RNA–Protein interactions for RNA: ENST00000348990.9

APP-202, Transcript of amyloid beta precursor protein, humanhuman

TSL 1 (best) BASIC

Gene APP, Length 3,355 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APP-202ENST00000348990 FLNCQ14315 2725 aa12.76□□□□□ -0.37
APP-202ENST00000348990 LRRK2Q5S007 2527 aa12.75□□□□□ -0.37
APP-202ENST00000348990 TRGV2A0A075B6R0 118 aa12.75□□□□□ -0.37
APP-202ENST00000348990 A0A1W2PRX2 142 aa12.75□□□□□ -0.37
APP-202ENST00000348990 hADV29S1A0JD25 119 aa12.75□□□□□ -0.37
APP-202ENST00000348990 SLPIP03973 132 aa12.75□□□□□ -0.37
APP-202ENST00000348990 CHD6Q8TD26 2715 aa12.75□□□□□ -0.37
APP-202ENST00000348990 LECT2O14960 151 aa12.74□□□□□ -0.37
APP-202ENST00000348990 CSMD2Q7Z408 3487 aa12.74□□□□□ -0.37
APP-202ENST00000348990 RNASE1P07998 156 aaKnown RBP12.74□□□□□ -0.37
APP-202ENST00000348990 NTM-AS1Q6ZSK4 140 aa12.74□□□□□ -0.37
APP-202ENST00000348990 LINC00337Q8N6G1 96 aa12.74□□□□□ -0.37
APP-202ENST00000348990 A0A087WYN8 130 aa12.73□□□□□ -0.37
APP-202ENST00000348990 A0A1B0GX51 115 aa12.73□□□□□ -0.37
APP-202ENST00000348990 NOP10Q9NPE3 64 aaKnown RBP12.73□□□□□ -0.37
APP-202ENST00000348990 K7EQD1 137 aa12.73□□□□□ -0.37
APP-202ENST00000348990 TMEM243Q9BU79 118 aa12.73□□□□□ -0.37
APP-202ENST00000348990 HIST1H4AP62805 103 aaKnown RBP12.73□□□□□ -0.37
APP-202ENST00000348990 Q96MF0 132 aa12.73□□□□□ -0.37
APP-202ENST00000348990 CDC42SE2Q9NRR3 84 aa12.73□□□□□ -0.37
APP-202ENST00000348990 C5orf38Q86SI9 138 aa12.72□□□□□ -0.37
APP-202ENST00000348990 A0A087WVE0 104 aa12.72□□□□□ -0.37
APP-202ENST00000348990 SMIM11BQ8TCY0 68 aa12.72□□□□□ -0.37
APP-202ENST00000348990 COX7B2Q8TF08 81 aa12.72□□□□□ -0.37
APP-202ENST00000348990 LINC00526Q96FQ7 95 aa12.72□□□□□ -0.37
APP-202ENST00000348990 NCR3O14931 201 aa12.71□□□□□ -0.37
APP-202ENST00000348990 COX7CP15954 63 aa12.71□□□□□ -0.37
APP-202ENST00000348990 LINC01356Q8N9X3 169 aa12.7□□□□□ -0.38
APP-202ENST00000348990 DOPEY1Q5JWR5 2465 aa12.7□□□□□ -0.38
APP-202ENST00000348990 BEAN1Q3B7T3 259 aa12.7□□□□□ -0.38
APP-202ENST00000348990 C9orf129Q5T035 196 aaKnown RBP12.7□□□□□ -0.38
APP-202ENST00000348990 LOC100131303A0A0U1RQF7 123 aa12.7□□□□□ -0.38
APP-202ENST00000348990 ZNF702PQ9H963 129 aa12.7□□□□□ -0.38
APP-202ENST00000348990 PKD1L2Q7Z442 2459 aa12.69□□□□□ -0.38
APP-202ENST00000348990 ATOX1O00244 68 aa12.69□□□□□ -0.38
APP-202ENST00000348990 UTP20O75691 2785 aaKnown RBP12.68□□□□□ -0.38
APP-202ENST00000348990 PRORYQ9H606 182 aa12.68□□□□□ -0.38
APP-202ENST00000348990 F5H768 121 aa12.68□□□□□ -0.38
APP-202ENST00000348990 RPL28P46779 137 aaKnown RBP12.68□□□□□ -0.38
APP-202ENST00000348990 ZFYVE26Q68DK2 2539 aa12.67□□□□□ -0.38
APP-202ENST00000348990 TRGV4A0A0C4DH28 118 aa12.67□□□□□ -0.38
APP-202ENST00000348990 FAM222AQ5U5X8 452 aa12.67□□□□□ -0.38
APP-202ENST00000348990 CXCL5P42830 114 aa12.67□□□□□ -0.38
APP-202ENST00000348990 DEFB114Q30KQ6 69 aa12.67□□□□□ -0.38
APP-202ENST00000348990 C22orf24Q9Y442 160 aa12.67□□□□□ -0.38
APP-202ENST00000348990 MXRA5Q9NR99 2828 aa12.66□□□□□ -0.38
APP-202ENST00000348990 C6orf226Q5I0X4 101 aa12.66□□□□□ -0.38
APP-202ENST00000348990 RNF152Q8N8N0 203 aa12.66□□□□□ -0.38
APP-202ENST00000348990 LINC00846Q9NV44 126 aa12.66□□□□□ -0.38
APP-202ENST00000348990 CCL18P55774 89 aa12.66□□□□□ -0.38
APP-202ENST00000348990 C1orf158Q8N1D5 194 aa12.66□□□□□ -0.38
APP-202ENST00000348990 IGKV2-28A0A075B6P5 120 aa12.66□□□□□ -0.38
APP-202ENST00000348990 J3KT08 172 aa12.66□□□□□ -0.38
APP-202ENST00000348990 IGKV2D-28P01615 120 aa12.66□□□□□ -0.38
APP-202ENST00000348990 PF4P02776 101 aa12.66□□□□□ -0.38
APP-202ENST00000348990 OVOL2Q9BRP0 275 aa12.65□□□□□ -0.38
APP-202ENST00000348990 RPL35AP18077 110 aaKnown RBP12.65□□□□□ -0.38
APP-202ENST00000348990 FBN2P35556 2912 aa12.64□□□□□ -0.39
APP-202ENST00000348990 TRBV10-1A0A0K0K1A3 114 aa12.64□□□□□ -0.39
APP-202ENST00000348990 ODF3L2Q3SX64 289 aa12.63□□□□□ -0.39
APP-202ENST00000348990 H0YGX0 51 aa12.63□□□□□ -0.39
APP-202ENST00000348990 RPL18AQ02543 176 aaKnown RBP12.63□□□□□ -0.39
APP-202ENST00000348990 CLPSL2Q6UWE3 100 aa12.62□□□□□ -0.39
APP-202ENST00000348990 LRRC75A-AS1Q8N1F1 130 aa12.62□□□□□ -0.39
APP-202ENST00000348990 CSDC2Q9Y534 153 aaKnown RBP12.62□□□□□ -0.39
APP-202ENST00000348990 TEX15Q9BXT5 2789 aa12.62□□□□□ -0.39
APP-202ENST00000348990 FAM19A5Q7Z5A7 132 aaPredicted RBP12.61□□□□□ -0.39
APP-202ENST00000348990 IGLV4-60A0A075B6I1 120 aa12.61□□□□□ -0.39
APP-202ENST00000348990 PLA2G2AP14555 144 aa12.61□□□□□ -0.39
APP-202ENST00000348990 WFDC9Q8NEX5 89 aa12.61□□□□□ -0.39
APP-202ENST00000348990 C5orf47Q569G3 176 aa12.61□□□□□ -0.39
APP-202ENST00000348990 XCL1P47992 114 aa12.6□□□□□ -0.39
APP-202ENST00000348990 MTORP42345 2549 aa12.59□□□□□ -0.39
APP-202ENST00000348990 CFAP46Q8IYW2 2715 aa12.59□□□□□ -0.39
APP-202ENST00000348990 Q6YL49 198 aa12.59□□□□□ -0.39
APP-202ENST00000348990 ORMDL1Q9P0S3 153 aa12.59□□□□□ -0.39
APP-202ENST00000348990 USP17L23D6RBM5 183 aa12.59□□□□□ -0.39
APP-202ENST00000348990 A8MTW9 85 aa12.58□□□□□ -0.39
APP-202ENST00000348990 CYSTM1Q9H1C7 97 aa12.58□□□□□ -0.4
APP-202ENST00000348990 KIR2DL5BQ8NHK3 375 aa12.58□□□□□ -0.4
APP-202ENST00000348990 WFDC10AQ9H1F0 79 aa12.58□□□□□ -0.4
APP-202ENST00000348990 PRR3P79522 188 aaKnown RBP12.57□□□□□ -0.4
APP-202ENST00000348990 DSCR8Q96T75 97 aa12.57□□□□□ -0.4
APP-202ENST00000348990 C2orf48Q96LS8 159 aa12.57□□□□□ -0.4
APP-202ENST00000348990 DEFB130BP0DP73 79 aa12.56□□□□□ -0.4
APP-202ENST00000348990 DEFB130AP0DP74 79 aa12.56□□□□□ -0.4
APP-202ENST00000348990 NF1P21359 2839 aa12.56□□□□□ -0.4
APP-202ENST00000348990 DSCR9P59020 149 aa12.56□□□□□ -0.4
APP-202ENST00000348990 TMEM86BQ8N661 226 aa12.56□□□□□ -0.4
APP-202ENST00000348990 CRYGAP11844 174 aa12.56□□□□□ -0.4
APP-202ENST00000348990 SERP2Q8N6R1 65 aa12.56□□□□□ -0.4
APP-202ENST00000348990 C4orf3Q8WVX3 66 aa12.56□□□□□ -0.4
APP-202ENST00000348990 TRAV23DV6A0A075B6W5 121 aa12.55□□□□□ -0.4
APP-202ENST00000348990 A0A096LPF7 62 aa12.55□□□□□ -0.4
APP-202ENST00000348990 HILS1P60008 231 aa12.55□□□□□ -0.4
APP-202ENST00000348990 Q6JHZ5 121 aa12.54□□□□□ -0.4
APP-202ENST00000348990 SMIM9A6NGZ8 99 aa12.54□□□□□ -0.4
APP-202ENST00000348990 IBA57-AS1B1ANH7 110 aa12.54□□□□□ -0.4
APP-202ENST00000348990 J3QLI3 93 aa12.54□□□□□ -0.4
APP-202ENST00000348990 PIEZO1Q92508 2521 aa12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms