RNA–Protein interactions for RNA: ENST00000355572.6

PDLIM7-201, Transcript of PDZ and LIM domain 7, humanhuman

TSL 1 (best) BASIC

Gene PDLIM7, Length 977 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-201ENST00000355572 C20orf78Q9BR46 151 aa10.5□□□□□ -0.73
PDLIM7-201ENST00000355572 PPP1R17O96001 155 aa10.49□□□□□ -0.73
PDLIM7-201ENST00000355572 OXTP01178 125 aa10.49□□□□□ -0.73
PDLIM7-201ENST00000355572 S100A6P06703 90 aa10.49□□□□□ -0.73
PDLIM7-201ENST00000355572 DPH3Q96FX2 82 aa10.49□□□□□ -0.73
PDLIM7-201ENST00000355572 IGLV4-69A0A075B6H9 119 aa10.48□□□□□ -0.73
PDLIM7-201ENST00000355572 A0A1B0GW15 77 aa10.48□□□□□ -0.73
PDLIM7-201ENST00000355572 TRGC2P03986 189 aa10.48□□□□□ -0.73
PDLIM7-201ENST00000355572 Q6ZRU5 148 aa10.48□□□□□ -0.73
PDLIM7-201ENST00000355572 C5orf38Q86SI9 138 aa10.48□□□□□ -0.73
PDLIM7-201ENST00000355572 STPG4Q8N801 248 aa10.48□□□□□ -0.73
PDLIM7-201ENST00000355572 CARD19Q96LW7 228 aa10.48□□□□□ -0.73
PDLIM7-201ENST00000355572 GNB1LQ9BYB4 327 aa10.48□□□□□ -0.73
PDLIM7-201ENST00000355572 TIMM21Q9BVV7 248 aa10.47□□□□□ -0.73
PDLIM7-201ENST00000355572 C5orf52A6NGY3 159 aa10.46□□□□□ -0.73
PDLIM7-201ENST00000355572 HIST1H2BKO60814 126 aa10.46□□□□□ -0.73
PDLIM7-201ENST00000355572 HIST1H2BJP06899 126 aa10.46□□□□□ -0.73
PDLIM7-201ENST00000355572 HIST1H2BOP23527 126 aa10.46□□□□□ -0.73
PDLIM7-201ENST00000355572 HIST1H2BBP33778 126 aa10.46□□□□□ -0.73
PDLIM7-201ENST00000355572 HIST1H2BDP58876 126 aa10.46□□□□□ -0.73
PDLIM7-201ENST00000355572 HIST1H2BCP62807 126 aa10.46□□□□□ -0.73
PDLIM7-201ENST00000355572 SYCNQ0VAF6 134 aa10.46□□□□□ -0.73
PDLIM7-201ENST00000355572 HIST2H2BEQ16778 126 aa10.46□□□□□ -0.73
PDLIM7-201ENST00000355572 HIST2H2BFQ5QNW6 126 aaPredicted RBP10.46□□□□□ -0.73
PDLIM7-201ENST00000355572 HIST1H2BHQ93079 126 aa10.46□□□□□ -0.73
PDLIM7-201ENST00000355572 HIST1H2BNQ99877 126 aa10.46□□□□□ -0.73
PDLIM7-201ENST00000355572 HIST1H2BMQ99879 126 aa10.46□□□□□ -0.73
PDLIM7-201ENST00000355572 COX7A2LO14548 114 aa10.44□□□□□ -0.74
PDLIM7-201ENST00000355572 TMEM136Q6ZRR5 245 aa10.44□□□□□ -0.74
PDLIM7-201ENST00000355572 PRELID3AQ96N28 172 aa10.44□□□□□ -0.74
PDLIM7-201ENST00000355572 TRAPPC1Q9Y5R8 145 aa10.44□□□□□ -0.74
PDLIM7-201ENST00000355572 A0A0J9YXV3 536 aa10.43□□□□□ -0.74
