RNA–Protein interactions for RNA: ENST00000336873.9

HPS4-201, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

APPRIS P1 TSL 5 BASIC

Gene HPS4, Length 3,786 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-201ENST00000336873 ADAMTSL4-AS1Q5T5F5 129 aa6□□□□□ -1.45
HPS4-201ENST00000336873 COX8CQ7Z4L0 72 aa6□□□□□ -1.45
HPS4-201ENST00000336873 TMEM243Q9BU79 118 aa6□□□□□ -1.45
HPS4-201ENST00000336873 RBMY1BA6NDE4 496 aaKnown RBP6□□□□□ -1.45
HPS4-201ENST00000336873 RBMY1EA6NEQ0 496 aaKnown RBP6□□□□□ -1.45
HPS4-201ENST00000336873 RBMY1DP0C7P1 496 aaKnown RBP6□□□□□ -1.45
HPS4-201ENST00000336873 LINC00315P59091 139 aa6□□□□□ -1.45
HPS4-201ENST00000336873 IGHV4-4A0A075B6R2 117 aa6□□□□□ -1.45
HPS4-201ENST00000336873 IGHV3-30P01768 117 aa6□□□□□ -1.45
HPS4-201ENST00000336873 IGHV3-30-5P0DP03 117 aa6□□□□□ -1.45
HPS4-201ENST00000336873 FAM19A5Q7Z5A7 132 aaPredicted RBP6□□□□□ -1.45
HPS4-201ENST00000336873 LGALS9O00182 355 aa5.99□□□□□ -1.45
HPS4-201ENST00000336873 MED14OSP0DP75 135 aa5.99□□□□□ -1.45
HPS4-201ENST00000336873 LINC01620Q4KN68 170 aa5.99□□□□□ -1.45
HPS4-201ENST00000336873 FAM236AA0A1B0GUQ0 79 aa5.99□□□□□ -1.45
HPS4-201ENST00000336873 FAM236BA0A1B0GV22 79 aa5.99□□□□□ -1.45
HPS4-201ENST00000336873 TRIAP1O43715 76 aa5.99□□□□□ -1.45
HPS4-201ENST00000336873 CRPP02741 224 aa5.99□□□□□ -1.45
HPS4-201ENST00000336873 ANGP03950 147 aaKnown RBP5.99□□□□□ -1.45
HPS4-201ENST00000336873 UBE2WQ96B02 151 aa5.99□□□□□ -1.45
HPS4-201ENST00000336873 CDIP1Q9H305 208 aa5.99□□□□□ -1.45
HPS4-201ENST00000336873 TMEM223A0PJW6 202 aa5.98□□□□□ -1.45
HPS4-201ENST00000336873 COX6A2Q02221 97 aa5.98□□□□□ -1.45
HPS4-201ENST00000336873 ODF3L2Q3SX64 289 aa5.98□□□□□ -1.45
HPS4-201ENST00000336873 KIF25-AS1Q9Y6Z4 181 aa5.98□□□□□ -1.45
HPS4-201ENST00000336873 IGHV1-58A0A0C4DH39 117 aa5.98□□□□□ -1.45
HPS4-201ENST00000336873 GYPEP15421 78 aa5.98□□□□□ -1.45
HPS4-201ENST00000336873 HRCT1Q6UXD1 115 aa5.98□□□□□ -1.45
HPS4-201ENST00000336873 VSIG2Q96IQ7 327 aa5.98□□□□□ -1.45
HPS4-201ENST00000336873 DNAJC30Q96LL9 226 aa5.98□□□□□ -1.45
HPS4-201ENST00000336873 ICOSQ9Y6W8 199 aa5.98□□□□□ -1.45
HPS4-201ENST00000336873 HERVK_113P63121 156 aa5.98□□□□□ -1.45
HPS4-201ENST00000336873 C9orf85Q96MD7 179 aa5.98□□□□□ -1.45
HPS4-201ENST00000336873 MIR7-3HGQ8N6C7 128 aa5.97□□□□□ -1.45
HPS4-201ENST00000336873 COPS9Q8WXC6 57 aa5.97□□□□□ -1.45
HPS4-201ENST00000336873 IGHV3-33P01772 117 aa5.97□□□□□ -1.45
HPS4-201ENST00000336873 TRACP01848 142 aa5.97□□□□□ -1.45
HPS4-201ENST00000336873 K7EQD1 137 aa5.97□□□□□ -1.45
HPS4-201ENST00000336873 ATP6V0E2Q8NHE4 81 aa5.97□□□□□ -1.45
HPS4-201ENST00000336873 SLPIP03973 132 aa5.96□□□□□ -1.45
HPS4-201ENST00000336873 LRRC75A-AS1Q8N1F1 130 aa5.96□□□□□ -1.45
HPS4-201ENST00000336873 BAHCC1Q9P281 2608 aa5.96□□□□□ -1.46
HPS4-201ENST00000336873 EIF4EBP3O60516 100 aaPredicted RBP5.96□□□□□ -1.46
HPS4-201ENST00000336873 HIST1H4AP62805 103 aaKnown RBP5.96□□□□□ -1.46
HPS4-201ENST00000336873 LINC01006Q8NI28 216 aa5.96□□□□□ -1.46
HPS4-201ENST00000336873 KLK5Q9Y337 293 aaPredicted RBP5.96□□□□□ -1.46
HPS4-201ENST00000336873 PDZD2O15018 2839 aa5.96□□□□□ -1.46
HPS4-201ENST00000336873 A0A0U1RQV1 116 aa5.95□□□□□ -1.46
HPS4-201ENST00000336873 C4orf3Q8WVX3 66 aa5.95□□□□□ -1.46
