RNA–Protein interactions for RNA: ENST00000356887.11

GYPC-202, Transcript of glycophorin C (Gerbich blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene GYPC, Length 2,067 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPC-202ENST00000356887 C11orf44Q8N8P7 122 aa12.62□□□□□ -0.39
GYPC-202ENST00000356887 COX6CP09669 75 aa12.61□□□□□ -0.39
GYPC-202ENST00000356887 DAZ2Q13117 558 aaKnown RBP12.61□□□□□ -0.39
GYPC-202ENST00000356887 DAZ4Q86SG3 579 aaKnown RBP12.61□□□□□ -0.39
GYPC-202ENST00000356887 DAND5Q8N907 189 aa12.61□□□□□ -0.39
GYPC-202ENST00000356887 DAZ3Q9NR90 486 aaKnown RBP12.61□□□□□ -0.39
GYPC-202ENST00000356887 TRAV4A0A0B4J268 109 aa12.61□□□□□ -0.39
GYPC-202ENST00000356887 RPL13AP40429 203 aaKnown RBP12.61□□□□□ -0.39
GYPC-202ENST00000356887 CIRBPQ14011 172 aaKnown RBP12.61□□□□□ -0.39
GYPC-202ENST00000356887 ACANP16112 2415 aa12.61□□□□□ -0.39
GYPC-202ENST00000356887 NOTCH2Q04721 2471 aa12.6□□□□□ -0.39
GYPC-202ENST00000356887 MRAPQ8TCY5 172 aa12.6□□□□□ -0.39
GYPC-202ENST00000356887 NDUFA7O95182 113 aa12.6□□□□□ -0.39
GYPC-202ENST00000356887 Q9H8V8 135 aa12.6□□□□□ -0.39
GYPC-202ENST00000356887 H7C423 109 aa12.59□□□□□ -0.39
GYPC-202ENST00000356887 KRTAP1-1Q07627 177 aa12.59□□□□□ -0.39
GYPC-202ENST00000356887 SMIM1B2RUZ4 78 aa12.58□□□□□ -0.39
GYPC-202ENST00000356887 LINC00308Q8TCZ7 52 aa12.58□□□□□ -0.39
GYPC-202ENST00000356887 ESM1Q9NQ30 184 aa12.58□□□□□ -0.39
GYPC-202ENST00000356887 CDC42SE2Q9NRR3 84 aa12.58□□□□□ -0.39
GYPC-202ENST00000356887 CLEC2BQ92478 149 aa12.58□□□□□ -0.4
GYPC-202ENST00000356887 SONP18583 2426 aaKnown RBP12.58□□□□□ -0.4
GYPC-202ENST00000356887 TEX49A0A1B0GTD5 131 aa12.57□□□□□ -0.4
GYPC-202ENST00000356887 LST1O00453 97 aa12.57□□□□□ -0.4
GYPC-202ENST00000356887 GIG44P09565 113 aaPredicted RBP12.57□□□□□ -0.4
GYPC-202ENST00000356887 C2orf82Q6UX34 121 aa12.57□□□□□ -0.4
GYPC-202ENST00000356887 TRAV13-1A0A0B4J241 112 aa12.57□□□□□ -0.4
GYPC-202ENST00000356887 NOP10Q9NPE3 64 aaKnown RBP12.57□□□□□ -0.4
GYPC-202ENST00000356887 H3BT86 120 aa12.56□□□□□ -0.4
GYPC-202ENST00000356887 F5H768 121 aa12.55□□□□□ -0.4
GYPC-202ENST00000356887 CMC4P56277 68 aaPredicted RBP12.55□□□□□ -0.4
GYPC-202ENST00000356887 UBE2WQ96B02 151 aa12.55□□□□□ -0.4
GYPC-202ENST00000356887 ZNF625Q96I27 306 aaPredicted RBP12.55□□□□□ -0.4
GYPC-202ENST00000356887 PLAC8L1A1L4L8 177 aa12.54□□□□□ -0.4
GYPC-202ENST00000356887 F8WDY8 70 aa12.54□□□□□ -0.4
GYPC-202ENST00000356887 FAM19A5Q7Z5A7 132 aaPredicted RBP12.54□□□□□ -0.4
GYPC-202ENST00000356887 SOSTDC1Q6X4U4 206 aa12.53□□□□□ -0.4
GYPC-202ENST00000356887 BAHCC1Q9P281 2608 aa12.53□□□□□ -0.4
GYPC-202ENST00000356887 CRLF1O75462 422 aa12.53□□□□□ -0.4
GYPC-202ENST00000356887 WNK1Q9H4A3 2382 aa12.53□□□□□ -0.4
GYPC-202ENST00000356887 A0A0U1RRA0 63 aa12.52□□□□□ -0.4
GYPC-202ENST00000356887 COPS9Q8WXC6 57 aa12.52□□□□□ -0.4
GYPC-202ENST00000356887 C16orf74Q96GX8 76 aa12.52□□□□□ -0.4
GYPC-202ENST00000356887 TMEM243Q9BU79 118 aa12.52□□□□□ -0.4
GYPC-202ENST00000356887 TRAV8-4A0A0B4J246 113 aa12.52□□□□□ -0.41
GYPC-202ENST00000356887 TRBV7-7A0A0K0K1E9 115 aa12.51□□□□□ -0.41
GYPC-202ENST00000356887 PRIMA1Q86XR5 153 aa12.51□□□□□ -0.41
GYPC-202ENST00000356887 IMUPQ9GZP8 106 aa12.51□□□□□ -0.41
GYPC-202ENST00000356887 UBE2L6O14933 153 aa12.5□□□□□ -0.41
GYPC-202ENST00000356887 LINC01006Q8NI28 216 aa12.5□□□□□ -0.41
GYPC-202ENST00000356887 SMR3AQ99954 134 aa12.5□□□□□ -0.41
GYPC-202ENST00000356887 WFDC10AQ9H1F0 79 aa12.5□□□□□ -0.41
GYPC-202ENST00000356887 C19orf73Q9NVV2 129 aa12.5□□□□□ -0.41
GYPC-202ENST00000356887 ANK3Q12955 4377 aaKnown RBP12.5□□□□□ -0.41
GYPC-202ENST00000356887 ATP5G1P05496 136 aa12.5□□□□□ -0.41
GYPC-202ENST00000356887 OVOL2Q9BRP0 275 aa12.5□□□□□ -0.41
GYPC-202ENST00000356887 OTOGQ6ZRI0 2925 aa12.49□□□□□ -0.41
GYPC-202ENST00000356887 LOC100131303A0A0U1RQF7 123 aa12.49□□□□□ -0.41
GYPC-202ENST00000356887 RPL35AP18077 110 aaKnown RBP12.49□□□□□ -0.41
GYPC-202ENST00000356887 DEFB121Q5J5C9 76 aa12.49□□□□□ -0.41
GYPC-202ENST00000356887 C16orf95Q9H693 158 aa12.49□□□□□ -0.41
GYPC-202ENST00000356887 TRGV2A0A075B6R0 118 aa12.49□□□□□ -0.41
GYPC-202ENST00000356887 FAM240AA0A1B0GVK7 77 aa12.49□□□□□ -0.41
GYPC-202ENST00000356887 TRBV6-4A0A1B0GX49 114 aa12.49□□□□□ -0.41
GYPC-202ENST00000356887 CSNK1G2-AS1Q8NCQ2 148 aa12.49□□□□□ -0.41
GYPC-202ENST00000356887 UQCRQO14949 82 aa12.48□□□□□ -0.41
GYPC-202ENST00000356887 IGLV1-51P01701 117 aa12.48□□□□□ -0.41
GYPC-202ENST00000356887 C15orf53Q8NAA6 179 aa12.48□□□□□ -0.41
GYPC-202ENST00000356887 COX7A2LO14548 114 aa12.47□□□□□ -0.41
GYPC-202ENST00000356887 C3orf22Q8N5N4 141 aa12.47□□□□□ -0.41
GYPC-202ENST00000356887 FLNBO75369 2602 aaKnown RBP12.47□□□□□ -0.41
GYPC-202ENST00000356887 RNASE1P07998 156 aaKnown RBP12.46□□□□□ -0.42
GYPC-202ENST00000356887 LINC00526Q96FQ7 95 aa12.46□□□□□ -0.42
GYPC-202ENST00000356887 TRGV4A0A0C4DH28 118 aa12.44□□□□□ -0.42
GYPC-202ENST00000356887 C9orf153Q5TBE3 101 aa12.44□□□□□ -0.42
GYPC-202ENST00000356887 LY6G6DO95868 133 aa12.44□□□□□ -0.42
GYPC-202ENST00000356887 KIR2DL5BQ8NHK3 375 aa12.44□□□□□ -0.42
GYPC-202ENST00000356887 MTORP42345 2549 aa12.43□□□□□ -0.42
GYPC-202ENST00000356887 FHL2Q14192 279 aa12.43□□□□□ -0.42
GYPC-202ENST00000356887 COX7B2Q8TF08 81 aa12.42□□□□□ -0.42
GYPC-202ENST00000356887 NF1P21359 2839 aa12.42□□□□□ -0.42
GYPC-202ENST00000356887 HIVEP2P31629 2446 aa12.42□□□□□ -0.42
GYPC-202ENST00000356887 LOC107984640A0A0U1RRK4 108 aa12.42□□□□□ -0.42
GYPC-202ENST00000356887 SETXQ7Z333 2677 aaKnown RBP12.41□□□□□ -0.42
GYPC-202ENST00000356887 NOTCH3Q9UM47 2321 aa12.41□□□□□ -0.42
GYPC-202ENST00000356887 CUBNO60494 3623 aa12.41□□□□□ -0.42
GYPC-202ENST00000356887 IGLV4-60A0A075B6I1 120 aa12.41□□□□□ -0.42
GYPC-202ENST00000356887 TRBV6-8A0A0A6YYG3 113 aa12.41□□□□□ -0.42
GYPC-202ENST00000356887 CYSRT1A8MQ03 144 aa12.39□□□□□ -0.43
GYPC-202ENST00000356887 TRACP01848 142 aa12.39□□□□□ -0.43
GYPC-202ENST00000356887 CHCHD5Q9BSY4 110 aa12.39□□□□□ -0.43
GYPC-202ENST00000356887 C2CD3Q4AC94 2353 aa12.38□□□□□ -0.43
GYPC-202ENST00000356887 JMJD1CQ15652 2540 aa12.38□□□□□ -0.43
GYPC-202ENST00000356887 IGHV3OR16-9A0A0B4J2B5 98 aa12.38□□□□□ -0.43
GYPC-202ENST00000356887 IGKV3OR2-268A0A0C4DH90 116 aa12.38□□□□□ -0.43
GYPC-202ENST00000356887 PF4P02776 101 aa12.38□□□□□ -0.43
GYPC-202ENST00000356887 MIR7-3HGQ8N6C7 128 aa12.38□□□□□ -0.43
GYPC-202ENST00000356887 TRAV13-2A0A0B4J235 113 aa12.37□□□□□ -0.43
GYPC-202ENST00000356887 TOMM7Q9P0U1 55 aa12.37□□□□□ -0.43
GYPC-202ENST00000356887 HIVEP1P15822 2718 aa12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 67 ms