RNA–Protein interactions for RNA: ENST00000342343.8

PDE8B-204, Transcript of phosphodiesterase 8B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PDE8B, Length 2,677 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE8B-204ENST00000342343 LINC01006Q8NI28 216 aa11.26□□□□□ -0.61
PDE8B-204ENST00000342343 DNAJC30Q96LL9 226 aa11.26□□□□□ -0.61
PDE8B-204ENST00000342343 COX7A2LO14548 114 aa11.26□□□□□ -0.61
PDE8B-204ENST00000342343 Q9H8V8 135 aa11.26□□□□□ -0.61
PDE8B-204ENST00000342343 NOTCH2Q04721 2471 aa11.26□□□□□ -0.61
PDE8B-204ENST00000342343 BEAN1Q3B7T3 259 aa11.25□□□□□ -0.61
PDE8B-204ENST00000342343 IGHV3-53P01767 116 aa11.25□□□□□ -0.61
PDE8B-204ENST00000342343 ZNF625Q96I27 306 aaPredicted RBP11.25□□□□□ -0.61
PDE8B-204ENST00000342343 IMUPQ9GZP8 106 aa11.25□□□□□ -0.61
PDE8B-204ENST00000342343 COX6A2Q02221 97 aa11.24□□□□□ -0.61
PDE8B-204ENST00000342343 COPS9Q8WXC6 57 aa11.24□□□□□ -0.61
PDE8B-204ENST00000342343 FAM110AQ9BQ89 295 aa11.24□□□□□ -0.61
PDE8B-204ENST00000342343 TRGV1A0A0A0MS02 117 aa11.24□□□□□ -0.61
PDE8B-204ENST00000342343 A0A0U1RRA0 63 aa11.24□□□□□ -0.61
PDE8B-204ENST00000342343 RS1O15537 224 aa11.24□□□□□ -0.61
PDE8B-204ENST00000342343 HERVK_113P63121 156 aa11.23□□□□□ -0.61
PDE8B-204ENST00000342343 IGLV5-39A0A0G2JS06 123 aa11.23□□□□□ -0.61
PDE8B-204ENST00000342343 SHISA2Q6UWI4 295 aa11.23□□□□□ -0.61
PDE8B-204ENST00000342343 HECTD1Q9ULT8 2610 aa11.23□□□□□ -0.61
PDE8B-204ENST00000342343 FN1P02751 2386 aaKnown RBP11.22□□□□□ -0.61
PDE8B-204ENST00000342343 Q6ZTI0 123 aa11.22□□□□□ -0.61
PDE8B-204ENST00000342343 TRAV25A0A0B4J276 109 aa11.22□□□□□ -0.61
PDE8B-204ENST00000342343 LINC00242Q5T6M2 205 aa11.22□□□□□ -0.61
PDE8B-204ENST00000342343 FAM236AA0A1B0GUQ0 79 aa11.21□□□□□ -0.61
PDE8B-204ENST00000342343 FAM236BA0A1B0GV22 79 aa11.21□□□□□ -0.61
PDE8B-204ENST00000342343 HERV-K104P63124 156 aa11.21□□□□□ -0.61
PDE8B-204ENST00000342343 SMR3AQ99954 134 aa11.21□□□□□ -0.62
PDE8B-204ENST00000342343 HIVEP2P31629 2446 aa11.2□□□□□ -0.62
PDE8B-204ENST00000342343 GIG44P09565 113 aaPredicted RBP11.2□□□□□ -0.62
PDE8B-204ENST00000342343 PLA2G2AP14555 144 aa11.2□□□□□ -0.62
PDE8B-204ENST00000342343 DAZ2Q13117 558 aaKnown RBP11.2□□□□□ -0.62
