RNA–Protein interactions for RNA: ENST00000344722.5

SMC4-201, Transcript of structural maintenance of chromosomes 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC4, Length 5,356 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-201ENST00000344722 LRP4O75096 1905 aa13.1□□□□□ -0.31
SMC4-201ENST00000344722 SOSTDC1Q6X4U4 206 aa13.1□□□□□ -0.31
SMC4-201ENST00000344722 PRYO14603 147 aa13.1□□□□□ -0.31
SMC4-201ENST00000344722 LINC00846Q9NV44 126 aa13.1□□□□□ -0.31
SMC4-201ENST00000344722 FAM30AQ9NZY2 134 aa13.1□□□□□ -0.31
SMC4-201ENST00000344722 SEC61GP60059 68 aa13.09□□□□□ -0.31
SMC4-201ENST00000344722 LOC100131303A0A0U1RQF7 123 aa13.09□□□□□ -0.31
SMC4-201ENST00000344722 NAV3Q8IVL0 2385 aa13.09□□□□□ -0.31
SMC4-201ENST00000344722 HIGD2AQ9BW72 106 aa13.08□□□□□ -0.31
SMC4-201ENST00000344722 PRO0628Q9UI54 55 aa13.08□□□□□ -0.31
SMC4-201ENST00000344722 PRR14LQ5THK1 2151 aa13.08□□□□□ -0.32
SMC4-201ENST00000344722 DNAJC9-AS1A6NH13 148 aa13.07□□□□□ -0.32
SMC4-201ENST00000344722 PRM2P04554 102 aa13.07□□□□□ -0.32
SMC4-201ENST00000344722 PRR4Q16378 134 aa13.07□□□□□ -0.32
SMC4-201ENST00000344722 Q8N3U1 123 aa13.07□□□□□ -0.32
SMC4-201ENST00000344722 A0A087WZ39 114 aa13.06□□□□□ -0.32
SMC4-201ENST00000344722 TRBV10-3A0A0K0K1G6 114 aa13.06□□□□□ -0.32
SMC4-201ENST00000344722 PRR15LQ9BU68 103 aa13.06□□□□□ -0.32
SMC4-201ENST00000344722 ARHGAP32A7KAX9 2087 aa13.05□□□□□ -0.32
SMC4-201ENST00000344722 BBC3Q96PG8 261 aaPredicted RBP13.05□□□□□ -0.32
SMC4-201ENST00000344722 FAM19A1Q7Z5A9 133 aa13.04□□□□□ -0.32
SMC4-201ENST00000344722 WFDC13Q8IUB5 93 aa13.04□□□□□ -0.32
SMC4-201ENST00000344722 SYCNQ0VAF6 134 aa13.04□□□□□ -0.32
SMC4-201ENST00000344722 ANKHD1Q8IWZ3 2542 aaKnown RBP13.04□□□□□ -0.32
SMC4-201ENST00000344722 KIF25-AS1Q9Y6Z4 181 aa13.03□□□□□ -0.32
SMC4-201ENST00000344722 PMAIP1Q13794 54 aa13.03□□□□□ -0.32
SMC4-201ENST00000344722 ZNF702PQ9H963 129 aa13.02□□□□□ -0.33
SMC4-201ENST00000344722 TRBV7-6A0A0J9YX20 115 aa13.01□□□□□ -0.33
SMC4-201ENST00000344722 CELA1Q9UNI1 258 aa13.01□□□□□ -0.33
SMC4-201ENST00000344722 BRI3O95415 125 aa13□□□□□ -0.33
SMC4-201ENST00000344722 IGKV2-28A0A075B6P5 120 aa13□□□□□ -0.33
SMC4-201ENST00000344722 IGKV2D-28P01615 120 aa13□□□□□ -0.33
SMC4-201ENST00000344722 TMEM254Q8TBM7 123 aa12.99□□□□□ -0.33
SMC4-201ENST00000344722 HILS1P60008 231 aa12.99□□□□□ -0.33
SMC4-201ENST00000344722 ZNF843Q8N446 348 aa12.99□□□□□ -0.33
SMC4-201ENST00000344722 LELP1Q5T871 98 aa12.98□□□□□ -0.33
SMC4-201ENST00000344722 C19orf84I3L1E1 186 aa12.98□□□□□ -0.33
SMC4-201ENST00000344722 IGKV2-24A0A0C4DH68 120 aa12.98□□□□□ -0.33
SMC4-201ENST00000344722 LRCOL1A6NCL2 159 aa12.98□□□□□ -0.33
SMC4-201ENST00000344722 Q6ZVQ6 151 aa12.98□□□□□ -0.33
SMC4-201ENST00000344722 IGHV4-31P0DP07 118 aa12.98□□□□□ -0.33
SMC4-201ENST00000344722 EDN2P20800 178 aa12.98□□□□□ -0.33
SMC4-201ENST00000344722 CYSRT1A8MQ03 144 aa12.98□□□□□ -0.33
SMC4-201ENST00000344722 LINC01547P58512 204 aaPredicted RBP12.97□□□□□ -0.33
SMC4-201ENST00000344722 C14orf177Q52M58 125 aa12.97□□□□□ -0.33
SMC4-201ENST00000344722 BCE1O60756 84 aa12.97□□□□□ -0.33
SMC4-201ENST00000344722 BEAN1Q3B7T3 259 aa12.96□□□□□ -0.33
SMC4-201ENST00000344722 LINC00337Q8N6G1 96 aa12.96□□□□□ -0.33
SMC4-201ENST00000344722 CXCL6P80162 114 aa12.96□□□□□ -0.34
