RNA–Protein interactions for RNA: ENST00000338602.6

SLC28A1-202, Transcript of solute carrier family 28 member 1, humanhuman

TSL 1 (best) BASIC

Gene SLC28A1, Length 1,360 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A1-202ENST00000338602 LINC00310P59036 64 aa7.36□□□□□ -1.23
SLC28A1-202ENST00000338602 CNBPP62633 177 aaKnown RBP7.36□□□□□ -1.23
SLC28A1-202ENST00000338602 MRPS36P82909 103 aaKnown RBP7.36□□□□□ -1.23
SLC28A1-202ENST00000338602 LINC01620Q4KN68 170 aa7.36□□□□□ -1.23
SLC28A1-202ENST00000338602 Q6ZUT4 128 aa7.36□□□□□ -1.23
SLC28A1-202ENST00000338602 C9orf163Q8N9P6 203 aa7.36□□□□□ -1.23
SLC28A1-202ENST00000338602 CYSLTR1Q9Y271 337 aa7.36□□□□□ -1.23
SLC28A1-202ENST00000338602 EPM2AB3EWF7 344 aa7.35□□□□□ -1.23
SLC28A1-202ENST00000338602 FAM229AH3BQW9 127 aa7.35□□□□□ -1.23
SLC28A1-202ENST00000338602 RNASE13Q5GAN3 156 aaKnown RBP7.35□□□□□ -1.23
SLC28A1-202ENST00000338602 Q6ZSA8 131 aa7.35□□□□□ -1.23
SLC28A1-202ENST00000338602 URB1-AS1Q96HZ7 61 aa7.35□□□□□ -1.23
SLC28A1-202ENST00000338602 PYGO1Q9Y3Y4 419 aa7.35□□□□□ -1.23
SLC28A1-202ENST00000338602 IGHV3-64A0A075B6Q5 118 aa7.34□□□□□ -1.23
SLC28A1-202ENST00000338602 GVQW2A0A096LPI5 108 aaPredicted RBP7.34□□□□□ -1.23
SLC28A1-202ENST00000338602 IFITM10A6NMD0 228 aa7.34□□□□□ -1.23
SLC28A1-202ENST00000338602 COX7A2LO14548 114 aa7.34□□□□□ -1.23
SLC28A1-202ENST00000338602 Q6ZN92 141 aa7.34□□□□□ -1.23
SLC28A1-202ENST00000338602 C15orf56Q8N910 161 aa7.34□□□□□ -1.23
SLC28A1-202ENST00000338602 PRSS3P2Q8NHM4 247 aa7.34□□□□□ -1.23
SLC28A1-202ENST00000338602 FAM30AQ9NZY2 134 aa7.34□□□□□ -1.23
SLC28A1-202ENST00000338602 ZNF561-AS1K7EIQ3 104 aa7.33□□□□□ -1.24
SLC28A1-202ENST00000338602 APOMO95445 188 aa7.33□□□□□ -1.24
SLC28A1-202ENST00000338602 HIGD2BQ4VC39 106 aa7.33□□□□□ -1.24
SLC28A1-202ENST00000338602 PAPPA-AS1Q5QFB9 102 aa7.33□□□□□ -1.24
SLC28A1-202ENST00000338602 C2orf66Q6UXQ4 117 aa7.33□□□□□ -1.24
SLC28A1-202ENST00000338602 TMEM141Q96I45 108 aa7.33□□□□□ -1.24
SLC28A1-202ENST00000338602 PKIGQ9Y2B9 76 aa7.33□□□□□ -1.24
SLC28A1-202ENST00000338602 LINC01549A6NIU2 74 aa7.33□□□□□ -1.24
SLC28A1-202ENST00000338602 SMR3BP02814 79 aaPredicted RBP7.33□□□□□ -1.24
SLC28A1-202ENST00000338602 NPSP0C0P6 89 aa7.33□□□□□ -1.24
