RNA–Protein interactions for RNA: ENST00000330852.9

RAB28-202, Transcript of RAB28, member RAS oncogene family, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene RAB28, Length 1,715 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB28-202ENST00000330852 PKIGQ9Y2B9 76 aa11.52□□□□□ -0.57
RAB28-202ENST00000330852 RIGQ13278 110 aa11.51□□□□□ -0.57
RAB28-202ENST00000330852 MRPL54Q6P161 138 aaKnown RBP11.51□□□□□ -0.57
RAB28-202ENST00000330852 MRPL52Q86TS9 123 aaKnown RBP11.51□□□□□ -0.57
RAB28-202ENST00000330852 FOXI1Q12951 378 aa11.5□□□□□ -0.57
RAB28-202ENST00000330852 Q6ZRU5 148 aa11.5□□□□□ -0.57
RAB28-202ENST00000330852 NUP35Q8NFH5 326 aa11.5□□□□□ -0.57
RAB28-202ENST00000330852 LINC00959A0A1B0GUT2 108 aa11.49□□□□□ -0.57
RAB28-202ENST00000330852 CHTF8P0CG12 524 aa11.49□□□□□ -0.57
RAB28-202ENST00000330852 SMAGPQ0VAQ4 97 aa11.49□□□□□ -0.57
RAB28-202ENST00000330852 HIGD2BQ4VC39 106 aa11.49□□□□□ -0.57
RAB28-202ENST00000330852 A0A1B0GXF2 115 aa11.49□□□□□ -0.57
RAB28-202ENST00000330852 HNRNPA3P51991 378 aaKnown RBP11.49□□□□□ -0.57
RAB28-202ENST00000330852 COX6A2Q02221 97 aa11.49□□□□□ -0.57
RAB28-202ENST00000330852 SS18Q15532 418 aa11.49□□□□□ -0.57
RAB28-202ENST00000330852 BAGE3Q86Y29 109 aa11.49□□□□□ -0.57
RAB28-202ENST00000330852 IGHV1-58A0A0C4DH39 117 aa11.48□□□□□ -0.57
RAB28-202ENST00000330852 VCYO14598 125 aa11.48□□□□□ -0.57
RAB28-202ENST00000330852 GAS8-AS1O95177 125 aa11.48□□□□□ -0.57
RAB28-202ENST00000330852 KIAA1644Q3SXP7 199 aa11.48□□□□□ -0.57
RAB28-202ENST00000330852 ATP5L2Q7Z4Y8 100 aa11.48□□□□□ -0.57
RAB28-202ENST00000330852 AMN1Q8IY45 258 aa11.48□□□□□ -0.57
RAB28-202ENST00000330852 CDC42SE2Q9NRR3 84 aa11.48□□□□□ -0.57
RAB28-202ENST00000330852 PKHD1L1Q86WI1 4243 aa11.48□□□□□ -0.57
RAB28-202ENST00000330852 FAT3Q8TDW7 4589 aa11.48□□□□□ -0.57
RAB28-202ENST00000330852 XCL1P47992 114 aa11.47□□□□□ -0.57
RAB28-202ENST00000330852 C7orf33Q8WU49 177 aa11.47□□□□□ -0.57
RAB28-202ENST00000330852 CCL25O15444 150 aa11.46□□□□□ -0.57
RAB28-202ENST00000330852 SCGB1D1O95968 90 aa11.46□□□□□ -0.57
RAB28-202ENST00000330852 LINC00474Q9P2X8 69 aa11.46□□□□□ -0.57
RAB28-202ENST00000330852 CD164L2Q6UWJ8 174 aa11.46□□□□□ -0.58
RAB28-202ENST00000330852 TEX43Q6ZNM6 134 aa11.46□□□□□ -0.58
RAB28-202ENST00000330852 PRSS3P2Q8NHM4 247 aa11.46□□□□□ -0.58
RAB28-202ENST00000330852 CSDC2Q9Y534 153 aaKnown RBP11.46□□□□□ -0.58
RAB28-202ENST00000330852 FCER1GP30273 86 aa11.45□□□□□ -0.58
RAB28-202ENST00000330852 C18orf32Q8TCD1 76 aa11.45□□□□□ -0.58
RAB28-202ENST00000330852 SUMO2P61956 95 aaKnown RBP11.44□□□□□ -0.58
RAB28-202ENST00000330852 MAJINQ3KP22 176 aa11.44□□□□□ -0.58
RAB28-202ENST00000330852 KIR2DL4Q99706 377 aa11.44□□□□□ -0.58
RAB28-202ENST00000330852 A0A1B0GW15 77 aa11.43□□□□□ -0.58
RAB28-202ENST00000330852 NRACQ8N912 160 aa11.43□□□□□ -0.58
RAB28-202ENST00000330852 IGKV2-24A0A0C4DH68 120 aa11.42□□□□□ -0.58
RAB28-202ENST00000330852 FAM104BQ5XKR9 115 aa11.42□□□□□ -0.58
RAB28-202ENST00000330852 ALKBH7Q9BT30 221 aaPredicted RBP11.42□□□□□ -0.58
RAB28-202ENST00000330852 ZNF561-AS1K7EIQ3 104 aa11.41□□□□□ -0.58
RAB28-202ENST00000330852 TCAPO15273 167 aa11.41□□□□□ -0.58
RAB28-202ENST00000330852 HBBP68871 147 aa11.41□□□□□ -0.58
RAB28-202ENST00000330852 LBHQ53QV2 105 aaPredicted RBP11.41□□□□□ -0.58
