RNA–Protein interactions for RNA: ENST00000334895.9

TPM1-204, Transcript of tropomyosin 1, humanhuman

TSL 1 (best) BASIC

Gene TPM1, Length 1,637 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-204ENST00000334895 TRAV8-3A0A0A6YYJ7 113 aa14.37□□□□□ -0.11
TPM1-204ENST00000334895 TRAV8-4A0A0B4J246 113 aa14.37□□□□□ -0.11
TPM1-204ENST00000334895 TINCRA0A1B0GVN0 87 aa14.37□□□□□ -0.11
TPM1-204ENST00000334895 CHAC1Q9BUX1 264 aa14.37□□□□□ -0.11
TPM1-204ENST00000334895 AKR1D1P51857 326 aa14.37□□□□□ -0.11
TPM1-204ENST00000334895 DNAH2Q9P225 4427 aa14.36□□□□□ -0.11
TPM1-204ENST00000334895 IGHV3OR16-9A0A0B4J2B5 98 aa14.35□□□□□ -0.11
TPM1-204ENST00000334895 DPM2O94777 84 aa14.35□□□□□ -0.11
TPM1-204ENST00000334895 IGKV2D-24A0A075B6R9 120 aa14.34□□□□□ -0.11
TPM1-204ENST00000334895 IGLV5-45A0A087WSX0 123 aa14.34□□□□□ -0.11
TPM1-204ENST00000334895 C20orf202A1L168 122 aa14.34□□□□□ -0.11
TPM1-204ENST00000334895 FOXI1Q12951 378 aa14.34□□□□□ -0.11
TPM1-204ENST00000334895 JOSD1Q15040 202 aaPredicted RBP14.34□□□□□ -0.11
TPM1-204ENST00000334895 C1orf43Q9BWL3 253 aa14.34□□□□□ -0.11
TPM1-204ENST00000334895 GAGE12HA6NDE8 117 aa14.33□□□□□ -0.11
TPM1-204ENST00000334895 SCGB1D1O95968 90 aa14.33□□□□□ -0.11
TPM1-204ENST00000334895 IGKCP01834 107 aa14.33□□□□□ -0.11
TPM1-204ENST00000334895 ZNF22P17026 224 aaPredicted RBP14.33□□□□□ -0.11
TPM1-204ENST00000334895 HERVK_113P63121 156 aa14.33□□□□□ -0.11
TPM1-204ENST00000334895 SEC11AP67812 179 aa14.33□□□□□ -0.11
TPM1-204ENST00000334895 PYY3Q5JQD4 70 aa14.33□□□□□ -0.11
TPM1-204ENST00000334895 CD164L2Q6UWJ8 174 aa14.33□□□□□ -0.11
TPM1-204ENST00000334895 GEMIN7Q9H840 131 aaKnown RBP14.33□□□□□ -0.11
TPM1-204ENST00000334895 CDKN2A-AS1Q9UH64 79 aa14.33□□□□□ -0.11
TPM1-204ENST00000334895 PLNP26678 52 aa14.33□□□□□ -0.12
TPM1-204ENST00000334895 ATOH7Q8N100 152 aa14.33□□□□□ -0.12
TPM1-204ENST00000334895 RMI2Q96E14 147 aa14.32□□□□□ -0.12
TPM1-204ENST00000334895 LINC00469Q8N7U9 141 aa14.31□□□□□ -0.12
TPM1-204ENST00000334895 C5orf38Q86SI9 138 aa14.3□□□□□ -0.12
TPM1-204ENST00000334895 MAPKAPK5-AS1Q8N8E1 139 aa14.3□□□□□ -0.12
TPM1-204ENST00000334895 COX11Q9Y6N1 276 aa14.3□□□□□ -0.12
TPM1-204ENST00000334895 TMEM170BQ5T4T1 132 aa14.29□□□□□ -0.12
TPM1-204ENST00000334895 Q6ZRN7 208 aaPredicted RBP14.29□□□□□ -0.12
TPM1-204ENST00000334895 A0A087WZ39 114 aa14.28□□□□□ -0.12
TPM1-204ENST00000334895 CDPF1Q6NVV7 123 aa14.27□□□□□ -0.12
TPM1-204ENST00000334895 COX7A2LO14548 114 aa14.26□□□□□ -0.13
TPM1-204ENST00000334895 TM2D2Q9BX73 214 aa14.26□□□□□ -0.13
TPM1-204ENST00000334895 SPINK8P0C7L1 97 aa14.26□□□□□ -0.13
TPM1-204ENST00000334895 MAJINQ3KP22 176 aa14.26□□□□□ -0.13
TPM1-204ENST00000334895 C6orf223Q8N319 242 aa14.26□□□□□ -0.13
TPM1-204ENST00000334895 TMEM223A0PJW6 202 aa14.25□□□□□ -0.13
TPM1-204ENST00000334895 STPG4Q8N801 248 aa14.25□□□□□ -0.13
TPM1-204ENST00000334895 hDV102S1A0JD36 115 aa14.24□□□□□ -0.13
TPM1-204ENST00000334895 SMIM1B2RUZ4 78 aa14.24□□□□□ -0.13
TPM1-204ENST00000334895 H3BRM9 83 aa14.23□□□□□ -0.13
TPM1-204ENST00000334895 DNAH17Q9UFH2 4485 aa14.23□□□□□ -0.13
TPM1-204ENST00000334895 C1orf134Q5TEV5 83 aa14.22□□□□□ -0.13
TPM1-204ENST00000334895 LINC01561Q8N1V8 128 aa14.22□□□□□ -0.13
