RNA–Protein interactions for RNA: ENST00000355947.6

TRIM4-203, Transcript of tripartite motif containing 4, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene TRIM4, Length 3,383 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM4-203ENST00000355947 NOP10Q9NPE3 64 aaKnown RBP9.81□□□□□ -0.84
TRIM4-203ENST00000355947 A0A096LPF7 62 aa9.81□□□□□ -0.84
TRIM4-203ENST00000355947 SND1-IT1Q9HBX3 110 aa9.81□□□□□ -0.84
TRIM4-203ENST00000355947 LECT2O14960 151 aa9.8□□□□□ -0.84
TRIM4-203ENST00000355947 CFAP161Q6P656 301 aa9.8□□□□□ -0.84
TRIM4-203ENST00000355947 NCR3O14931 201 aa9.8□□□□□ -0.84
TRIM4-203ENST00000355947 INSP01308 110 aa9.8□□□□□ -0.84
TRIM4-203ENST00000355947 M0QXV9 152 aa9.8□□□□□ -0.84
TRIM4-203ENST00000355947 WFDC9Q8NEX5 89 aa9.8□□□□□ -0.84
TRIM4-203ENST00000355947 SMIM1B2RUZ4 78 aa9.79□□□□□ -0.84
TRIM4-203ENST00000355947 FAM110AQ9BQ89 295 aa9.79□□□□□ -0.84
TRIM4-203ENST00000355947 A0A1B0GX51 115 aa9.78□□□□□ -0.84
TRIM4-203ENST00000355947 UCNP55089 124 aa9.78□□□□□ -0.84
TRIM4-203ENST00000355947 KLK9Q2XQG4 91 aa9.78□□□□□ -0.84
TRIM4-203ENST00000355947 LINC00643Q86TS7 51 aa9.78□□□□□ -0.84
TRIM4-203ENST00000355947 C9orf129Q5T035 196 aaKnown RBP9.78□□□□□ -0.84
TRIM4-203ENST00000355947 A0A087WYN8 130 aa9.77□□□□□ -0.84
TRIM4-203ENST00000355947 WFDC10AQ9H1F0 79 aa9.77□□□□□ -0.84
TRIM4-203ENST00000355947 MAP6D1Q9H9H5 199 aa9.77□□□□□ -0.84
TRIM4-203ENST00000355947 VPREB3Q9UKI3 123 aa9.77□□□□□ -0.84
TRIM4-203ENST00000355947 MALP21145 153 aa9.77□□□□□ -0.85
TRIM4-203ENST00000355947 TRGV4A0A0C4DH28 118 aa9.76□□□□□ -0.85
TRIM4-203ENST00000355947 C3orf22Q8N5N4 141 aa9.76□□□□□ -0.85
TRIM4-203ENST00000355947 PEMTQ9UBM1 199 aa9.76□□□□□ -0.85
TRIM4-203ENST00000355947 DEFB130BP0DP73 79 aa9.75□□□□□ -0.85
TRIM4-203ENST00000355947 DEFB130AP0DP74 79 aa9.75□□□□□ -0.85
TRIM4-203ENST00000355947 LINC00337Q8N6G1 96 aa9.75□□□□□ -0.85
TRIM4-203ENST00000355947 Q96MF0 132 aa9.75□□□□□ -0.85
TRIM4-203ENST00000355947 INAFM2P0DMQ5 153 aa9.74□□□□□ -0.85
TRIM4-203ENST00000355947 XCL1P47992 114 aa9.74□□□□□ -0.85
TRIM4-203ENST00000355947 PRR3P79522 188 aaKnown RBP9.74□□□□□ -0.85
TRIM4-203ENST00000355947 TMEM243Q9BU79 118 aa9.74□□□□□ -0.85
TRIM4-203ENST00000355947 FAM240AA0A1B0GVK7 77 aa9.74□□□□□ -0.85
TRIM4-203ENST00000355947 PRB1P04280 392 aa9.74□□□□□ -0.85
TRIM4-203ENST00000355947 C6orf226Q5I0X4 101 aa9.74□□□□□ -0.85
TRIM4-203ENST00000355947 NTM-AS1Q6ZSK4 140 aa9.74□□□□□ -0.85
TRIM4-203ENST00000355947 SMIM11BQ8TCY0 68 aa9.74□□□□□ -0.85
TRIM4-203ENST00000355947 BRI3O95415 125 aa9.73□□□□□ -0.85
TRIM4-203ENST00000355947 HIST2H2BCQ6DN03 193 aa9.73□□□□□ -0.85
TRIM4-203ENST00000355947 TRBV7-7A0A0K0K1E9 115 aa9.73□□□□□ -0.85
TRIM4-203ENST00000355947 ACYP1P07311 99 aa9.73□□□□□ -0.85
TRIM4-203ENST00000355947 COPS9Q8WXC6 57 aa9.73□□□□□ -0.85
TRIM4-203ENST00000355947 TMEM126AQ9H061 195 aa9.72□□□□□ -0.85
TRIM4-203ENST00000355947 FLNAP21333 2647 aaKnown RBP9.72□□□□□ -0.85
TRIM4-203ENST00000355947 SETXQ7Z333 2677 aaKnown RBP9.72□□□□□ -0.85
TRIM4-203ENST00000355947 K7EQD1 137 aa9.72□□□□□ -0.85
TRIM4-203ENST00000355947 UQCRQO14949 82 aa9.72□□□□□ -0.85
TRIM4-203ENST00000355947 COX7B2Q8TF08 81 aa9.72□□□□□ -0.85
TRIM4-203ENST00000355947 DSCR8Q96T75 97 aa9.72□□□□□ -0.85
