RNA–Protein interactions for RNA: ENST00000322344.7

PNKP-201, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PNKP, Length 2,041 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-201ENST00000322344 KIR2DL5BQ8NHK3 375 aa15.78■□□□□ 0.12
PNKP-201ENST00000322344 ZNF625Q96I27 306 aaPredicted RBP15.78■□□□□ 0.12
PNKP-201ENST00000322344 LINC00308Q8TCZ7 52 aa15.78■□□□□ 0.12
PNKP-201ENST00000322344 PRIMA1Q86XR5 153 aa15.77■□□□□ 0.11
PNKP-201ENST00000322344 DAND5Q8N907 189 aa15.77■□□□□ 0.11
PNKP-201ENST00000322344 TRBV6-8A0A0A6YYG3 113 aa15.76■□□□□ 0.11
PNKP-201ENST00000322344 SMR3AQ99954 134 aa15.76■□□□□ 0.11
PNKP-201ENST00000322344 PPDPFQ9H3Y8 114 aa15.76■□□□□ 0.11
PNKP-201ENST00000322344 RPL13AP40429 203 aaKnown RBP15.75■□□□□ 0.11
PNKP-201ENST00000322344 LINC00612Q8N6U2 182 aa15.75■□□□□ 0.11
PNKP-201ENST00000322344 TRBV10-2A0A0K0K1G8 114 aa15.74■□□□□ 0.11
PNKP-201ENST00000322344 GAGE6Q13070 117 aa15.74■□□□□ 0.11
PNKP-201ENST00000322344 NF1P21359 2839 aa15.74■□□□□ 0.11
PNKP-201ENST00000322344 MEIG1Q5JSS6 88 aa15.73■□□□□ 0.11
PNKP-201ENST00000322344 LY6G6DO95868 133 aa15.73■□□□□ 0.11
PNKP-201ENST00000322344 SMIM9A6NGZ8 99 aa15.72■□□□□ 0.11
PNKP-201ENST00000322344 CRLF1O75462 422 aa15.72■□□□□ 0.11
PNKP-201ENST00000322344 CHCHD5Q9BSY4 110 aa15.71■□□□□ 0.11
PNKP-201ENST00000322344 CDIP1Q9H305 208 aa15.71■□□□□ 0.11
PNKP-201ENST00000322344 CUBNO60494 3623 aa15.7■□□□□ 0.1
PNKP-201ENST00000322344 DEFB130BP0DP73 79 aa15.69■□□□□ 0.1
PNKP-201ENST00000322344 DEFB130AP0DP74 79 aa15.69■□□□□ 0.1
PNKP-201ENST00000322344 ACANP16112 2415 aa15.69■□□□□ 0.1
PNKP-201ENST00000322344 TMEM262E9PQX1 116 aa15.68■□□□□ 0.1
PNKP-201ENST00000322344 LST1O00453 97 aa15.68■□□□□ 0.1
PNKP-201ENST00000322344 C9orf66Q5T8R8 295 aa15.68■□□□□ 0.1
PNKP-201ENST00000322344 COX7B2Q8TF08 81 aa15.68■□□□□ 0.1
PNKP-201ENST00000322344 IGLV4-60A0A075B6I1 120 aa15.68■□□□□ 0.1
PNKP-201ENST00000322344 A0A0U1RRA0 63 aa15.67■□□□□ 0.1
PNKP-201ENST00000322344 H3BT86 120 aa15.67■□□□□ 0.1
PNKP-201ENST00000322344 SOSTDC1Q6X4U4 206 aa15.67■□□□□ 0.1
PNKP-201ENST00000322344 X6R8D5 127 aa15.67■□□□□ 0.1
PNKP-201ENST00000322344 SETXQ7Z333 2677 aaKnown RBP15.67■□□□□ 0.1
PNKP-201ENST00000322344 NTN5Q8WTR8 489 aaPredicted RBP15.66■□□□□ 0.1
PNKP-201ENST00000322344 C2orf82Q6UX34 121 aa15.65■□□□□ 0.1
PNKP-201ENST00000322344 IGHV3OR16-9A0A0B4J2B5 98 aa15.64■□□□□ 0.09
PNKP-201ENST00000322344 CLEC2BQ92478 149 aa15.64■□□□□ 0.09
PNKP-201ENST00000322344 GYPEP15421 78 aa15.63■□□□□ 0.09
PNKP-201ENST00000322344 A0A087WZ39 114 aa15.62■□□□□ 0.09
PNKP-201ENST00000322344 IGKV3OR2-268A0A0C4DH90 116 aa15.62■□□□□ 0.09
PNKP-201ENST00000322344 PRO0255Q9UI72 69 aa15.62■□□□□ 0.09
PNKP-201ENST00000322344 MTORP42345 2549 aa15.62■□□□□ 0.09
PNKP-201ENST00000322344 LYRM9A8MSI8 78 aa15.61■□□□□ 0.09
PNKP-201ENST00000322344 SHISA2Q6UWI4 295 aa15.61■□□□□ 0.09
PNKP-201ENST00000322344 KMT2BQ9UMN6 2715 aaPredicted RBP15.61■□□□□ 0.09
PNKP-201ENST00000322344 UBE2WQ96B02 151 aa15.61■□□□□ 0.09
PNKP-201ENST00000322344 UNC79Q9P2D8 2635 aa15.61■□□□□ 0.09
PNKP-201ENST00000322344 HIVEP2P31629 2446 aa15.61■□□□□ 0.09
PNKP-201ENST00000322344 COX7A2LO14548 114 aa15.6■□□□□ 0.09