SLC28A1-202ENST00000338602 LINC00614P0C842 121 aa7.33□□□□□ -1.24
SLC28A1-202ENST00000338602 S100A2P29034 98 aa7.33□□□□□ -1.24
SLC28A1-202ENST00000338602 HAMPP81172 84 aa7.33□□□□□ -1.24
SLC28A1-202ENST00000338602 TEX43Q6ZNM6 134 aa7.33□□□□□ -1.24
SLC28A1-202ENST00000338602 C2orf88Q9BSF0 95 aa7.33□□□□□ -1.24
SLC28A1-202ENST00000338602 CHAC1Q9BUX1 264 aa7.33□□□□□ -1.24
SLC28A1-202ENST00000338602 FABP4P15090 132 aa7.32□□□□□ -1.24
SLC28A1-202ENST00000338602 FAM19A2Q8N3H0 131 aa7.32□□□□□ -1.24
SLC28A1-202ENST00000338602 DPH3Q96FX2 82 aa7.32□□□□□ -1.24
SLC28A1-202ENST00000338602 HIST1H2BLQ99880 126 aa7.32□□□□□ -1.24
SLC28A1-202ENST00000338602 OPRPNQ99935 248 aaPredicted RBP7.32□□□□□ -1.24
SLC28A1-202ENST00000338602 VCX2Q9H322 139 aa7.32□□□□□ -1.24
SLC28A1-202ENST00000338602 IGLV4-3A0A075B6K6 122 aa7.31□□□□□ -1.24
SLC28A1-202ENST00000338602 AKR1D1P51857 326 aa7.31□□□□□ -1.24
SLC28A1-202ENST00000338602 SDIM1Q6ZPB5 146 aa7.31□□□□□ -1.24
SLC28A1-202ENST00000338602 FA2HQ7L5A8 372 aa7.31□□□□□ -1.24
SLC28A1-202ENST00000338602 SCXQ7RTU7 201 aa7.31□□□□□ -1.24
SLC28A1-202ENST00000338602 C5orf38Q86SI9 138 aa7.31□□□□□ -1.24
SLC28A1-202ENST00000338602 CHCHD1Q96BP2 118 aaKnown RBP7.31□□□□□ -1.24
SLC28A1-202ENST00000338602 HSBP1O75506 76 aa7.3□□□□□ -1.24
SLC28A1-202ENST00000338602 PMCHL1Q16048 86 aa7.3□□□□□ -1.24
SLC28A1-202ENST00000338602 Q5VSD8 79 aa7.3□□□□□ -1.24
SLC28A1-202ENST00000338602 SLPIP03973 132 aa7.29□□□□□ -1.24
SLC28A1-202ENST00000338602 SYCNQ0VAF6 134 aa7.29□□□□□ -1.24
SLC28A1-202ENST00000338602 OR10D4PQ8NGN7 298 aa7.29□□□□□ -1.24
SLC28A1-202ENST00000338602 TOMM6Q96B49 74 aa7.29□□□□□ -1.24
SLC28A1-202ENST00000338602 CARD19Q96LW7 228 aa7.29□□□□□ -1.24
SLC28A1-202ENST00000338602 TIMM17AQ99595 171 aa7.29□□□□□ -1.24
SLC28A1-202ENST00000338602 LINC01546A6NGU7 62 aa7.28□□□□□ -1.24
SLC28A1-202ENST00000338602 PLA2G1BP04054 148 aaKnown RBP7.28□□□□□ -1.24
SLC28A1-202ENST00000338602 SEC11AP67812 179 aa7.28□□□□□ -1.24
SLC28A1-202ENST00000338602 ERASQ7Z444 233 aa7.28□□□□□ -1.24
SLC28A1-202ENST00000338602 CIRBP-AS1Q8TBR5 109 aa7.28□□□□□ -1.24
SLC28A1-202ENST00000338602 FAM104AQ969W3 186 aa7.28□□□□□ -1.24
SLC28A1-202ENST00000338602 SCGB3A1Q96QR1 104 aa7.28□□□□□ -1.24
SLC28A1-202ENST00000338602 IGLV4-69A0A075B6H9 119 aa7.27□□□□□ -1.25