TRIM4-203ENST00000355947 TMEM89A2RUT3 159 aa9.71□□□□□ -0.85
TRIM4-203ENST00000355947 ESM1Q9NQ30 184 aa9.71□□□□□ -0.86
TRIM4-203ENST00000355947 TRAV13-2A0A0B4J235 113 aa9.71□□□□□ -0.86
TRIM4-203ENST00000355947 KIR2DL5BQ8NHK3 375 aa9.71□□□□□ -0.86
TRIM4-203ENST00000355947 APCP25054 2843 aa9.7□□□□□ -0.86
TRIM4-203ENST00000355947 IGLV10-54A0A075B6I4 117 aa9.7□□□□□ -0.86
TRIM4-203ENST00000355947 TIMM17BO60830 172 aa9.7□□□□□ -0.86
TRIM4-203ENST00000355947 LINC00846Q9NV44 126 aa9.7□□□□□ -0.86
TRIM4-203ENST00000355947 TRAV23DV6A0A075B6W5 121 aa9.7□□□□□ -0.86
TRIM4-203ENST00000355947 C11orf72Q8NBR9 251 aa9.7□□□□□ -0.86
TRIM4-203ENST00000355947 IGSF10Q6WRI0 2623 aa9.7□□□□□ -0.86
TRIM4-203ENST00000355947 TRACP01848 142 aa9.69□□□□□ -0.86
TRIM4-203ENST00000355947 IGLV4-60A0A075B6I1 120 aa9.69□□□□□ -0.86
TRIM4-203ENST00000355947 HILS1P60008 231 aa9.69□□□□□ -0.86
TRIM4-203ENST00000355947 CDC42SE2Q9NRR3 84 aa9.69□□□□□ -0.86
TRIM4-203ENST00000355947 CCL18P55774 89 aa9.69□□□□□ -0.86
TRIM4-203ENST00000355947 RNF152Q8N8N0 203 aa9.69□□□□□ -0.86
TRIM4-203ENST00000355947 LINC01356Q8N9X3 169 aa9.69□□□□□ -0.86
TRIM4-203ENST00000355947 CYSTM1Q9H1C7 97 aa9.69□□□□□ -0.86
TRIM4-203ENST00000355947 DNAJC30Q96LL9 226 aa9.68□□□□□ -0.86
TRIM4-203ENST00000355947 ZNF702PQ9H963 129 aa9.68□□□□□ -0.86
TRIM4-203ENST00000355947 CXCL5P42830 114 aa9.67□□□□□ -0.86
TRIM4-203ENST00000355947 IGLV5-39A0A0G2JS06 123 aa9.67□□□□□ -0.86
TRIM4-203ENST00000355947 COX7CP15954 63 aa9.67□□□□□ -0.86
TRIM4-203ENST00000355947 C1orf158Q8N1D5 194 aa9.67□□□□□ -0.86
TRIM4-203ENST00000355947 FAM19A5Q7Z5A7 132 aaPredicted RBP9.67□□□□□ -0.86
TRIM4-203ENST00000355947 ODF3L2Q3SX64 289 aa9.66□□□□□ -0.86
TRIM4-203ENST00000355947 DEFB114Q30KQ6 69 aa9.66□□□□□ -0.86
TRIM4-203ENST00000355947 IGKV2-28A0A075B6P5 120 aa9.66□□□□□ -0.86
TRIM4-203ENST00000355947 IGKV2D-28P01615 120 aa9.66□□□□□ -0.86
TRIM4-203ENST00000355947 WFDC11Q8NEX6 87 aa9.65□□□□□ -0.86
TRIM4-203ENST00000355947 LINC00526Q96FQ7 95 aa9.65□□□□□ -0.86
TRIM4-203ENST00000355947 ATOX1O00244 68 aa9.64□□□□□ -0.87
TRIM4-203ENST00000355947 DEFB121Q5J5C9 76 aa9.64□□□□□ -0.87
TRIM4-203ENST00000355947 J3KT08 172 aa9.64□□□□□ -0.87
TRIM4-203ENST00000355947 F8P00451 2351 aa9.64□□□□□ -0.87
TRIM4-203ENST00000355947 A8MTW9 85 aa9.63□□□□□ -0.87
TRIM4-203ENST00000355947 USP17L23D6RBM5 183 aa9.63□□□□□ -0.87
TRIM4-203ENST00000355947 LRRC75A-AS1Q8N1F1 130 aa9.63□□□□□ -0.87
TRIM4-203ENST00000355947 IMUPQ9GZP8 106 aa9.63□□□□□ -0.87
TRIM4-203ENST00000355947 F5H768 121 aa9.63□□□□□ -0.87
TRIM4-203ENST00000355947 IGLV5-45A0A087WSX0 123 aa9.63□□□□□ -0.87
TRIM4-203ENST00000355947 DEFB4AO15263 64 aa9.63□□□□□ -0.87
TRIM4-203ENST00000355947 CSDC2Q9Y534 153 aaKnown RBP9.63□□□□□ -0.87
TRIM4-203ENST00000355947 C9orf116Q5BN46 136 aaPredicted RBP9.62□□□□□ -0.87
TRIM4-203ENST00000355947 ENHOQ6UWT2 76 aa9.62□□□□□ -0.87
TRIM4-203ENST00000355947 ITPR3Q14573 2671 aa9.62□□□□□ -0.87
TRIM4-203ENST00000355947 HAMPP81172 84 aa9.62□□□□□ -0.87
TRIM4-203ENST00000355947 RPL18AQ02543 176 aaKnown RBP9.62□□□□□ -0.87
TRIM4-203ENST00000355947 FAM19A1Q7Z5A9 133 aa9.61□□□□□ -0.87
TRIM4-203ENST00000355947 ORMDL1Q9P0S3 153 aa9.61□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 93.1 ms