PDE8B-204ENST00000342343 DAZ4Q86SG3 579 aaKnown RBP11.2□□□□□ -0.62
PDE8B-204ENST00000342343 DAZ3Q9NR90 486 aaKnown RBP11.2□□□□□ -0.62
PDE8B-204ENST00000342343 SOSTDC1Q6X4U4 206 aa11.2□□□□□ -0.62
PDE8B-204ENST00000342343 LINC00643Q86TS7 51 aa11.2□□□□□ -0.62
PDE8B-204ENST00000342343 TMEM126AQ9H061 195 aa11.2□□□□□ -0.62
PDE8B-204ENST00000342343 TRACP01848 142 aa11.19□□□□□ -0.62
PDE8B-204ENST00000342343 BAALC-AS2P0C853 105 aa11.19□□□□□ -0.62
PDE8B-204ENST00000342343 RPL35AP18077 110 aaKnown RBP11.19□□□□□ -0.62
PDE8B-204ENST00000342343 IL17DQ8TAD2 202 aa11.19□□□□□ -0.62
PDE8B-204ENST00000342343 PRIMA1Q86XR5 153 aa11.19□□□□□ -0.62
PDE8B-204ENST00000342343 SMIM1B2RUZ4 78 aa11.18□□□□□ -0.62
PDE8B-204ENST00000342343 RNASE1P07998 156 aaKnown RBP11.18□□□□□ -0.62
PDE8B-204ENST00000342343 LINC00694P0DN24 101 aa11.18□□□□□ -0.62
PDE8B-204ENST00000342343 SMCR5Q8TEV8 140 aa11.18□□□□□ -0.62
PDE8B-204ENST00000342343 GCN1Q92616 2671 aaKnown RBP11.18□□□□□ -0.62
PDE8B-204ENST00000342343 NOP10Q9NPE3 64 aaKnown RBP11.18□□□□□ -0.62
PDE8B-204ENST00000342343 KMT2BQ9UMN6 2715 aaPredicted RBP11.18□□□□□ -0.62
PDE8B-204ENST00000342343 VWFP04275 2813 aa11.18□□□□□ -0.62
PDE8B-204ENST00000342343 NBEAL2Q6ZNJ1 2754 aa11.17□□□□□ -0.62
PDE8B-204ENST00000342343 NDUFA7O95182 113 aa11.17□□□□□ -0.62
PDE8B-204ENST00000342343 TRAV13-1A0A0B4J241 112 aa11.17□□□□□ -0.62
PDE8B-204ENST00000342343 C3orf56Q8N813 242 aa11.16□□□□□ -0.62
PDE8B-204ENST00000342343 FAM19A3Q7Z5A8 133 aa11.16□□□□□ -0.62
PDE8B-204ENST00000342343 NTM-AS1Q6ZSK4 140 aa11.15□□□□□ -0.62
PDE8B-204ENST00000342343 C16orf95Q9H693 158 aa11.15□□□□□ -0.62
PDE8B-204ENST00000342343 SDIM1Q6ZPB5 146 aa11.15□□□□□ -0.62
PDE8B-204ENST00000342343 C19orf73Q9NVV2 129 aa11.15□□□□□ -0.62
PDE8B-204ENST00000342343 CSDC2Q9Y534 153 aaKnown RBP11.15□□□□□ -0.62
PDE8B-204ENST00000342343 PLAC8L1A1L4L8 177 aa11.13□□□□□ -0.63
PDE8B-204ENST00000342343 IGLV1-51P01701 117 aa11.13□□□□□ -0.63
PDE8B-204ENST00000342343 FAM218AQ96MZ4 157 aa11.13□□□□□ -0.63
PDE8B-204ENST00000342343 INAFM2P0DMQ5 153 aa11.13□□□□□ -0.63
PDE8B-204ENST00000342343 FAM222AQ5U5X8 452 aa11.13□□□□□ -0.63
PDE8B-204ENST00000342343 OTOGQ6ZRI0 2925 aa11.13□□□□□ -0.63
