RNA–Protein interactions for RNA: ENST00000334690.10

TRAPPC11-201, Transcript of trafficking protein particle complex 11, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAPPC11, Length 4,552 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-201ENST00000334690 IMUPQ9GZP8 106 aa12.43□□□□□ -0.42
TRAPPC11-201ENST00000334690 EDN2P20800 178 aa12.43□□□□□ -0.42
TRAPPC11-201ENST00000334690 SPATA25Q9BR10 227 aa12.43□□□□□ -0.42
TRAPPC11-201ENST00000334690 LELP1Q5T871 98 aa12.42□□□□□ -0.42
TRAPPC11-201ENST00000334690 ADAMTS20P59510 1910 aa12.42□□□□□ -0.42
TRAPPC11-201ENST00000334690 IGLV4-69A0A075B6H9 119 aa12.42□□□□□ -0.42
TRAPPC11-201ENST00000334690 IGLV2-18A0A075B6J9 118 aa12.42□□□□□ -0.42
TRAPPC11-201ENST00000334690 SYCNQ0VAF6 134 aa12.42□□□□□ -0.42
TRAPPC11-201ENST00000334690 SHISA2Q6UWI4 295 aa12.41□□□□□ -0.42
TRAPPC11-201ENST00000334690 MUC7Q8TAX7 377 aa12.41□□□□□ -0.42
TRAPPC11-201ENST00000334690 IGKV2-24A0A0C4DH68 120 aa12.41□□□□□ -0.42
TRAPPC11-201ENST00000334690 RAI1Q7Z5J4 1906 aaPredicted RBP12.41□□□□□ -0.42
TRAPPC11-201ENST00000334690 HIGD2AQ9BW72 106 aa12.4□□□□□ -0.42
TRAPPC11-201ENST00000334690 LY6G6DO95868 133 aa12.39□□□□□ -0.43
TRAPPC11-201ENST00000334690 Q8IZM0 81 aa12.39□□□□□ -0.43
TRAPPC11-201ENST00000334690 ZNF462Q96JM2 2506 aa12.39□□□□□ -0.43
TRAPPC11-201ENST00000334690 IL17DQ8TAD2 202 aa12.38□□□□□ -0.43
TRAPPC11-201ENST00000334690 FAM110AQ9BQ89 295 aa12.38□□□□□ -0.43
TRAPPC11-201ENST00000334690 C20orf197Q8N268 126 aa12.38□□□□□ -0.43
TRAPPC11-201ENST00000334690 SMIM11BQ8TCY0 68 aa12.38□□□□□ -0.43
TRAPPC11-201ENST00000334690 COX17Q14061 63 aa12.38□□□□□ -0.43
TRAPPC11-201ENST00000334690 TET2Q6N021 2002 aaPredicted RBP12.38□□□□□ -0.43
TRAPPC11-201ENST00000334690 B9D2Q9BPU9 175 aa12.37□□□□□ -0.43
TRAPPC11-201ENST00000334690 SMIM1B2RUZ4 78 aa12.37□□□□□ -0.43
TRAPPC11-201ENST00000334690 NDUFA7O95182 113 aa12.37□□□□□ -0.43
TRAPPC11-201ENST00000334690 Q6ZQY7 126 aa12.37□□□□□ -0.43
TRAPPC11-201ENST00000334690 WFDC9Q8NEX5 89 aa12.37□□□□□ -0.43
TRAPPC11-201ENST00000334690 AMELXQ99217 191 aa12.37□□□□□ -0.43
TRAPPC11-201ENST00000334690 CSDC2Q9Y534 153 aaKnown RBP12.37□□□□□ -0.43
TRAPPC11-201ENST00000334690 IGLV1-51P01701 117 aa12.36□□□□□ -0.43
TRAPPC11-201ENST00000334690 KPRPQ5T749 579 aaPredicted RBP12.36□□□□□ -0.43
TRAPPC11-201ENST00000334690 CHCHD7Q9BUK0 85 aa12.36□□□□□ -0.43