RAB28-202ENST00000330852 STPG4Q8N801 248 aa11.41□□□□□ -0.58
RAB28-202ENST00000330852 CARD19Q96LW7 228 aa11.41□□□□□ -0.58
RAB28-202ENST00000330852 C2orf88Q9BSF0 95 aa11.41□□□□□ -0.58
RAB28-202ENST00000330852 C20orf78Q9BR46 151 aa11.4□□□□□ -0.58
RAB28-202ENST00000330852 SMKR1H3BMG3 65 aa11.4□□□□□ -0.58
RAB28-202ENST00000330852 RPL32P62910 135 aaKnown RBP11.4□□□□□ -0.58
RAB28-202ENST00000330852 TIMM21Q9BVV7 248 aa11.4□□□□□ -0.58
RAB28-202ENST00000330852 UBE2D4Q9Y2X8 147 aa11.4□□□□□ -0.58
RAB28-202ENST00000330852 A0A096LNI7 61 aa11.39□□□□□ -0.59
RAB28-202ENST00000330852 SYCNQ0VAF6 134 aa11.39□□□□□ -0.59
RAB28-202ENST00000330852 MRPL51Q4U2R6 128 aaKnown RBP11.39□□□□□ -0.59
RAB28-202ENST00000330852 PLA2G2DQ9UNK4 145 aa11.39□□□□□ -0.59
RAB28-202ENST00000330852 CAMPP49913 170 aa11.38□□□□□ -0.59
RAB28-202ENST00000330852 COX7A2LO14548 114 aa11.38□□□□□ -0.59
RAB28-202ENST00000330852 MT1HL1P0DM35 61 aa11.38□□□□□ -0.59
RAB28-202ENST00000330852 MALP21145 153 aa11.38□□□□□ -0.59
RAB28-202ENST00000330852 URB1-AS1Q96HZ7 61 aa11.38□□□□□ -0.59
RAB28-202ENST00000330852 LINC00469Q8N7U9 141 aa11.37□□□□□ -0.59
RAB28-202ENST00000330852 C3orf79P0CE67 100 aa11.36□□□□□ -0.59
RAB28-202ENST00000330852 CKS2P33552 79 aa11.36□□□□□ -0.59
RAB28-202ENST00000330852 KRTDAPP60985 99 aa11.36□□□□□ -0.59
RAB28-202ENST00000330852 FAM19A2Q8N3H0 131 aa11.36□□□□□ -0.59
RAB28-202ENST00000330852 LINC00526Q96FQ7 95 aa11.36□□□□□ -0.59
RAB28-202ENST00000330852 A0A1B0GV90 55 aa11.35□□□□□ -0.59
RAB28-202ENST00000330852 VAMP8Q9BV40 100 aa11.35□□□□□ -0.59
RAB28-202ENST00000330852 APOMO95445 188 aa11.35□□□□□ -0.59
RAB28-202ENST00000330852 PRR3P79522 188 aaKnown RBP11.35□□□□□ -0.59
RAB28-202ENST00000330852 SNHG12Q9BXW3 62 aa11.35□□□□□ -0.59
RAB28-202ENST00000330852 LOC107984640A0A0U1RRK4 108 aa11.34□□□□□ -0.59
RAB28-202ENST00000330852 C2orf48Q96LS8 159 aa11.34□□□□□ -0.59
RAB28-202ENST00000330852 MIEN1Q9BRT3 115 aa11.34□□□□□ -0.59
RAB28-202ENST00000330852 IGLV4-69A0A075B6H9 119 aa11.33□□□□□ -0.6
RAB28-202ENST00000330852 TRAV13-1A0A0B4J241 112 aa11.33□□□□□ -0.6
RAB28-202ENST00000330852 TNFRSF6BO95407 300 aa11.33□□□□□ -0.6
RAB28-202ENST00000330852 PPBPP02775 128 aa11.33□□□□□ -0.6
RAB28-202ENST00000330852 HSBP1O75506 76 aa11.32□□□□□ -0.6
RAB28-202ENST00000330852 PAM16Q9Y3D7 125 aa11.32□□□□□ -0.6
RAB28-202ENST00000330852 HMCN2Q8NDA2 5059 aa11.32□□□□□ -0.6
RAB28-202ENST00000330852 PTTG1IPP53801 180 aa11.32□□□□□ -0.6
RAB28-202ENST00000330852 Q6ZUT4 128 aa11.32□□□□□ -0.6
RAB28-202ENST00000330852 SMIM2Q9BVW6 85 aa11.32□□□□□ -0.6
RAB28-202ENST00000330852 SPANXA1Q9NS26 97 aa11.32□□□□□ -0.6
RAB28-202ENST00000330852 CHCHD1Q96BP2 118 aaKnown RBP11.31□□□□□ -0.6
RAB28-202ENST00000330852 CAMK2N2Q96S95 79 aa11.31□□□□□ -0.6
RAB28-202ENST00000330852 F8WDY8 70 aa11.3□□□□□ -0.6
RAB28-202ENST00000330852 M0R143 59 aa11.3□□□□□ -0.6
RAB28-202ENST00000330852 RNASE13Q5GAN3 156 aaKnown RBP11.3□□□□□ -0.6
RAB28-202ENST00000330852 D6R8Y8 96 aa11.29□□□□□ -0.6
RAB28-202ENST00000330852 MRPS36P82909 103 aaKnown RBP11.29□□□□□ -0.6
RAB28-202ENST00000330852 RNF151Q2KHN1 245 aa11.29□□□□□ -0.6
RAB28-202ENST00000330852 SPINK6Q6UWN8 80 aa11.29□□□□□ -0.6
RAB28-202ENST00000330852 Q6ZRP5 223 aa11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 8.4 ms