HPS4-201ENST00000336873 SND1-IT1Q9HBX3 110 aa5.95□□□□□ -1.46
HPS4-201ENST00000336873 UBE2D4Q9Y2X8 147 aa5.95□□□□□ -1.46
HPS4-201ENST00000336873 S100A7L2Q5SY68 101 aa5.94□□□□□ -1.46
HPS4-201ENST00000336873 BAALC-AS2P0C853 105 aa5.94□□□□□ -1.46
HPS4-201ENST00000336873 FHL3Q13643 280 aa5.94□□□□□ -1.46
HPS4-201ENST00000336873 C1orf158Q8N1D5 194 aa5.94□□□□□ -1.46
HPS4-201ENST00000336873 TMEM89A2RUT3 159 aa5.94□□□□□ -1.46
HPS4-201ENST00000336873 SMCPP49901 116 aaPredicted RBP5.94□□□□□ -1.46
HPS4-201ENST00000336873 PRR3P79522 188 aaKnown RBP5.94□□□□□ -1.46
HPS4-201ENST00000336873 V9GYY9 64 aa5.94□□□□□ -1.46
HPS4-201ENST00000336873 INAFM1C9JVW0 142 aa5.93□□□□□ -1.46
HPS4-201ENST00000336873 UBE2D1P51668 147 aa5.93□□□□□ -1.46
HPS4-201ENST00000336873 DAD1P61803 113 aa5.93□□□□□ -1.46
HPS4-201ENST00000336873 IGKV3D-7A0A0C4DH55 119 aa5.92□□□□□ -1.46
HPS4-201ENST00000336873 MRAPQ8TCY5 172 aa5.92□□□□□ -1.46
HPS4-201ENST00000336873 IGLV4-60A0A075B6I1 120 aa5.92□□□□□ -1.46
HPS4-201ENST00000336873 TRBV6-5A0A0K0K1A5 114 aa5.92□□□□□ -1.46
HPS4-201ENST00000336873 LECT2O14960 151 aa5.92□□□□□ -1.46
HPS4-201ENST00000336873 LINC00242Q5T6M2 205 aa5.92□□□□□ -1.46
HPS4-201ENST00000336873 TMEM86BQ8N661 226 aa5.92□□□□□ -1.46
HPS4-201ENST00000336873 TMEM263Q8WUH6 116 aaKnown RBP5.92□□□□□ -1.46
HPS4-201ENST00000336873 CHCHD7Q9BUK0 85 aa5.92□□□□□ -1.46
HPS4-201ENST00000336873 SS18Q15532 418 aa5.91□□□□□ -1.46
HPS4-201ENST00000336873 MIAQ16674 131 aa5.91□□□□□ -1.46
HPS4-201ENST00000336873 LINC00269Q8N2A0 174 aa5.91□□□□□ -1.46
HPS4-201ENST00000336873 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP5.91□□□□□ -1.46
HPS4-201ENST00000336873 LINC00308Q8TCZ7 52 aa5.91□□□□□ -1.46
HPS4-201ENST00000336873 SEC61GP60059 68 aa5.91□□□□□ -1.46
HPS4-201ENST00000336873 FAM222AQ5U5X8 452 aa5.91□□□□□ -1.46
HPS4-201ENST00000336873 PRB2P02812 416 aaPredicted RBP5.91□□□□□ -1.46
HPS4-201ENST00000336873 C9orf116Q5BN46 136 aaPredicted RBP5.91□□□□□ -1.46
HPS4-201ENST00000336873 LAMTOR3Q9UHA4 124 aa5.91□□□□□ -1.46
HPS4-201ENST00000336873 KLK12Q9UKR0 248 aa5.91□□□□□ -1.46
HPS4-201ENST00000336873 hADV29S1A0JD25 119 aa5.9□□□□□ -1.46
HPS4-201ENST00000336873 LINC01546A6NGU7 62 aa5.9□□□□□ -1.46
HPS4-201ENST00000336873 NHLRC4P0CG21 123 aaPredicted RBP5.9□□□□□ -1.46
HPS4-201ENST00000336873 DEFB121Q5J5C9 76 aa5.9□□□□□ -1.46
HPS4-201ENST00000336873 FBN1P35555 2871 aaKnown RBP5.9□□□□□ -1.46
HPS4-201ENST00000336873 COX7B2Q8TF08 81 aa5.9□□□□□ -1.46
HPS4-201ENST00000336873 C14orf132Q9NPU4 83 aa5.9□□□□□ -1.46
HPS4-201ENST00000336873 NCR3O14931 201 aa5.9□□□□□ -1.47
HPS4-201ENST00000336873 Q8N2B8 174 aa5.9□□□□□ -1.47
HPS4-201ENST00000336873 Q8N3U1 123 aa5.9□□□□□ -1.47
HPS4-201ENST00000336873 C3orf22Q8N5N4 141 aa5.9□□□□□ -1.47
HPS4-201ENST00000336873 FAM19A4Q96LR4 140 aa5.9□□□□□ -1.47
HPS4-201ENST00000336873 VWFP04275 2813 aa5.89□□□□□ -1.47
HPS4-201ENST00000336873 TRBV10-2A0A0K0K1G8 114 aa5.89□□□□□ -1.47
HPS4-201ENST00000336873 UQCRQO14949 82 aa5.89□□□□□ -1.47
HPS4-201ENST00000336873 MRPS36P82909 103 aaKnown RBP5.89□□□□□ -1.47
HPS4-201ENST00000336873 DAZ2Q13117 558 aaKnown RBP5.89□□□□□ -1.47
HPS4-201ENST00000336873 DAZ4Q86SG3 579 aaKnown RBP5.89□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 64.5 ms