RNA–Protein interactions for RNA: ENST00000340398.4

H3F3C-201, Transcript of H3 histone family member 3C, humanhuman

APPRIS P1 BASIC

Gene H3F3C, Length 1,057 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3C-201ENST00000340398 IGHV3OR16-9A0A0B4J2B5 98 aa9.91□□□□□ -0.82
H3F3C-201ENST00000340398 RPL23P62829 140 aaKnown RBP9.91□□□□□ -0.82
H3F3C-201ENST00000340398 TMEM241Q24JQ0 296 aa9.91□□□□□ -0.82
H3F3C-201ENST00000340398 AKAP14Q86UN6 197 aa9.91□□□□□ -0.82
H3F3C-201ENST00000340398 OR10D4PQ8NGN7 298 aa9.91□□□□□ -0.82
H3F3C-201ENST00000340398 MRPL35Q9NZE8 188 aaKnown RBP9.91□□□□□ -0.82
H3F3C-201ENST00000340398 TRBV24-1A0A075B6N3 115 aa9.9□□□□□ -0.82
H3F3C-201ENST00000340398 CKS2P33552 79 aa9.9□□□□□ -0.82
H3F3C-201ENST00000340398 FAM74A3Q4VXF1 159 aa9.9□□□□□ -0.82
H3F3C-201ENST00000340398 C20orf78Q9BR46 151 aa9.9□□□□□ -0.82
H3F3C-201ENST00000340398 C9JQL5 133 aa9.89□□□□□ -0.83
H3F3C-201ENST00000340398 TNFRSF6BO95407 300 aa9.89□□□□□ -0.83
H3F3C-201ENST00000340398 GAGE2EQ4V326 116 aa9.89□□□□□ -0.83
H3F3C-201ENST00000340398 KRTAP7-1Q8IUC3 87 aa9.89□□□□□ -0.83
H3F3C-201ENST00000340398 DIRC1Q969H9 104 aa9.89□□□□□ -0.83
H3F3C-201ENST00000340398 IMMP2LQ96T52 175 aa9.89□□□□□ -0.83
H3F3C-201ENST00000340398 C6orf48Q9UBA6 75 aa9.89□□□□□ -0.83
H3F3C-201ENST00000340398 GAGE2DQ9UEU5 116 aa9.89□□□□□ -0.83
H3F3C-201ENST00000340398 SMIM27A0A1W2PRY6 76 aa9.88□□□□□ -0.83
H3F3C-201ENST00000340398 LINC00862A6NCI5 91 aa9.88□□□□□ -0.83
H3F3C-201ENST00000340398 TCAPO15273 167 aa9.88□□□□□ -0.83
H3F3C-201ENST00000340398 ADIRFQ15847 76 aa9.88□□□□□ -0.83
H3F3C-201ENST00000340398 FAM19A5Q7Z5A7 132 aaPredicted RBP9.88□□□□□ -0.83
H3F3C-201ENST00000340398 NDUFA1O15239 70 aa9.87□□□□□ -0.83
H3F3C-201ENST00000340398 RPL32P62910 135 aaKnown RBP9.87□□□□□ -0.83
H3F3C-201ENST00000340398 IFITM10A6NMD0 228 aa9.86□□□□□ -0.83
H3F3C-201ENST00000340398 D6R8Y8 96 aa9.86□□□□□ -0.83
H3F3C-201ENST00000340398 H0Y9J4 135 aa9.86□□□□□ -0.83
H3F3C-201ENST00000340398 NPYP01303 97 aa9.86□□□□□ -0.83
H3F3C-201ENST00000340398 TLX1NBP0CAT3 122 aa9.86□□□□□ -0.83
H3F3C-201ENST00000340398 MRPS36P82909 103 aaKnown RBP9.86□□□□□ -0.83
H3F3C-201ENST00000340398 SMIM2Q9BVW6 85 aa9.86□□□□□ -0.83
H3F3C-201ENST00000340398 SPANXA1Q9NS26 97 aa9.86□□□□□ -0.83
H3F3C-201ENST00000340398 F8WDY8 70 aa9.85□□□□□ -0.83
H3F3C-201ENST00000340398 HBBP68871 147 aa9.85□□□□□ -0.83
H3F3C-201ENST00000340398 SRSF3P84103 164 aaKnown RBP9.85□□□□□ -0.83
H3F3C-201ENST00000340398 KIAA0087Q14695 138 aa9.85□□□□□ -0.83
H3F3C-201ENST00000340398 MRPL54Q6P161 138 aaKnown RBP9.85□□□□□ -0.83
H3F3C-201ENST00000340398 NAT8Q9UHE5 227 aa9.84□□□□□ -0.83
H3F3C-201ENST00000340398 KRTAP1-4P0C5Y4 121 aa9.83□□□□□ -0.84
H3F3C-201ENST00000340398 SMDT1Q9H4I9 107 aa9.83□□□□□ -0.84
H3F3C-201ENST00000340398 A0A1B0GW15 77 aa9.82□□□□□ -0.84
H3F3C-201ENST00000340398 LINC00242Q5T6M2 205 aa9.82□□□□□ -0.84
H3F3C-201ENST00000340398 C2orf82Q6UX34 121 aa9.82□□□□□ -0.84
H3F3C-201ENST00000340398 M0QXV9 152 aa9.81□□□□□ -0.84
H3F3C-201ENST00000340398 TGIF2-C20orf24A0A0A6YYL0 155 aa9.8□□□□□ -0.84
H3F3C-201ENST00000340398 A0A1B0GXF2 115 aa9.8□□□□□ -0.84
H3F3C-201ENST00000340398 UBE2BP63146 152 aa9.8□□□□□ -0.84
H3F3C-201ENST00000340398 C9orf129Q5T035 196 aaKnown RBP9.8□□□□□ -0.84
H3F3C-201ENST00000340398 ZC2HC1BQ5TFG8 222 aa9.8□□□□□ -0.84
H3F3C-201ENST00000340398 IGLV1-50A0A075B6I6 118 aa9.79□□□□□ -0.84
H3F3C-201ENST00000340398 IGLV4-3A0A075B6K6 122 aa9.79□□□□□ -0.84
H3F3C-201ENST00000340398 F8W036 122 aa9.79□□□□□ -0.84
H3F3C-201ENST00000340398 TMEM136Q6ZRR5 245 aa9.79□□□□□ -0.84
H3F3C-201ENST00000340398 RAB5AP20339 215 aa9.78□□□□□ -0.84
H3F3C-201ENST00000340398 IFI27P40305 119 aaPredicted RBP9.78□□□□□ -0.84
H3F3C-201ENST00000340398 SMCPP49901 116 aaPredicted RBP9.78□□□□□ -0.84
H3F3C-201ENST00000340398 PYGO1Q9Y3Y4 419 aa9.78□□□□□ -0.84
H3F3C-201ENST00000340398 TRBV30A0A0K0K1B3 111 aa9.77□□□□□ -0.85
H3F3C-201ENST00000340398 LOC389332A0A1B0GUA5 103 aa9.77□□□□□ -0.85
H3F3C-201ENST00000340398 NDUFC2-KCTD14E9PQ53 114 aa9.77□□□□□ -0.85
H3F3C-201ENST00000340398 PPBPP02775 128 aa9.77□□□□□ -0.85
H3F3C-201ENST00000340398 PEA15Q15121 130 aa9.77□□□□□ -0.85
H3F3C-201ENST00000340398 PRR4Q16378 134 aa9.77□□□□□ -0.85
H3F3C-201ENST00000340398 PRELID3AQ96N28 172 aa9.77□□□□□ -0.85
H3F3C-201ENST00000340398 S100A8P05109 93 aa9.76□□□□□ -0.85
H3F3C-201ENST00000340398 UBE2D1P51668 147 aa9.76□□□□□ -0.85
H3F3C-201ENST00000340398 ORMDL3Q8N138 153 aa9.76□□□□□ -0.85
H3F3C-201ENST00000340398 TMEM141Q96I45 108 aa9.76□□□□□ -0.85
H3F3C-201ENST00000340398 PACRGQ96M98 296 aaPredicted RBP9.76□□□□□ -0.85
H3F3C-201ENST00000340398 MUC2Q02817 5179 aa9.75□□□□□ -0.85
H3F3C-201ENST00000340398 LINC00469Q8N7U9 141 aa9.75□□□□□ -0.85
H3F3C-201ENST00000340398 TEX43Q6ZNM6 134 aa9.73□□□□□ -0.85
H3F3C-201ENST00000340398 TOMM7Q9P0U1 55 aa9.73□□□□□ -0.85
H3F3C-201ENST00000340398 ZNF861PO60384 105 aa9.72□□□□□ -0.85
H3F3C-201ENST00000340398 LINC00173Q6ZV60 143 aa9.72□□□□□ -0.85
H3F3C-201ENST00000340398 C22orf24Q9Y442 160 aa9.72□□□□□ -0.85
H3F3C-201ENST00000340398 PRSS47A8MTI9 375 aa9.71□□□□□ -0.86
H3F3C-201ENST00000340398 TSPAN13O95857 204 aa9.71□□□□□ -0.86
H3F3C-201ENST00000340398 LINC01561Q8N1V8 128 aa9.71□□□□□ -0.86
H3F3C-201ENST00000340398 XAGE1AQ9HD64 81 aa9.71□□□□□ -0.86
H3F3C-201ENST00000340398 PRSS2P07478 247 aa9.7□□□□□ -0.86
H3F3C-201ENST00000340398 RPL13AP40429 203 aaKnown RBP9.7□□□□□ -0.86
H3F3C-201ENST00000340398 NDUFA5Q16718 116 aa9.7□□□□□ -0.86
H3F3C-201ENST00000340398 C6orf226Q5I0X4 101 aa9.7□□□□□ -0.86
H3F3C-201ENST00000340398 C2orf66Q6UXQ4 117 aa9.7□□□□□ -0.86
H3F3C-201ENST00000340398 Q6ZN92 141 aa9.7□□□□□ -0.86
H3F3C-201ENST00000340398 AMELXQ99217 191 aa9.7□□□□□ -0.86
H3F3C-201ENST00000340398 VCX2Q9H322 139 aa9.7□□□□□ -0.86
H3F3C-201ENST00000340398 CKS1BP61024 79 aa9.69□□□□□ -0.86
H3F3C-201ENST00000340398 ATP5L2Q7Z4Y8 100 aa9.69□□□□□ -0.86
H3F3C-201ENST00000340398 Q8N8P6 123 aa9.69□□□□□ -0.86
H3F3C-201ENST00000340398 C2orf88Q9BSF0 95 aa9.69□□□□□ -0.86
H3F3C-201ENST00000340398 MAP1LC3AQ9H492 121 aa9.69□□□□□ -0.86
H3F3C-201ENST00000340398 CYSLTR1Q9Y271 337 aa9.69□□□□□ -0.86
H3F3C-201ENST00000340398 CARHSP1Q9Y2V2 147 aaKnown RBP9.69□□□□□ -0.86
H3F3C-201ENST00000340398 ALKBH7Q9BT30 221 aaPredicted RBP9.68□□□□□ -0.86
H3F3C-201ENST00000340398 CTDSP1Q9GZU7 261 aa9.68□□□□□ -0.86
H3F3C-201ENST00000340398 IGIPA6NJ69 53 aa9.67□□□□□ -0.86
H3F3C-201ENST00000340398 Q8IZM0 81 aa9.66□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 73.3 ms