PDLIM7-201ENST00000355572 ZNF561-AS1K7EIQ3 104 aa10.43□□□□□ -0.74
PDLIM7-201ENST00000355572 PRR3P79522 188 aaKnown RBP10.43□□□□□ -0.74
PDLIM7-201ENST00000355572 COA6Q5JTJ3 125 aaKnown RBP10.43□□□□□ -0.74
PDLIM7-201ENST00000355572 HMCN2Q8NDA2 5059 aa10.42□□□□□ -0.74
PDLIM7-201ENST00000355572 A0A1W2PNN7 141 aa10.42□□□□□ -0.74
PDLIM7-201ENST00000355572 S100A8P05109 93 aa10.42□□□□□ -0.74
PDLIM7-201ENST00000355572 MALP21145 153 aa10.42□□□□□ -0.74
PDLIM7-201ENST00000355572 ZC2HC1BQ5TFG8 222 aa10.42□□□□□ -0.74
PDLIM7-201ENST00000355572 ORMDL3Q8N138 153 aa10.42□□□□□ -0.74
PDLIM7-201ENST00000355572 IGHV3OR16-9A0A0B4J2B5 98 aa10.41□□□□□ -0.74
PDLIM7-201ENST00000355572 LOC389332A0A1B0GUA5 103 aa10.41□□□□□ -0.74
PDLIM7-201ENST00000355572 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP10.41□□□□□ -0.74
PDLIM7-201ENST00000355572 PTTG1IPP53801 180 aa10.41□□□□□ -0.74
PDLIM7-201ENST00000355572 MRPS36P82909 103 aaKnown RBP10.41□□□□□ -0.74
PDLIM7-201ENST00000355572 FABP9Q0Z7S8 132 aa10.41□□□□□ -0.74
PDLIM7-201ENST00000355572 ODF1Q14990 250 aa10.41□□□□□ -0.74
PDLIM7-201ENST00000355572 PPBPP02775 128 aa10.4□□□□□ -0.74
PDLIM7-201ENST00000355572 SNRPEP62304 92 aaKnown RBP10.4□□□□□ -0.74
PDLIM7-201ENST00000355572 GAGE2BQ13066 116 aa10.4□□□□□ -0.74
PDLIM7-201ENST00000355572 C10orf25Q5T742 122 aa10.4□□□□□ -0.74
PDLIM7-201ENST00000355572 TMEM18Q96B42 140 aa10.4□□□□□ -0.74
PDLIM7-201ENST00000355572 MRPL18Q9H0U6 180 aaKnown RBP10.4□□□□□ -0.74
PDLIM7-201ENST00000355572 SPANXA1Q9NS26 97 aa10.4□□□□□ -0.74
PDLIM7-201ENST00000355572 IGLV4-3A0A075B6K6 122 aa10.39□□□□□ -0.75
PDLIM7-201ENST00000355572 PRSS47A8MTI9 375 aa10.39□□□□□ -0.75
PDLIM7-201ENST00000355572 SPAG11BQ08648 103 aa10.39□□□□□ -0.75
PDLIM7-201ENST00000355572 CAMK2N2Q96S95 79 aa10.39□□□□□ -0.75
PDLIM7-201ENST00000355572 TNXBP22105 4242 aa10.38□□□□□ -0.75
PDLIM7-201ENST00000355572 LINC00173Q6ZV60 143 aa10.38□□□□□ -0.75
PDLIM7-201ENST00000355572 C7orf33Q8WU49 177 aa10.38□□□□□ -0.75
PDLIM7-201ENST00000355572 ORAOV1Q8WV07 137 aa10.38□□□□□ -0.75
PDLIM7-201ENST00000355572 C2orf48Q96LS8 159 aa10.38□□□□□ -0.75
PDLIM7-201ENST00000355572 LOC107984640A0A0U1RRK4 108 aa10.37□□□□□ -0.75
PDLIM7-201ENST00000355572 IFITM10A6NMD0 228 aa10.37□□□□□ -0.75
