RNA–Protein interactions for RNA: ENST00000359052.8

SMARCAD1-202, Transcript of SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1, humanhuman

APPRIS ALT1 TSL 1 (best)

Gene SMARCAD1, Length 5,017 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAD1-202ENST00000359052 FAM236BA0A1B0GV22 79 aa0.96□□□□□ -2.26
SMARCAD1-202ENST00000359052 FAM223BA6NKX1 122 aa0.96□□□□□ -2.26
SMARCAD1-202ENST00000359052 I3L2K1 104 aa0.96□□□□□ -2.26
SMARCAD1-202ENST00000359052 ROMO1P60602 79 aa0.96□□□□□ -2.26
SMARCAD1-202ENST00000359052 HBG1P69891 147 aa0.96□□□□□ -2.26
SMARCAD1-202ENST00000359052 HBG2P69892 147 aa0.96□□□□□ -2.26
SMARCAD1-202ENST00000359052 LYZL1Q6UWQ5 148 aa0.96□□□□□ -2.26
SMARCAD1-202ENST00000359052 LINC00643Q86TS7 51 aa0.96□□□□□ -2.26
SMARCAD1-202ENST00000359052 SERP2Q8N6R1 65 aa0.96□□□□□ -2.26
SMARCAD1-202ENST00000359052 SPACA4Q8TDM5 124 aa0.96□□□□□ -2.26
SMARCAD1-202ENST00000359052 ASCC3Q8N3C0 2202 aaKnown RBP0.96□□□□□ -2.26
SMARCAD1-202ENST00000359052 IGHV3-15A0A0B4J1V0 119 aa0.96□□□□□ -2.26
SMARCAD1-202ENST00000359052 TRAV5A0A0B4J249 113 aa0.96□□□□□ -2.26
SMARCAD1-202ENST00000359052 C3orf85A0A1B0GTC6 90 aa0.96□□□□□ -2.26
SMARCAD1-202ENST00000359052 K7ERJ3 54 aa0.96□□□□□ -2.26
SMARCAD1-202ENST00000359052 NDUFC2O95298 119 aa0.96□□□□□ -2.26
SMARCAD1-202ENST00000359052 ACYP1P07311 99 aa0.96□□□□□ -2.26
SMARCAD1-202ENST00000359052 CST6Q15828 149 aa0.96□□□□□ -2.26
SMARCAD1-202ENST00000359052 LINC00474Q9P2X8 69 aa0.96□□□□□ -2.26
SMARCAD1-202ENST00000359052 OBSCNQ5VST9 7968 aa0.96□□□□□ -2.26
SMARCAD1-202ENST00000359052 SRRM2Q9UQ35 2752 aaKnown RBP0.96□□□□□ -2.26
SMARCAD1-202ENST00000359052 A0A0J9YW62 118 aa0.96□□□□□ -2.26
SMARCAD1-202ENST00000359052 FAM24AA6NFZ4 105 aa0.96□□□□□ -2.26
SMARCAD1-202ENST00000359052 C11orf86A6NJI1 115 aa0.96□□□□□ -2.26
SMARCAD1-202ENST00000359052 MIFP14174 115 aa0.96□□□□□ -2.26
SMARCAD1-202ENST00000359052 RPL38P63173 70 aaKnown RBP0.96□□□□□ -2.26
SMARCAD1-202ENST00000359052 CCL8P80075 99 aa0.96□□□□□ -2.26
SMARCAD1-202ENST00000359052 ARFRP1Q13795 201 aa0.96□□□□□ -2.26
SMARCAD1-202ENST00000359052 HES1Q14469 280 aa0.96□□□□□ -2.26
SMARCAD1-202ENST00000359052 C2orf83Q53S99 150 aa0.96□□□□□ -2.26
SMARCAD1-202ENST00000359052 HRCT1Q6UXD1 115 aa0.96□□□□□ -2.26
SMARCAD1-202ENST00000359052 FAM19A2Q8N3H0 131 aa0.96□□□□□ -2.26
SMARCAD1-202ENST00000359052 METTL27Q8N6F8 245 aaPredicted RBP0.96□□□□□ -2.26
SMARCAD1-202ENST00000359052 OR5C1Q8NGR4 320 aa0.96□□□□□ -2.26
SMARCAD1-202ENST00000359052 ARHGAP5-AS1Q96IT6 56 aa0.96□□□□□ -2.26
SMARCAD1-202ENST00000359052 KNTC1P50748 2209 aa0.96□□□□□ -2.26
SMARCAD1-202ENST00000359052 IGKCP01834 107 aa0.95□□□□□ -2.26
SMARCAD1-202ENST00000359052 IGHV1-8P0DP01 117 aa0.95□□□□□ -2.26
SMARCAD1-202ENST00000359052 NTF3P20783 257 aa0.95□□□□□ -2.26
SMARCAD1-202ENST00000359052 CD52P31358 61 aa0.95□□□□□ -2.26
SMARCAD1-202ENST00000359052 SMIM11AP58511 58 aa0.95□□□□□ -2.26
SMARCAD1-202ENST00000359052 C1DQ13901 141 aaKnown RBP0.95□□□□□ -2.26
SMARCAD1-202ENST00000359052 TAS2R4Q9NYW5 299 aa0.95□□□□□ -2.26
SMARCAD1-202ENST00000359052 GNG8Q9UK08 70 aa0.95□□□□□ -2.26
SMARCAD1-202ENST00000359052 LOC389332A0A1B0GUA5 103 aa0.95□□□□□ -2.26
SMARCAD1-202ENST00000359052 PRSS1P07477 247 aa0.95□□□□□ -2.26
SMARCAD1-202ENST00000359052 KCNIP1Q9NZI2 227 aa0.95□□□□□ -2.26
SMARCAD1-202ENST00000359052 ASF1AQ9Y294 204 aa0.95□□□□□ -2.26
SMARCAD1-202ENST00000359052 SPCS1Q9Y6A9 102 aa0.95□□□□□ -2.26
SMARCAD1-202ENST00000359052 ABCA12Q86UK0 2595 aa0.95□□□□□ -2.26
SMARCAD1-202ENST00000359052 USH2AO75445 5202 aa0.95□□□□□ -2.26
SMARCAD1-202ENST00000359052 IGHV1-69DA0A0B4J2H0 117 aa0.95□□□□□ -2.26
SMARCAD1-202ENST00000359052 IGHV1-58A0A0C4DH39 117 aa0.95□□□□□ -2.26
SMARCAD1-202ENST00000359052 TRBV27A0A0K0K1C4 114 aa0.95□□□□□ -2.26
SMARCAD1-202ENST00000359052 HSBP1O75506 76 aa0.95□□□□□ -2.26
SMARCAD1-202ENST00000359052 KRTAP10-10P60014 251 aa0.95□□□□□ -2.26
SMARCAD1-202ENST00000359052 DAD1P61803 113 aa0.95□□□□□ -2.26
SMARCAD1-202ENST00000359052 PPP1CAP62136 330 aa0.95□□□□□ -2.26
SMARCAD1-202ENST00000359052 LINC00596Q86U02 117 aa0.95□□□□□ -2.26
SMARCAD1-202ENST00000359052 C1orf64Q8NEQ6 169 aa0.95□□□□□ -2.26
SMARCAD1-202ENST00000359052 NABP2Q9BQ15 211 aa0.95□□□□□ -2.26
SMARCAD1-202ENST00000359052 TTTY13Q9BZ97 58 aa0.95□□□□□ -2.26
SMARCAD1-202ENST00000359052 TRAPPC1Q9Y5R8 145 aa0.95□□□□□ -2.26
SMARCAD1-202ENST00000359052 IGHV3OR16-8A0A075B7F1 116 aa0.95□□□□□ -2.26
SMARCAD1-202ENST00000359052 IGKV3D-15A0A087WSY6 115 aa0.95□□□□□ -2.26
SMARCAD1-202ENST00000359052 TEX49A0A1B0GTD5 131 aa0.95□□□□□ -2.26
SMARCAD1-202ENST00000359052 H7C1C5 153 aa0.95□□□□□ -2.26
SMARCAD1-202ENST00000359052 ST20-AS1Q8NBB2 130 aa0.95□□□□□ -2.26
SMARCAD1-202ENST00000359052 NAA38Q9BRA0 125 aaKnown RBP0.95□□□□□ -2.26
SMARCAD1-202ENST00000359052 LIMD2Q9BT23 127 aa0.95□□□□□ -2.26
SMARCAD1-202ENST00000359052 TMEM243Q9BU79 118 aa0.95□□□□□ -2.26
SMARCAD1-202ENST00000359052 IGHV3-66A0A0C4DH42 116 aa0.94□□□□□ -2.26
SMARCAD1-202ENST00000359052 A0A1B0GWA3 101 aa0.94□□□□□ -2.26
SMARCAD1-202ENST00000359052 H3BUT2 72 aa0.94□□□□□ -2.26
SMARCAD1-202ENST00000359052 J3QKU1 62 aa0.94□□□□□ -2.26
SMARCAD1-202ENST00000359052 IGLV1-47P01700 117 aa0.94□□□□□ -2.26
SMARCAD1-202ENST00000359052 Q8N6K4 173 aa0.94□□□□□ -2.26
SMARCAD1-202ENST00000359052 LINC00527Q9UJ94 153 aa0.94□□□□□ -2.26
SMARCAD1-202ENST00000359052 CACNA1DQ01668 2161 aa0.94□□□□□ -2.26
SMARCAD1-202ENST00000359052 NAV3Q8IVL0 2385 aa0.94□□□□□ -2.26
SMARCAD1-202ENST00000359052 DOPEY1Q5JWR5 2465 aa0.94□□□□□ -2.26
SMARCAD1-202ENST00000359052 TRACP01848 142 aa0.94□□□□□ -2.26
SMARCAD1-202ENST00000359052 DEFA4P12838 97 aa0.94□□□□□ -2.26
SMARCAD1-202ENST00000359052 S100A3P33764 101 aa0.94□□□□□ -2.26
SMARCAD1-202ENST00000359052 LINC00269Q8N2A0 174 aa0.94□□□□□ -2.26
SMARCAD1-202ENST00000359052 LINC00467Q9BRT7 94 aa0.94□□□□□ -2.26
SMARCAD1-202ENST00000359052 NDUFA4L2Q9NRX3 87 aa0.94□□□□□ -2.26
SMARCAD1-202ENST00000359052 M0R2N4 97 aa0.94□□□□□ -2.26
SMARCAD1-202ENST00000359052 HMGN2P05204 90 aaKnown RBP0.94□□□□□ -2.26
SMARCAD1-202ENST00000359052 DEFB112Q30KQ8 113 aa0.94□□□□□ -2.26
SMARCAD1-202ENST00000359052 MEIG1Q5JSS6 88 aa0.94□□□□□ -2.26
SMARCAD1-202ENST00000359052 GTF2H5Q6ZYL4 71 aa0.94□□□□□ -2.26
SMARCAD1-202ENST00000359052 C6orf201Q7Z4U5 140 aa0.94□□□□□ -2.26
SMARCAD1-202ENST00000359052 IMMP1LQ96LU5 166 aa0.94□□□□□ -2.26
SMARCAD1-202ENST00000359052 KCNQ1DNQ9H478 68 aa0.94□□□□□ -2.26
SMARCAD1-202ENST00000359052 MUC6Q6W4X9 2439 aa0.94□□□□□ -2.26
SMARCAD1-202ENST00000359052 USP9YO00507 2555 aaPredicted RBP0.94□□□□□ -2.26
SMARCAD1-202ENST00000359052 ZNF73O43830 326 aaPredicted RBP0.94□□□□□ -2.26
SMARCAD1-202ENST00000359052 IGLV1-44P01699 117 aa0.94□□□□□ -2.26
SMARCAD1-202ENST00000359052 PET100P0DJ07 73 aa0.94□□□□□ -2.26
Retrieved 100 of 20,778 RNA–protein pairs in 78.1 ms