SMC4-201ENST00000344722 CEP192Q8TEP8 1941 aa12.95□□□□□ -0.34
SMC4-201ENST00000344722 IGLV5-39A0A0G2JS06 123 aa12.95□□□□□ -0.34
SMC4-201ENST00000344722 PRR3P79522 188 aaKnown RBP12.94□□□□□ -0.34
SMC4-201ENST00000344722 IGLV4-60A0A075B6I1 120 aa12.93□□□□□ -0.34
SMC4-201ENST00000344722 Q8N9L7 120 aa12.93□□□□□ -0.34
SMC4-201ENST00000344722 A0A096LNI7 61 aa12.93□□□□□ -0.34
SMC4-201ENST00000344722 A0A0J9YWU9 116 aa12.93□□□□□ -0.34
SMC4-201ENST00000344722 C4orf26Q17RF5 130 aa12.93□□□□□ -0.34
SMC4-201ENST00000344722 CASC2Q6XLA1 102 aa12.93□□□□□ -0.34
SMC4-201ENST00000344722 Q6ZSN1 163 aa12.93□□□□□ -0.34
SMC4-201ENST00000344722 UNQ6190/PRO20217Q6UXQ8 127 aa12.93□□□□□ -0.34
SMC4-201ENST00000344722 ESRGQ1W209 222 aa12.92□□□□□ -0.34
SMC4-201ENST00000344722 LINC00575Q6W349 94 aa12.92□□□□□ -0.34
SMC4-201ENST00000344722 C18orf65Q6ZTR6 163 aa12.92□□□□□ -0.34
SMC4-201ENST00000344722 C11orf45Q8TAV5 145 aa12.92□□□□□ -0.34
SMC4-201ENST00000344722 WFDC10AQ9H1F0 79 aa12.92□□□□□ -0.34
SMC4-201ENST00000344722 LINC00315P59091 139 aa12.92□□□□□ -0.34
SMC4-201ENST00000344722 KIR2DL5BQ8NHK3 375 aa12.91□□□□□ -0.34
SMC4-201ENST00000344722 EXPH5Q8NEV8 1989 aa12.91□□□□□ -0.34
SMC4-201ENST00000344722 C9orf116Q5BN46 136 aaPredicted RBP12.9□□□□□ -0.34
SMC4-201ENST00000344722 AGRNO00468 2067 aa12.9□□□□□ -0.34
SMC4-201ENST00000344722 PSPHP1O15172 72 aa12.89□□□□□ -0.35
SMC4-201ENST00000344722 LINC00208Q96KT6 92 aa12.89□□□□□ -0.35
SMC4-201ENST00000344722 LINC01561Q8N1V8 128 aa12.89□□□□□ -0.35
SMC4-201ENST00000344722 C1orf137Q5JT78 98 aa12.89□□□□□ -0.35
SMC4-201ENST00000344722 EGFEM1PQ0D2K5 195 aa12.89□□□□□ -0.35
SMC4-201ENST00000344722 ODF3L2Q3SX64 289 aa12.88□□□□□ -0.35
SMC4-201ENST00000344722 J3QKU1 62 aa12.88□□□□□ -0.35
SMC4-201ENST00000344722 TET2Q6N021 2002 aaPredicted RBP12.88□□□□□ -0.35
SMC4-201ENST00000344722 Q8N2B8 174 aa12.88□□□□□ -0.35
SMC4-201ENST00000344722 DSCAMO60469 2012 aa12.87□□□□□ -0.35
SMC4-201ENST00000344722 FAM19A4Q96LR4 140 aa12.86□□□□□ -0.35
SMC4-201ENST00000344722 DEFB131BA0A096LNP1 70 aa12.85□□□□□ -0.35
SMC4-201ENST00000344722 LINC00482Q8N8I6 264 aa12.85□□□□□ -0.35
SMC4-201ENST00000344722 TECTAO75443 2155 aa12.85□□□□□ -0.35
SMC4-201ENST00000344722 RPL37AP8A6NKH3 93 aa12.85□□□□□ -0.35
SMC4-201ENST00000344722 C4orf48Q5BLP8 95 aa12.84□□□□□ -0.35
SMC4-201ENST00000344722 IGLV5-45A0A087WSX0 123 aa12.84□□□□□ -0.35
SMC4-201ENST00000344722 FHL2Q14192 279 aa12.83□□□□□ -0.36
SMC4-201ENST00000344722 A0A1B0GUV1 79 aa12.83□□□□□ -0.36
SMC4-201ENST00000344722 RETNQ9HD89 108 aa12.83□□□□□ -0.36
SMC4-201ENST00000344722 WNK1Q9H4A3 2382 aa12.83□□□□□ -0.36
SMC4-201ENST00000344722 K7ERS5 55 aa12.83□□□□□ -0.36
SMC4-201ENST00000344722 NANOS2P60321 138 aaKnown RBP12.83□□□□□ -0.36
SMC4-201ENST00000344722 FAM218AQ96MZ4 157 aa12.83□□□□□ -0.36
SMC4-201ENST00000344722 ADAMTS20P59510 1910 aa12.82□□□□□ -0.36
SMC4-201ENST00000344722 RAI1Q7Z5J4 1906 aaPredicted RBP12.81□□□□□ -0.36
SMC4-201ENST00000344722 PRRC2AP48634 2157 aaKnown RBP12.8□□□□□ -0.36
SMC4-201ENST00000344722 KPRPQ5T749 579 aaPredicted RBP12.79□□□□□ -0.36
SMC4-201ENST00000344722 FHL3Q13643 280 aa12.79□□□□□ -0.36
SMC4-201ENST00000344722 hDV103S1A0JD37 113 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 78.1 ms