PDLIM7-201ENST00000355572 NDUFA6P56556 154 aa10.37□□□□□ -0.75
PDLIM7-201ENST00000355572 SMAGPQ0VAQ4 97 aa10.37□□□□□ -0.75
PDLIM7-201ENST00000355572 LINC00242Q5T6M2 205 aa10.36□□□□□ -0.75
PDLIM7-201ENST00000355572 APOMO95445 188 aa10.35□□□□□ -0.75
PDLIM7-201ENST00000355572 KIAA0087Q14695 138 aa10.35□□□□□ -0.75
PDLIM7-201ENST00000355572 UNQ6190/PRO20217Q6UXQ8 127 aa10.35□□□□□ -0.75
PDLIM7-201ENST00000355572 HIST3H2BBQ8N257 126 aa10.35□□□□□ -0.75
PDLIM7-201ENST00000355572 PYGO1Q9Y3Y4 419 aa10.35□□□□□ -0.75
PDLIM7-201ENST00000355572 RPL18AQ02543 176 aaKnown RBP10.34□□□□□ -0.75
PDLIM7-201ENST00000355572 KIAA1644Q3SXP7 199 aa10.34□□□□□ -0.75
PDLIM7-201ENST00000355572 C9orf116Q5BN46 136 aaPredicted RBP10.34□□□□□ -0.75
PDLIM7-201ENST00000355572 KRTAP11-1Q8IUC1 163 aa10.34□□□□□ -0.75
PDLIM7-201ENST00000355572 Q8N8P6 123 aa10.34□□□□□ -0.75
PDLIM7-201ENST00000355572 MAP1LC3AQ9H492 121 aa10.34□□□□□ -0.75
PDLIM7-201ENST00000355572 LINC00474Q9P2X8 69 aa10.34□□□□□ -0.75
PDLIM7-201ENST00000355572 C6orf48Q9UBA6 75 aa10.34□□□□□ -0.75
PDLIM7-201ENST00000355572 FAM168BA1KXE4 195 aa10.33□□□□□ -0.76
PDLIM7-201ENST00000355572 IFI27P40305 119 aaPredicted RBP10.33□□□□□ -0.76
PDLIM7-201ENST00000355572 SERTAD4-AS1Q5TG53 156 aa10.33□□□□□ -0.76
PDLIM7-201ENST00000355572 C2orf66Q6UXQ4 117 aa10.33□□□□□ -0.76
PDLIM7-201ENST00000355572 PHF5AQ7RTV0 110 aaKnown RBP10.33□□□□□ -0.76
PDLIM7-201ENST00000355572 KRTAP7-1Q8IUC3 87 aa10.33□□□□□ -0.76
PDLIM7-201ENST00000355572 OR10D4PQ8NGN7 298 aa10.33□□□□□ -0.76
PDLIM7-201ENST00000355572 SMIM6P0DI80 62 aa10.32□□□□□ -0.76
PDLIM7-201ENST00000355572 S100A2P29034 98 aa10.32□□□□□ -0.76
PDLIM7-201ENST00000355572 UBE2D1P51668 147 aa10.32□□□□□ -0.76
PDLIM7-201ENST00000355572 SRSF9Q13242 221 aaKnown RBP eCLIP10.32□□□□□ -0.76
PDLIM7-201ENST00000355572 TMEM141Q96I45 108 aa10.32□□□□□ -0.76
PDLIM7-201ENST00000355572 PACRGQ96M98 296 aaPredicted RBP10.32□□□□□ -0.76
PDLIM7-201ENST00000355572 MRPL35Q9NZE8 188 aaKnown RBP10.32□□□□□ -0.76
PDLIM7-201ENST00000355572 LAMTOR2Q9Y2Q5 125 aa10.32□□□□□ -0.76
PDLIM7-201ENST00000355572 A0A087WZ39 114 aa10.31□□□□□ -0.76
PDLIM7-201ENST00000355572 Q6ZRP5 223 aa10.31□□□□□ -0.76
PDLIM7-201ENST00000355572 AMELXQ99217 191 aa10.31□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms