RNA–Protein interactions for RNA: ENST00000355238.10

SYNCRIP-201, Transcript of synaptotagmin binding cytoplasmic RNA interacting protein, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SYNCRIP, Length 6,449 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNCRIP-201ENST00000355238 ATG2AQ2TAZ0 1938 aa9.27□□□□□ -0.93
SYNCRIP-201ENST00000355238 SHISA2Q6UWI4 295 aa9.27□□□□□ -0.93
SYNCRIP-201ENST00000355238 AMELXQ99217 191 aa9.27□□□□□ -0.93
SYNCRIP-201ENST00000355238 LRCOL1A6NCL2 159 aa9.27□□□□□ -0.93
SYNCRIP-201ENST00000355238 DNAJC9-AS1A6NH13 148 aa9.27□□□□□ -0.93
SYNCRIP-201ENST00000355238 C11orf45Q8TAV5 145 aa9.27□□□□□ -0.93
SYNCRIP-201ENST00000355238 RPS28P62857 69 aaKnown RBP9.26□□□□□ -0.93
SYNCRIP-201ENST00000355238 J3QKU1 62 aa9.26□□□□□ -0.93
SYNCRIP-201ENST00000355238 CRYGAP11844 174 aa9.26□□□□□ -0.93
SYNCRIP-201ENST00000355238 RETNQ9HD89 108 aa9.26□□□□□ -0.93
SYNCRIP-201ENST00000355238 A0A087WZ39 114 aa9.25□□□□□ -0.93
SYNCRIP-201ENST00000355238 Q8NA96 180 aa9.25□□□□□ -0.93
SYNCRIP-201ENST00000355238 C2orf16Q68DN1 1984 aa9.25□□□□□ -0.93
SYNCRIP-201ENST00000355238 TRBV10-3A0A0K0K1G6 114 aa9.25□□□□□ -0.93
SYNCRIP-201ENST00000355238 BBC3Q96PG8 261 aaPredicted RBP9.25□□□□□ -0.93
SYNCRIP-201ENST00000355238 TRBV7-6A0A0J9YX20 115 aa9.25□□□□□ -0.93
SYNCRIP-201ENST00000355238 TMEM254Q8TBM7 123 aa9.24□□□□□ -0.93
SYNCRIP-201ENST00000355238 LINC00208Q96KT6 92 aa9.24□□□□□ -0.93
SYNCRIP-201ENST00000355238 LELP1Q5T871 98 aa9.24□□□□□ -0.93
SYNCRIP-201ENST00000355238 CHCHD7Q9BUK0 85 aa9.24□□□□□ -0.93
SYNCRIP-201ENST00000355238 LINC00846Q9NV44 126 aa9.23□□□□□ -0.93
SYNCRIP-201ENST00000355238 LOC100131303A0A0U1RQF7 123 aa9.23□□□□□ -0.93
SYNCRIP-201ENST00000355238 EML5Q05BV3 1969 aa9.23□□□□□ -0.93
SYNCRIP-201ENST00000355238 PSPHP1O15172 72 aa9.22□□□□□ -0.93
SYNCRIP-201ENST00000355238 TANC2Q9HCD6 1990 aa9.22□□□□□ -0.93
SYNCRIP-201ENST00000355238 PRR14LQ5THK1 2151 aa9.22□□□□□ -0.93
SYNCRIP-201ENST00000355238 IGLV1-40P01703 118 aa9.21□□□□□ -0.93
SYNCRIP-201ENST00000355238 ESRGQ1W209 222 aa9.21□□□□□ -0.93
SYNCRIP-201ENST00000355238 COX6A2Q02221 97 aa9.21□□□□□ -0.93
SYNCRIP-201ENST00000355238 ZNF706Q9Y5V0 76 aaPredicted RBP9.21□□□□□ -0.93
SYNCRIP-201ENST00000355238 COL4A4P53420 1690 aaPredicted RBP9.21□□□□□ -0.94
SYNCRIP-201ENST00000355238 DEFB131BA0A096LNP1 70 aa9.21□□□□□ -0.94
SYNCRIP-201ENST00000355238 CYSRT1A8MQ03 144 aa9.21□□□□□ -0.94
SYNCRIP-201ENST00000355238 ZNF843Q8N446 348 aa9.21□□□□□ -0.94
SYNCRIP-201ENST00000355238 LINC01546A6NGU7 62 aa9.2□□□□□ -0.94
SYNCRIP-201ENST00000355238 C1orf137Q5JT78 98 aa9.2□□□□□ -0.94
SYNCRIP-201ENST00000355238 C11orf71Q6IPW1 123 aa9.2□□□□□ -0.94
SYNCRIP-201ENST00000355238 BCE1O60756 84 aa9.2□□□□□ -0.94
SYNCRIP-201ENST00000355238 Q6ZVQ6 151 aa9.2□□□□□ -0.94
SYNCRIP-201ENST00000355238 CXCL6P80162 114 aa9.19□□□□□ -0.94
SYNCRIP-201ENST00000355238 WNK1Q9H4A3 2382 aa9.19□□□□□ -0.94
SYNCRIP-201ENST00000355238 PRO0461Q9UI25 63 aa9.19□□□□□ -0.94
SYNCRIP-201ENST00000355238 ARHGAP32A7KAX9 2087 aa9.19□□□□□ -0.94
SYNCRIP-201ENST00000355238 ZNF580Q9UK33 172 aa9.18□□□□□ -0.94
SYNCRIP-201ENST00000355238 SMCPP49901 116 aaPredicted RBP9.18□□□□□ -0.94
SYNCRIP-201ENST00000355238 C10orf99Q6UWK7 81 aa9.18□□□□□ -0.94
SYNCRIP-201ENST00000355238 LINC01547P58512 204 aaPredicted RBP9.18□□□□□ -0.94
SYNCRIP-201ENST00000355238 EGFEM1PQ0D2K5 195 aa9.17□□□□□ -0.94
SYNCRIP-201ENST00000355238 NANOS2P60321 138 aaKnown RBP9.17□□□□□ -0.94
SYNCRIP-201ENST00000355238 ANKHD1Q8IWZ3 2542 aaKnown RBP9.17□□□□□ -0.94
SYNCRIP-201ENST00000355238 RPL37AP8A6NKH3 93 aa9.16□□□□□ -0.94
SYNCRIP-201ENST00000355238 IGHV4-31P0DP07 118 aa9.16□□□□□ -0.94
SYNCRIP-201ENST00000355238 HILS1P60008 231 aa9.16□□□□□ -0.94
SYNCRIP-201ENST00000355238 PRM2P04554 102 aa9.16□□□□□ -0.94
SYNCRIP-201ENST00000355238 UNQ6190/PRO20217Q6UXQ8 127 aa9.16□□□□□ -0.94
SYNCRIP-201ENST00000355238 LINC00575Q6W349 94 aa9.16□□□□□ -0.94
SYNCRIP-201ENST00000355238 ZNF702PQ9H963 129 aa9.16□□□□□ -0.94
SYNCRIP-201ENST00000355238 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP9.15□□□□□ -0.94
SYNCRIP-201ENST00000355238 hDV103S1A0JD37 113 aa9.15□□□□□ -0.94
SYNCRIP-201ENST00000355238 C10orf25Q5T742 122 aa9.14□□□□□ -0.95
SYNCRIP-201ENST00000355238 SPINK6Q6UWN8 80 aa9.14□□□□□ -0.95
SYNCRIP-201ENST00000355238 LIMD2Q9BT23 127 aa9.14□□□□□ -0.95
SYNCRIP-201ENST00000355238 SBSPONQ8IVN8 264 aa9.13□□□□□ -0.95
SYNCRIP-201ENST00000355238 PRR3P79522 188 aaKnown RBP9.13□□□□□ -0.95
SYNCRIP-201ENST00000355238 PTPRQQ9UMZ3 2332 aa9.12□□□□□ -0.95
SYNCRIP-201ENST00000355238 C4orf26Q17RF5 130 aa9.12□□□□□ -0.95
SYNCRIP-201ENST00000355238 IL17DQ8TAD2 202 aa9.12□□□□□ -0.95
SYNCRIP-201ENST00000355238 KPRPQ5T749 579 aaPredicted RBP9.12□□□□□ -0.95
SYNCRIP-201ENST00000355238 LINC01561Q8N1V8 128 aa9.12□□□□□ -0.95
SYNCRIP-201ENST00000355238 H0Y9P7 68 aa9.12□□□□□ -0.95
SYNCRIP-201ENST00000355238 C9orf116Q5BN46 136 aaPredicted RBP9.12□□□□□ -0.95
SYNCRIP-201ENST00000355238 LINC00482Q8N8I6 264 aa9.12□□□□□ -0.95
SYNCRIP-201ENST00000355238 IGHV4-30-4P0DP06 118 aa9.11□□□□□ -0.95
SYNCRIP-201ENST00000355238 IGLV4-60A0A075B6I1 120 aa9.11□□□□□ -0.95
SYNCRIP-201ENST00000355238 BEAN1Q3B7T3 259 aa9.1□□□□□ -0.95
SYNCRIP-201ENST00000355238 LINC00337Q8N6G1 96 aa9.1□□□□□ -0.95
SYNCRIP-201ENST00000355238 IGLV2-33A0A075B6J2 118 aaPredicted RBP9.1□□□□□ -0.95
SYNCRIP-201ENST00000355238 TRAV10A0A0B4J240 114 aa9.09□□□□□ -0.95
SYNCRIP-201ENST00000355238 HCG22E2RYF7 251 aa9.09□□□□□ -0.95
SYNCRIP-201ENST00000355238 LTBP2Q14767 1821 aa9.09□□□□□ -0.95
SYNCRIP-201ENST00000355238 BRI3O95415 125 aa9.09□□□□□ -0.95
SYNCRIP-201ENST00000355238 PLAC8L1A1L4L8 177 aa9.09□□□□□ -0.95
SYNCRIP-201ENST00000355238 C19orf84I3L1E1 186 aa9.09□□□□□ -0.95
SYNCRIP-201ENST00000355238 SORL1Q92673 2214 aa9.08□□□□□ -0.96
SYNCRIP-201ENST00000355238 NAV3Q8IVL0 2385 aa9.08□□□□□ -0.96
SYNCRIP-201ENST00000355238 IGLV9-49A0A0B4J1Y8 123 aa9.07□□□□□ -0.96
SYNCRIP-201ENST00000355238 IGLV5-39A0A0G2JS06 123 aa9.07□□□□□ -0.96
SYNCRIP-201ENST00000355238 F8WDY8 70 aa9.07□□□□□ -0.96
SYNCRIP-201ENST00000355238 LINC00474Q9P2X8 69 aa9.07□□□□□ -0.96
SYNCRIP-201ENST00000355238 REG3GQ6UW15 175 aa9.06□□□□□ -0.96
SYNCRIP-201ENST00000355238 KIF25-AS1Q9Y6Z4 181 aa9.06□□□□□ -0.96
SYNCRIP-201ENST00000355238 C18orf65Q6ZTR6 163 aa9.06□□□□□ -0.96
SYNCRIP-201ENST00000355238 C7orf33Q8WU49 177 aa9.06□□□□□ -0.96
SYNCRIP-201ENST00000355238 A0A1B0GUV1 79 aa9.06□□□□□ -0.96
SYNCRIP-201ENST00000355238 ODF3L2Q3SX64 289 aa9.06□□□□□ -0.96
SYNCRIP-201ENST00000355238 PCOTHQ58A44 107 aa9.06□□□□□ -0.96
SYNCRIP-201ENST00000355238 C2CD3Q4AC94 2353 aa9.05□□□□□ -0.96
SYNCRIP-201ENST00000355238 FAM208BQ5VWN6 2430 aa9.04□□□□□ -0.96
SYNCRIP-201ENST00000355238 FHL2Q14192 279 aa9.04□□□□□ -0.96
SYNCRIP-201ENST00000355238 MUC22E2RYF6 1773 aaPredicted RBP9.04□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 125.9 ms