PDE8B-204ENST00000342343 LOC100131303A0A0U1RQF7 123 aa11.12□□□□□ -0.63
PDE8B-204ENST00000342343 J3QKU1 62 aa11.12□□□□□ -0.63
PDE8B-204ENST00000342343 K7EQD1 137 aa11.12□□□□□ -0.63
PDE8B-204ENST00000342343 C22orf24Q9Y442 160 aa11.12□□□□□ -0.63
PDE8B-204ENST00000342343 C3orf22Q8N5N4 141 aa11.12□□□□□ -0.63
PDE8B-204ENST00000342343 F5H768 121 aa11.12□□□□□ -0.63
PDE8B-204ENST00000342343 ATP5G1P05496 136 aa11.12□□□□□ -0.63
PDE8B-204ENST00000342343 KRTAP10-3P60369 221 aa11.12□□□□□ -0.63
PDE8B-204ENST00000342343 RPL36AP83881 106 aaKnown RBP11.12□□□□□ -0.63
PDE8B-204ENST00000342343 RPL36ALQ969Q0 106 aaKnown RBP11.12□□□□□ -0.63
PDE8B-204ENST00000342343 TRAV13-2A0A0B4J235 113 aa11.11□□□□□ -0.63
PDE8B-204ENST00000342343 PF4P02776 101 aa11.11□□□□□ -0.63
PDE8B-204ENST00000342343 CXCL5P42830 114 aa11.11□□□□□ -0.63
PDE8B-204ENST00000342343 PPDPFQ9H3Y8 114 aa11.11□□□□□ -0.63
PDE8B-204ENST00000342343 CDC42SE2Q9NRR3 84 aa11.11□□□□□ -0.63
PDE8B-204ENST00000342343 C9orf153Q5TBE3 101 aa11.11□□□□□ -0.63
PDE8B-204ENST00000342343 UQCRQO14949 82 aa11.1□□□□□ -0.63
PDE8B-204ENST00000342343 HILS1P60008 231 aa11.1□□□□□ -0.63
PDE8B-204ENST00000342343 GAGE2AQ6NT46 116 aa11.1□□□□□ -0.63
PDE8B-204ENST00000342343 RPL28P46779 137 aaKnown RBP11.1□□□□□ -0.63
PDE8B-204ENST00000342343 C5orf38Q86SI9 138 aa11.1□□□□□ -0.63
PDE8B-204ENST00000342343 CSNK1G2-AS1Q8NCQ2 148 aa11.1□□□□□ -0.63
PDE8B-204ENST00000342343 Q9HAA7 133 aa11.1□□□□□ -0.63
PDE8B-204ENST00000342343 MALP21145 153 aa11.09□□□□□ -0.63
PDE8B-204ENST00000342343 TRGV2A0A075B6R0 118 aa11.09□□□□□ -0.63
PDE8B-204ENST00000342343 TRBV10-1A0A0K0K1A3 114 aa11.09□□□□□ -0.63
PDE8B-204ENST00000342343 TENM1Q9UKZ4 2725 aa11.09□□□□□ -0.63
PDE8B-204ENST00000342343 CRPP02741 224 aa11.07□□□□□ -0.64
PDE8B-204ENST00000342343 LINC00526Q96FQ7 95 aa11.07□□□□□ -0.64
PDE8B-204ENST00000342343 CFAP161Q6P656 301 aa11.06□□□□□ -0.64
PDE8B-204ENST00000342343 SPATA3Q8NHX4 192 aa11.06□□□□□ -0.64
PDE8B-204ENST00000342343 C16orf74Q96GX8 76 aa11.06□□□□□ -0.64
PDE8B-204ENST00000342343 DNAL4O96015 105 aa11.05□□□□□ -0.64
PDE8B-204ENST00000342343 OVOL2Q9BRP0 275 aa11.05□□□□□ -0.64
PDE8B-204ENST00000342343 UBE2L6O14933 153 aa11.05□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 62.8 ms