TRAPPC11-201ENST00000334690 XGP55808 180 aa12.35□□□□□ -0.43
TRAPPC11-201ENST00000334690 AGRNO00468 2067 aa12.35□□□□□ -0.43
TRAPPC11-201ENST00000334690 POLQO75417 2590 aa12.35□□□□□ -0.43
TRAPPC11-201ENST00000334690 FASNP49327 2511 aaKnown RBP12.35□□□□□ -0.43
TRAPPC11-201ENST00000334690 PRRC2CQ9Y520 2896 aaKnown RBP12.35□□□□□ -0.43
TRAPPC11-201ENST00000334690 ENHOQ6UWT2 76 aa12.35□□□□□ -0.43
TRAPPC11-201ENST00000334690 TSPEAR-AS2P59090 65 aa12.34□□□□□ -0.43
TRAPPC11-201ENST00000334690 C1orf158Q8N1D5 194 aa12.34□□□□□ -0.43
TRAPPC11-201ENST00000334690 BEAN1Q3B7T3 259 aa12.34□□□□□ -0.43
TRAPPC11-201ENST00000334690 TRAV10A0A0B4J240 114 aa12.34□□□□□ -0.43
TRAPPC11-201ENST00000334690 KRTAP10-9P60411 292 aa12.34□□□□□ -0.43
TRAPPC11-201ENST00000334690 FAM240AA0A1B0GVK7 77 aa12.33□□□□□ -0.44
TRAPPC11-201ENST00000334690 M0R378 163 aa12.33□□□□□ -0.44
TRAPPC11-201ENST00000334690 C3orf22Q8N5N4 141 aa12.33□□□□□ -0.44
TRAPPC11-201ENST00000334690 CCKP06307 115 aa12.32□□□□□ -0.44
TRAPPC11-201ENST00000334690 LINC00526Q96FQ7 95 aa12.32□□□□□ -0.44
TRAPPC11-201ENST00000334690 A0A087WZ39 114 aa12.32□□□□□ -0.44
TRAPPC11-201ENST00000334690 CLUHP3Q96NS8 147 aa12.31□□□□□ -0.44
TRAPPC11-201ENST00000334690 H0Y9J4 135 aa12.31□□□□□ -0.44
TRAPPC11-201ENST00000334690 FAM19A1Q7Z5A9 133 aa12.3□□□□□ -0.44
TRAPPC11-201ENST00000334690 USP17L23D6RBM5 183 aa12.29□□□□□ -0.44
TRAPPC11-201ENST00000334690 NDUFC2O95298 119 aa12.29□□□□□ -0.44
TRAPPC11-201ENST00000334690 KIF25-AS1Q9Y6Z4 181 aa12.29□□□□□ -0.44
TRAPPC11-201ENST00000334690 RPL28P46779 137 aaKnown RBP12.28□□□□□ -0.44
TRAPPC11-201ENST00000334690 SERP2Q8N6R1 65 aa12.28□□□□□ -0.44
TRAPPC11-201ENST00000334690 LINC00694P0DN24 101 aa12.28□□□□□ -0.44
TRAPPC11-201ENST00000334690 CYSRT1A8MQ03 144 aa12.28□□□□□ -0.44
TRAPPC11-201ENST00000334690 SCXQ7RTU7 201 aa12.28□□□□□ -0.44
TRAPPC11-201ENST00000334690 Q6Q795 121 aa12.27□□□□□ -0.45
TRAPPC11-201ENST00000334690 C5orf47Q569G3 176 aa12.27□□□□□ -0.45
TRAPPC11-201ENST00000334690 C4orf48Q5BLP8 95 aa12.27□□□□□ -0.45
TRAPPC11-201ENST00000334690 DHRS4-AS1Q9P1J3 65 aa12.27□□□□□ -0.45
TRAPPC11-201ENST00000334690 ZNF73O43830 326 aaPredicted RBP12.26□□□□□ -0.45
TRAPPC11-201ENST00000334690 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP12.26□□□□□ -0.45
TRAPPC11-201ENST00000334690 FAM19A5Q7Z5A7 132 aaPredicted RBP12.26□□□□□ -0.45
TRAPPC11-201ENST00000334690 IGHV4-30-4P0DP06 118 aa12.26□□□□□ -0.45
TRAPPC11-201ENST00000334690 ADAMTSL4-AS1Q5T5F5 129 aa12.26□□□□□ -0.45
TRAPPC11-201ENST00000334690 COX6A2Q02221 97 aa12.25□□□□□ -0.45
TRAPPC11-201ENST00000334690 ACANP16112 2415 aa12.25□□□□□ -0.45
TRAPPC11-201ENST00000334690 IGLV4-60A0A075B6I1 120 aa12.25□□□□□ -0.45
TRAPPC11-201ENST00000334690 IGKV2-28A0A075B6P5 120 aa12.25□□□□□ -0.45
TRAPPC11-201ENST00000334690 FAM236DA0A1B0GTK5 79 aa12.25□□□□□ -0.45
TRAPPC11-201ENST00000334690 IGKV2D-28P01615 120 aa12.25□□□□□ -0.45
TRAPPC11-201ENST00000334690 FAM236CP0DP71 79 aa12.25□□□□□ -0.45
TRAPPC11-201ENST00000334690 FHL2Q14192 279 aa12.25□□□□□ -0.45
TRAPPC11-201ENST00000334690 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP12.25□□□□□ -0.45
TRAPPC11-201ENST00000334690 CHKB-CPT1BH3BT56 60 aa12.24□□□□□ -0.45
TRAPPC11-201ENST00000334690 PRB2P02812 416 aaPredicted RBP12.24□□□□□ -0.45
TRAPPC11-201ENST00000334690 LINC01546A6NGU7 62 aa12.23□□□□□ -0.45
TRAPPC11-201ENST00000334690 C16orf95Q9H693 158 aa12.23□□□□□ -0.45
TRAPPC11-201ENST00000334690 UNQ6190/PRO20217Q6UXQ8 127 aa12.23□□□□□ -0.45
TRAPPC11-201ENST00000334690 Q6JHZ5 121 aa12.22□□□□□ -0.45
TRAPPC11-201ENST00000334690 DNAH12Q6ZR08 3092 aa12.22□□□□□ -0.45
TRAPPC11-201ENST00000334690 A0A096LNI7 61 aa12.22□□□□□ -0.45
TRAPPC11-201ENST00000334690 EGFEM1PQ0D2K5 195 aa12.22□□□□□ -0.45
TRAPPC11-201ENST00000334690 COL4A2P08572 1712 aa12.22□□□□□ -0.45
TRAPPC11-201ENST00000334690 Q6ZSN1 163 aa12.22□□□□□ -0.45
TRAPPC11-201ENST00000334690 COX7CP15954 63 aa12.21□□□□□ -0.45
TRAPPC11-201ENST00000334690 NTM-AS1Q6ZSK4 140 aa12.21□□□□□ -0.45
TRAPPC11-201ENST00000334690 PLA2G2AP14555 144 aa12.2□□□□□ -0.46
TRAPPC11-201ENST00000334690 ANKRD17O75179 2603 aaKnown RBP12.2□□□□□ -0.46
TRAPPC11-201ENST00000334690 EPG5Q9HCE0 2579 aa12.2□□□□□ -0.46
TRAPPC11-201ENST00000334690 IGLV2-33A0A075B6J2 118 aaPredicted RBP12.2□□□□□ -0.46
TRAPPC11-201ENST00000334690 A0A1B0GUV1 79 aa12.2□□□□□ -0.46
TRAPPC11-201ENST00000334690 C3orf84H3BNL1 204 aa12.2□□□□□ -0.46
TRAPPC11-201ENST00000334690 NDUFC1O43677 76 aa12.2□□□□□ -0.46
TRAPPC11-201ENST00000334690 OXLD1Q5BKU9 147 aa12.19□□□□□ -0.46
TRAPPC11-201ENST00000334690 LINC00315P59091 139 aa12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 72.9 ms