RNA–Protein interactions for RNA: ENST00000334504.11

COL4A6-201, Transcript of collagen type IV alpha 6 chain, humanhuman

APPRIS P1 TSL 5 BASIC

Gene COL4A6, Length 6,700 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-201ENST00000334504 DENND4CQ5VZ89 1909 aa7.18□□□□□ -1.26
COL4A6-201ENST00000334504 PLXNB3Q9ULL4 1909 aa7.18□□□□□ -1.26
COL4A6-201ENST00000334504 RPL28P46779 137 aaKnown RBP7.18□□□□□ -1.26
COL4A6-201ENST00000334504 MED13Q9UHV7 2174 aa7.18□□□□□ -1.26
COL4A6-201ENST00000334504 C7orf33Q8WU49 177 aa7.18□□□□□ -1.26
COL4A6-201ENST00000334504 ZNF706Q9Y5V0 76 aaPredicted RBP7.18□□□□□ -1.26
COL4A6-201ENST00000334504 MED13LQ71F56 2210 aa7.17□□□□□ -1.26
COL4A6-201ENST00000334504 PRM2P04554 102 aa7.17□□□□□ -1.26
COL4A6-201ENST00000334504 LINC01547P58512 204 aaPredicted RBP7.17□□□□□ -1.26
COL4A6-201ENST00000334504 Q8IZM0 81 aa7.17□□□□□ -1.26
COL4A6-201ENST00000334504 TMEM254Q8TBM7 123 aa7.17□□□□□ -1.26
COL4A6-201ENST00000334504 ZNF106Q9H2Y7 1883 aaKnown RBP7.16□□□□□ -1.26
COL4A6-201ENST00000334504 TNFRSF13BO14836 293 aaPredicted RBP7.16□□□□□ -1.26
COL4A6-201ENST00000334504 C1orf137Q5JT78 98 aa7.16□□□□□ -1.26
COL4A6-201ENST00000334504 ADAMTSL4-AS1Q5T5F5 129 aa7.16□□□□□ -1.26
COL4A6-201ENST00000334504 CDC42SE2Q9NRR3 84 aa7.16□□□□□ -1.26
COL4A6-201ENST00000334504 H0Y9P7 68 aa7.16□□□□□ -1.26
COL4A6-201ENST00000334504 PLAC8L1A1L4L8 177 aa7.15□□□□□ -1.26
COL4A6-201ENST00000334504 WISP2O76076 250 aa7.15□□□□□ -1.26
COL4A6-201ENST00000334504 C10orf25Q5T742 122 aa7.15□□□□□ -1.26
COL4A6-201ENST00000334504 NOTCH2Q04721 2471 aa7.15□□□□□ -1.26
COL4A6-201ENST00000334504 COX6A2Q02221 97 aa7.15□□□□□ -1.26
COL4A6-201ENST00000334504 PRR3P79522 188 aaKnown RBP7.15□□□□□ -1.26
COL4A6-201ENST00000334504 RETNLBQ9BQ08 111 aa7.15□□□□□ -1.26
COL4A6-201ENST00000334504 OTOGLQ3ZCN5 2332 aa7.15□□□□□ -1.27
COL4A6-201ENST00000334504 VPREB1P12018 145 aa7.14□□□□□ -1.27
COL4A6-201ENST00000334504 LINC00242Q5T6M2 205 aa7.14□□□□□ -1.27
COL4A6-201ENST00000334504 DAZAP2Q15038 168 aaPredicted RBP7.14□□□□□ -1.27
COL4A6-201ENST00000334504 KLLNB2CW77 178 aa7.14□□□□□ -1.27
COL4A6-201ENST00000334504 IGF2-ASQ6U949 168 aa7.14□□□□□ -1.27
COL4A6-201ENST00000334504 LINC00575Q6W349 94 aa7.14□□□□□ -1.27
COL4A6-201ENST00000334504 LINC00846Q9NV44 126 aa7.14□□□□□ -1.27
COL4A6-201ENST00000334504 CYSRT1A8MQ03 144 aa7.14□□□□□ -1.27
COL4A6-201ENST00000334504 C10orf99Q6UWK7 81 aa7.13□□□□□ -1.27
COL4A6-201ENST00000334504 SMR3AQ99954 134 aa7.13□□□□□ -1.27
COL4A6-201ENST00000334504 TMEM131Q92545 1883 aa7.13□□□□□ -1.27
COL4A6-201ENST00000334504 TRBV10-3A0A0K0K1G6 114 aa7.13□□□□□ -1.27
COL4A6-201ENST00000334504 SMIM1B2RUZ4 78 aa7.13□□□□□ -1.27
COL4A6-201ENST00000334504 C19orf84I3L1E1 186 aa7.13□□□□□ -1.27
COL4A6-201ENST00000334504 C9orf116Q5BN46 136 aaPredicted RBP7.13□□□□□ -1.27
COL4A6-201ENST00000334504 IGHV6-1A0A0B4J1U7 121 aa7.13□□□□□ -1.27
COL4A6-201ENST00000334504 CNFNQ9BYD5 112 aa7.13□□□□□ -1.27
COL4A6-201ENST00000334504 LMO4P61968 165 aa7.13□□□□□ -1.27
COL4A6-201ENST00000334504 Q8N6K4 173 aa7.13□□□□□ -1.27
COL4A6-201ENST00000334504 SPINK1P00995 79 aa7.12□□□□□ -1.27
COL4A6-201ENST00000334504 ZNF580Q9UK33 172 aa7.12□□□□□ -1.27
COL4A6-201ENST00000334504 TTC28Q96AY4 2481 aa7.12□□□□□ -1.27
COL4A6-201ENST00000334504 Q6YL49 198 aa7.12□□□□□ -1.27
COL4A6-201ENST00000334504 KIAA1549LQ6ZVL6 1849 aa7.12□□□□□ -1.27
COL4A6-201ENST00000334504 RPS28P62857 69 aaKnown RBP7.12□□□□□ -1.27
COL4A6-201ENST00000334504 LELP1Q5T871 98 aa7.12□□□□□ -1.27
COL4A6-201ENST00000334504 Q9UF83 564 aa7.11□□□□□ -1.27
COL4A6-201ENST00000334504 UNQ6190/PRO20217Q6UXQ8 127 aa7.11□□□□□ -1.27
COL4A6-201ENST00000334504 C2orf16Q68DN1 1984 aa7.11□□□□□ -1.27
COL4A6-201ENST00000334504 X6R8D5 127 aa7.11□□□□□ -1.27
COL4A6-201ENST00000334504 DEFB116Q30KQ4 102 aa7.11□□□□□ -1.27
COL4A6-201ENST00000334504 MUC7Q8TAX7 377 aa7.1□□□□□ -1.27
COL4A6-201ENST00000334504 CHCHD7Q9BUK0 85 aa7.1□□□□□ -1.27
COL4A6-201ENST00000334504 COL4A4P53420 1690 aaPredicted RBP7.09□□□□□ -1.27
COL4A6-201ENST00000334504 LIMD2Q9BT23 127 aa7.09□□□□□ -1.27
COL4A6-201ENST00000334504 HIVEP2P31629 2446 aa7.09□□□□□ -1.27
COL4A6-201ENST00000334504 HCG22E2RYF7 251 aa7.09□□□□□ -1.27
COL4A6-201ENST00000334504 NOTCH4Q99466 2003 aa7.09□□□□□ -1.28
COL4A6-201ENST00000334504 A0A096LNJ9 63 aa7.09□□□□□ -1.28
COL4A6-201ENST00000334504 KPRPQ5T749 579 aaPredicted RBP7.09□□□□□ -1.28
COL4A6-201ENST00000334504 hDV103S1A0JD37 113 aa7.08□□□□□ -1.28