TPM1-204ENST00000334895 IGHV3-64A0A075B6Q5 118 aa14.21□□□□□ -0.13
TPM1-204ENST00000334895 C15orf56Q8N910 161 aa14.21□□□□□ -0.13
TPM1-204ENST00000334895 IGLV5-39A0A0G2JS06 123 aa14.2□□□□□ -0.14
TPM1-204ENST00000334895 MALP21145 153 aa14.2□□□□□ -0.14
TPM1-204ENST00000334895 ANKRD39Q53RE8 183 aa14.2□□□□□ -0.14
TPM1-204ENST00000334895 WFDC2Q14508 124 aa14.19□□□□□ -0.14
TPM1-204ENST00000334895 IGHV1-58A0A0C4DH39 117 aa14.19□□□□□ -0.14
TPM1-204ENST00000334895 PSCAO43653 123 aa14.19□□□□□ -0.14
TPM1-204ENST00000334895 IGKV2D-26A0A0A0MRZ7 120 aa14.17□□□□□ -0.14
TPM1-204ENST00000334895 USP17L23D6RBM5 183 aa14.17□□□□□ -0.14
TPM1-204ENST00000334895 LECT2O14960 151 aa14.17□□□□□ -0.14
TPM1-204ENST00000334895 SMIM6P0DI80 62 aa14.17□□□□□ -0.14
TPM1-204ENST00000334895 ORAOV1Q8WV07 137 aa14.17□□□□□ -0.14
TPM1-204ENST00000334895 FRAS1Q86XX4 4008 aa14.16□□□□□ -0.14
TPM1-204ENST00000334895 E9PLD3 99 aa14.16□□□□□ -0.14
TPM1-204ENST00000334895 HERVK_113P61574 105 aa14.16□□□□□ -0.14
TPM1-204ENST00000334895 LRCOL1A6NCL2 159 aa14.15□□□□□ -0.14
TPM1-204ENST00000334895 APOMO95445 188 aa14.15□□□□□ -0.14
TPM1-204ENST00000334895 TSPEAR-AS2P59090 65 aa14.15□□□□□ -0.14
TPM1-204ENST00000334895 RTL8CO15255 209 aa14.15□□□□□ -0.14
TPM1-204ENST00000334895 KIAA0087Q14695 138 aa14.15□□□□□ -0.14
TPM1-204ENST00000334895 HIGD2BQ4VC39 106 aa14.14□□□□□ -0.15
TPM1-204ENST00000334895 LINC00526Q96FQ7 95 aa14.14□□□□□ -0.15
TPM1-204ENST00000334895 VAMP8Q9BV40 100 aa14.14□□□□□ -0.15
TPM1-204ENST00000334895 GVQW2A0A096LPI5 108 aaPredicted RBP14.13□□□□□ -0.15
TPM1-204ENST00000334895 HSBP1L1C9JCN9 74 aa14.13□□□□□ -0.15
TPM1-204ENST00000334895 LEPROTO15243 131 aa14.13□□□□□ -0.15
TPM1-204ENST00000334895 TOMM7Q9P0U1 55 aa14.13□□□□□ -0.15
TPM1-204ENST00000334895 PAM16Q9Y3D7 125 aa14.13□□□□□ -0.15
TPM1-204ENST00000334895 SPAG11BQ08648 103 aa14.12□□□□□ -0.15
TPM1-204ENST00000334895 CFAP161Q6P656 301 aa14.12□□□□□ -0.15
TPM1-204ENST00000334895 COX7B2Q8TF08 81 aa14.12□□□□□ -0.15
TPM1-204ENST00000334895 Q8IZM0 81 aa14.12□□□□□ -0.15
TPM1-204ENST00000334895 FAT2Q9NYQ8 4349 aa14.11□□□□□ -0.15
TPM1-204ENST00000334895 J3QQQ9 107 aa14.1□□□□□ -0.15
TPM1-204ENST00000334895 SPATA45Q537H7 98 aa14.1□□□□□ -0.15
TPM1-204ENST00000334895 PLEKHB2Q96CS7 222 aa14.1□□□□□ -0.15
TPM1-204ENST00000334895 TTTY13Q9BZ97 58 aa14.1□□□□□ -0.15
TPM1-204ENST00000334895 NMUP48645 174 aa14.09□□□□□ -0.15
TPM1-204ENST00000334895 A0A087WTM6 91 aa14.08□□□□□ -0.15
TPM1-204ENST00000334895 TNP2Q05952 138 aa14.08□□□□□ -0.16
TPM1-204ENST00000334895 C2orf82Q6UX34 121 aa14.08□□□□□ -0.16
TPM1-204ENST00000334895 PCP2Q8IVA1 136 aa14.08□□□□□ -0.16
TPM1-204ENST00000334895 NTN5Q8WTR8 489 aaPredicted RBP14.08□□□□□ -0.16
TPM1-204ENST00000334895 ZNF561-AS1K7EIQ3 104 aa14.07□□□□□ -0.16
TPM1-204ENST00000334895 PRSS2P07478 247 aa14.07□□□□□ -0.16
TPM1-204ENST00000334895 C6orf226Q5I0X4 101 aa14.07□□□□□ -0.16
TPM1-204ENST00000334895 SLPIP03973 132 aa14.06□□□□□ -0.16
TPM1-204ENST00000334895 C14orf177Q52M58 125 aa14.06□□□□□ -0.16
TPM1-204ENST00000334895 C12orf57Q99622 126 aa14.06□□□□□ -0.16
TPM1-204ENST00000334895 DNAH11Q96DT5 4516 aa14.06□□□□□ -0.16
TPM1-204ENST00000334895 LGALS3P17931 250 aaKnown RBP14.05□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 115.7 ms