SLC28A1-202ENST00000338602 IGHV3OR16-9A0A0B4J2B5 98 aa7.27□□□□□ -1.25
SLC28A1-202ENST00000338602 IGIPA6NJ69 53 aa7.27□□□□□ -1.25
SLC28A1-202ENST00000338602 SPAG11BQ08648 103 aa7.27□□□□□ -1.25
SLC28A1-202ENST00000338602 LINC00528Q8N1L1 170 aa7.27□□□□□ -1.25
SLC28A1-202ENST00000338602 C2orf48Q96LS8 159 aa7.27□□□□□ -1.25
SLC28A1-202ENST00000338602 PACRGQ96M98 296 aaPredicted RBP7.27□□□□□ -1.25
SLC28A1-202ENST00000338602 CAMK2N2Q96S95 79 aa7.27□□□□□ -1.25
SLC28A1-202ENST00000338602 AMELXQ99217 191 aa7.27□□□□□ -1.25
SLC28A1-202ENST00000338602 FAT1Q14517 4588 aa7.27□□□□□ -1.25
SLC28A1-202ENST00000338602 F8WDY8 70 aa7.26□□□□□ -1.25
SLC28A1-202ENST00000338602 UBE2D1P51668 147 aa7.26□□□□□ -1.25
SLC28A1-202ENST00000338602 COX6A2Q02221 97 aa7.26□□□□□ -1.25
SLC28A1-202ENST00000338602 LINC00242Q5T6M2 205 aa7.26□□□□□ -1.25
SLC28A1-202ENST00000338602 ORAOV1Q8WV07 137 aa7.26□□□□□ -1.25
SLC28A1-202ENST00000338602 LINC00526Q96FQ7 95 aa7.26□□□□□ -1.25
SLC28A1-202ENST00000338602 LINC00474Q9P2X8 69 aa7.26□□□□□ -1.25
SLC28A1-202ENST00000338602 SRRM2Q9UQ35 2752 aaKnown RBP7.26□□□□□ -1.25
SLC28A1-202ENST00000338602 A0A087WZ39 114 aa7.25□□□□□ -1.25
SLC28A1-202ENST00000338602 A0A096LNJ9 63 aa7.25□□□□□ -1.25
SLC28A1-202ENST00000338602 INAFM2P0DMQ5 153 aa7.25□□□□□ -1.25
SLC28A1-202ENST00000338602 LINC00173Q6ZV60 143 aa7.25□□□□□ -1.25
SLC28A1-202ENST00000338602 LINC01561Q8N1V8 128 aa7.25□□□□□ -1.25
SLC28A1-202ENST00000338602 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7.25□□□□□ -1.25
SLC28A1-202ENST00000338602 HERVK_113P63121 156 aa7.24□□□□□ -1.25
SLC28A1-202ENST00000338602 CIRBPQ14011 172 aaKnown RBP7.24□□□□□ -1.25
SLC28A1-202ENST00000338602 GEMIN7Q9H840 131 aaKnown RBP7.24□□□□□ -1.25
SLC28A1-202ENST00000338602 IGKV2-24A0A0C4DH68 120 aa7.23□□□□□ -1.25
SLC28A1-202ENST00000338602 LOC107984640A0A0U1RRK4 108 aa7.23□□□□□ -1.25
SLC28A1-202ENST00000338602 MAJINQ3KP22 176 aa7.23□□□□□ -1.25
SLC28A1-202ENST00000338602 ZC2HC1BQ5TFG8 222 aa7.23□□□□□ -1.25
SLC28A1-202ENST00000338602 SPACA4Q8TDM5 124 aa7.23□□□□□ -1.25
SLC28A1-202ENST00000338602 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP7.22□□□□□ -1.25
SLC28A1-202ENST00000338602 NDUFA1O15239 70 aa7.22□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 78.9 ms