12□□□□□ -0.31
SHANK1-202ENST00000359082 IGLV1-51P01701 117 aa13.11□□□□□ -0.31
SHANK1-202ENST00000359082 PTPRQQ9UMZ3 2332 aa13.11□□□□□ -0.31
SHANK1-202ENST00000359082 MED12LQ86YW9 2145 aa13.1□□□□□ -0.31
SHANK1-202ENST00000359082 WNK1Q9H4A3 2382 aa13.1□□□□□ -0.31
SHANK1-202ENST00000359082 TRBV7-7A0A0K0K1E9 115 aa13.1□□□□□ -0.31
SHANK1-202ENST00000359082 ATG2AQ2TAZ0 1938 aa13.1□□□□□ -0.31
SHANK1-202ENST00000359082 A0A087WSZ3 146 aa13.09□□□□□ -0.31
SHANK1-202ENST00000359082 PCNX3Q9H6A9 2034 aa13.09□□□□□ -0.31
SHANK1-202ENST00000359082 Q8N3U1 123 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 908.9 ms