PNKP-201ENST00000322344 JMJD1CQ15652 2540 aa15.6■□□□□ 0.09
PNKP-201ENST00000322344 A0A1B0GUV1 79 aa15.6■□□□□ 0.09
PNKP-201ENST00000322344 TOMM7Q9P0U1 55 aa15.6■□□□□ 0.09
PNKP-201ENST00000322344 NOTCH3Q9UM47 2321 aa15.59■□□□□ 0.09
PNKP-201ENST00000322344 ITPR2Q14571 2701 aa15.59■□□□□ 0.09
PNKP-201ENST00000322344 LINC00959A0A1B0GUT2 108 aa15.59■□□□□ 0.09
PNKP-201ENST00000322344 SETD2Q9BYW2 2564 aaPredicted RBP15.59■□□□□ 0.09
PNKP-201ENST00000322344 FAM222AQ5U5X8 452 aa15.58■□□□□ 0.09
PNKP-201ENST00000322344 XGP55808 180 aa15.57■□□□□ 0.08
PNKP-201ENST00000322344 TRAV13-2A0A0B4J235 113 aa15.56■□□□□ 0.08
PNKP-201ENST00000322344 INAFM1C9JVW0 142 aa15.56■□□□□ 0.08
PNKP-201ENST00000322344 APOC4P55056 127 aa15.56■□□□□ 0.08
PNKP-201ENST00000322344 TEX49A0A1B0GTD5 131 aa15.56■□□□□ 0.08
PNKP-201ENST00000322344 IBA57-AS1B1ANH7 110 aa15.56■□□□□ 0.08
PNKP-201ENST00000322344 MIR7-3HGQ8N6C7 128 aa15.56■□□□□ 0.08
PNKP-201ENST00000322344 MT-ATP8P03928 68 aa15.55■□□□□ 0.08
PNKP-201ENST00000322344 SS18Q15532 418 aa15.55■□□□□ 0.08
PNKP-201ENST00000322344 PAX4O43316 350 aa15.55■□□□□ 0.08
PNKP-201ENST00000322344 C5orf38Q86SI9 138 aa15.54■□□□□ 0.08
PNKP-201ENST00000322344 LINC01561Q8N1V8 128 aa15.53■□□□□ 0.08
PNKP-201ENST00000322344 NIPBLQ6KC79 2804 aaeCLIP15.53■□□□□ 0.08
PNKP-201ENST00000322344 LINC00158P58513 81 aa15.53■□□□□ 0.08
PNKP-201ENST00000322344 SPATA3Q8NHX4 192 aa15.53■□□□□ 0.08
PNKP-201ENST00000322344 TRAV8-4A0A0B4J246 113 aa15.52■□□□□ 0.08
PNKP-201ENST00000322344 CRPP02741 224 aa15.52■□□□□ 0.08
PNKP-201ENST00000322344 SND1-IT1Q9HBX3 110 aa15.51■□□□□ 0.07
PNKP-201ENST00000322344 HELZ2Q9BYK8 2649 aaKnown RBP15.51■□□□□ 0.07
PNKP-201ENST00000322344 TRACP01848 142 aa15.51■□□□□ 0.07
PNKP-201ENST00000322344 DEFB121Q5J5C9 76 aa15.51■□□□□ 0.07
PNKP-201ENST00000322344 DEFB135Q30KP9 77 aa15.5■□□□□ 0.07
PNKP-201ENST00000322344 RPL28P46779 137 aaKnown RBP15.49■□□□□ 0.07
PNKP-201ENST00000322344 C6orf226Q5I0X4 101 aa15.48■□□□□ 0.07
PNKP-201ENST00000322344 CITED1Q99966 193 aa15.48■□□□□ 0.07
PNKP-201ENST00000322344 C2CD3Q4AC94 2353 aa15.48■□□□□ 0.07
PNKP-201ENST00000322344 FASNP49327 2511 aaKnown RBP15.47■□□□□ 0.07
PNKP-201ENST00000322344 IGHV4-28A0A0C4DH34 117 aa15.47■□□□□ 0.07
PNKP-201ENST00000322344 XCL1P47992 114 aa15.47■□□□□ 0.07
PNKP-201ENST00000322344 DAD1P61803 113 aa15.47■□□□□ 0.07
PNKP-201ENST00000322344 Q8IZM0 81 aa15.47■□□□□ 0.07
PNKP-201ENST00000322344 CCL18P55774 89 aa15.46■□□□□ 0.07
PNKP-201ENST00000322344 IGKV2-28A0A075B6P5 120 aa15.46■□□□□ 0.07
PNKP-201ENST00000322344 A0A096LPF7 62 aa15.46■□□□□ 0.07
PNKP-201ENST00000322344 A0A1B0GV72 72 aa15.46■□□□□ 0.07
PNKP-201ENST00000322344 IGKV2D-28P01615 120 aa15.46■□□□□ 0.07
PNKP-201ENST00000322344 MIFP14174 115 aa15.46■□□□□ 0.07
PNKP-201ENST00000322344 LINC00337Q8N6G1 96 aa15.46■□□□□ 0.07
PNKP-201ENST00000322344 TRAV26-1A0A087WT03 109 aa15.45■□□□□ 0.06
PNKP-201ENST00000322344 FAM240AA0A1B0GVK7 77 aa15.44■□□□□ 0.06
PNKP-201ENST00000322344 ATP5G1P05496 136 aa15.43■□□□□ 0.06
PNKP-201ENST00000322344 DEFB4AO15263 64 aa15.43■□□□□ 0.06
PNKP-201ENST00000322344 PFN2P35080 140 aa15.43■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 169.3 ms