COL4A6-201ENST00000334504 KIAA1549Q9HCM3 1950 aa7.08□□□□□ -1.28
COL4A6-201ENST00000334504 NUPR2A6NF83 97 aa7.08□□□□□ -1.28
COL4A6-201ENST00000334504 PTPN13Q12923 2485 aa7.08□□□□□ -1.28
COL4A6-201ENST00000334504 PCDH15Q96QU1 1955 aa7.08□□□□□ -1.28
COL4A6-201ENST00000334504 TNCP24821 2201 aa7.07□□□□□ -1.28
COL4A6-201ENST00000334504 TECTAO75443 2155 aa7.07□□□□□ -1.28
COL4A6-201ENST00000334504 REG3GQ6UW15 175 aa7.07□□□□□ -1.28
COL4A6-201ENST00000334504 PSMG3-AS1Q96PY0 264 aa7.07□□□□□ -1.28
COL4A6-201ENST00000334504 A0A1W2PNU3 283 aaPredicted RBP7.07□□□□□ -1.28
COL4A6-201ENST00000334504 SPAG11AQ6PDA7 123 aa7.07□□□□□ -1.28
COL4A6-201ENST00000334504 C18orf65Q6ZTR6 163 aa7.06□□□□□ -1.28
COL4A6-201ENST00000334504 CUL9Q8IWT3 2517 aa7.06□□□□□ -1.28
COL4A6-201ENST00000334504 OXLD1Q5BKU9 147 aa7.06□□□□□ -1.28
COL4A6-201ENST00000334504 NCOA6Q14686 2063 aaPredicted RBP7.06□□□□□ -1.28
COL4A6-201ENST00000334504 PLA2G2AP14555 144 aa7.05□□□□□ -1.28
COL4A6-201ENST00000334504 CXCL6P80162 114 aa7.05□□□□□ -1.28
COL4A6-201ENST00000334504 FBXL19-AS1Q494R0 122 aa7.05□□□□□ -1.28
COL4A6-201ENST00000334504 SMIM29Q86T20 159 aa7.05□□□□□ -1.28
COL4A6-201ENST00000334504 TRAV10A0A0B4J240 114 aa7.05□□□□□ -1.28
COL4A6-201ENST00000334504 C1orf64Q8NEQ6 169 aa7.05□□□□□ -1.28
COL4A6-201ENST00000334504 CIRBP-AS1Q8TBR5 109 aa7.05□□□□□ -1.28
COL4A6-201ENST00000334504 AMELXQ99217 191 aa7.05□□□□□ -1.28
COL4A6-201ENST00000334504 TANC2Q9HCD6 1990 aa7.05□□□□□ -1.28
COL4A6-201ENST00000334504 A0A087WSZ3 146 aa7.05□□□□□ -1.28
COL4A6-201ENST00000334504 ACACBO00763 2458 aa7.05□□□□□ -1.28
COL4A6-201ENST00000334504 IGLV4-60A0A075B6I1 120 aa7.05□□□□□ -1.28
COL4A6-201ENST00000334504 SONP18583 2426 aaKnown RBP7.05□□□□□ -1.28
COL4A6-201ENST00000334504 EGFEM1PQ0D2K5 195 aa7.05□□□□□ -1.28
COL4A6-201ENST00000334504 Q9BRP9 147 aa7.04□□□□□ -1.28
COL4A6-201ENST00000334504 SBSPONQ8IVN8 264 aa7.04□□□□□ -1.28
COL4A6-201ENST00000334504 A8MTW9 85 aa7.04□□□□□ -1.28
COL4A6-201ENST00000334504 FSTL3O95633 263 aa7.03□□□□□ -1.28
COL4A6-201ENST00000334504 MRGPRG-AS1Q2M3A8 158 aa7.03□□□□□ -1.28
COL4A6-201ENST00000334504 SMCPP49901 116 aaPredicted RBP7.03□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 384.3 ms