RNA–Protein interactions for RNA: ENST00000320672.8

SSBP2-201, Transcript of single stranded DNA binding protein 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSBP2, Length 8,780 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP2-201ENST00000320672 TNRC6AQ8NDV7 1962 aaKnown RBP6.35□□□□□ -1.39
SSBP2-201ENST00000320672 IBA57-AS1B1ANH7 110 aa6.35□□□□□ -1.39
SSBP2-201ENST00000320672 Q8N6K4 173 aa6.35□□□□□ -1.39
SSBP2-201ENST00000320672 LINC00242Q5T6M2 205 aa6.34□□□□□ -1.39
SSBP2-201ENST00000320672 CDC42SE2Q9NRR3 84 aa6.34□□□□□ -1.39
SSBP2-201ENST00000320672 ESRGQ1W209 222 aa6.34□□□□□ -1.39
SSBP2-201ENST00000320672 C7orf33Q8WU49 177 aa6.34□□□□□ -1.39
SSBP2-201ENST00000320672 CD164L2Q6UWJ8 174 aa6.34□□□□□ -1.39
SSBP2-201ENST00000320672 FREM1Q5H8C1 2179 aa6.34□□□□□ -1.39
SSBP2-201ENST00000320672 EBI3Q14213 229 aa6.34□□□□□ -1.4
SSBP2-201ENST00000320672 PRLHP81277 87 aa6.34□□□□□ -1.4
SSBP2-201ENST00000320672 LRRC75A-AS1Q8N1F1 130 aa6.33□□□□□ -1.4
SSBP2-201ENST00000320672 SBSPONQ8IVN8 264 aa6.33□□□□□ -1.4
SSBP2-201ENST00000320672 LINC00574Q9H8X3 128 aa6.33□□□□□ -1.4
SSBP2-201ENST00000320672 ZNF73O43830 326 aaPredicted RBP6.33□□□□□ -1.4
SSBP2-201ENST00000320672 C1orf137Q5JT78 98 aa6.33□□□□□ -1.4
SSBP2-201ENST00000320672 LINC00208Q96KT6 92 aa6.33□□□□□ -1.4
SSBP2-201ENST00000320672 IGLV1-40P01703 118 aa6.32□□□□□ -1.4
SSBP2-201ENST00000320672 POLR2KP53803 58 aaKnown RBP6.32□□□□□ -1.4
SSBP2-201ENST00000320672 U3KQK5 164 aa6.32□□□□□ -1.4
SSBP2-201ENST00000320672 PRO3102Q9H379 93 aa6.32□□□□□ -1.4
SSBP2-201ENST00000320672 ATRXP46100 2492 aa6.32□□□□□ -1.4
SSBP2-201ENST00000320672 COL4A4P53420 1690 aaPredicted RBP6.32□□□□□ -1.4
SSBP2-201ENST00000320672 MUC6Q6W4X9 2439 aa6.32□□□□□ -1.4
SSBP2-201ENST00000320672 A6NED7 52 aa6.32□□□□□ -1.4
SSBP2-201ENST00000320672 M0R378 163 aa6.32□□□□□ -1.4
SSBP2-201ENST00000320672 CHCHD7Q9BUK0 85 aa6.32□□□□□ -1.4
SSBP2-201ENST00000320672 MRGPRG-AS1Q2M3A8 158 aa6.32□□□□□ -1.4
SSBP2-201ENST00000320672 LELP1Q5T871 98 aa6.32□□□□□ -1.4
SSBP2-201ENST00000320672 PYGO1Q9Y3Y4 419 aa6.32□□□□□ -1.4
SSBP2-201ENST00000320672 C2orf16Q68DN1 1984 aa6.32□□□□□ -1.4
SSBP2-201ENST00000320672 TRBV30A0A0K0K1B3 111 aa6.32□□□□□ -1.4
SSBP2-201ENST00000320672 PSPHP1O15172 72 aa6.31□□□□□ -1.4
SSBP2-201ENST00000320672 PRRC2AP48634 2157 aaKnown RBP6.31□□□□□ -1.4
SSBP2-201ENST00000320672 HIVEP3Q5T1R4 2406 aa6.31□□□□□ -1.4
SSBP2-201ENST00000320672 TIMM17BO60830 172 aa6.31□□□□□ -1.4
SSBP2-201ENST00000320672 KLLNB2CW77 178 aa6.31□□□□□ -1.4
SSBP2-201ENST00000320672 PRR14LQ5THK1 2151 aa6.31□□□□□ -1.4
SSBP2-201ENST00000320672 Q6ZVQ6 151 aa6.31□□□□□ -1.4
SSBP2-201ENST00000320672 C14orf177Q52M58 125 aa6.3□□□□□ -1.4
SSBP2-201ENST00000320672 DENND4AQ7Z401 1863 aa6.3□□□□□ -1.4
SSBP2-201ENST00000320672 SMIM9A6NGZ8 99 aa6.3□□□□□ -1.4
SSBP2-201ENST00000320672 TANC1Q9C0D5 1861 aa6.3□□□□□ -1.4
SSBP2-201ENST00000320672 PLXNB3Q9ULL4 1909 aa6.3□□□□□ -1.4
SSBP2-201ENST00000320672 IGLV5-52A0A0A0MRZ9 124 aa6.3□□□□□ -1.4
SSBP2-201ENST00000320672 LINC01547P58512 204 aaPredicted RBP6.3□□□□□ -1.4
SSBP2-201ENST00000320672 FHL2Q14192 279 aa6.3□□□□□ -1.4
SSBP2-201ENST00000320672 ARHGAP32A7KAX9 2087 aa6.3□□□□□ -1.4
SSBP2-201ENST00000320672 LOC107984640A0A0U1RRK4 108 aa6.29□□□□□ -1.4
SSBP2-201ENST00000320672 IGIPA6NJ69 53 aa6.29□□□□□ -1.4
SSBP2-201ENST00000320672 HIVEP2P31629 2446 aa6.29□□□□□ -1.4
SSBP2-201ENST00000320672 SMIM1B2RUZ4 78 aa6.29□□□□□ -1.4
SSBP2-201ENST00000320672 UTRNP46939 3433 aa6.29□□□□□ -1.4
SSBP2-201ENST00000320672 LST1O00453 97 aa6.28□□□□□ -1.4
SSBP2-201ENST00000320672 MED12LQ86YW9 2145 aa6.28□□□□□ -1.4
SSBP2-201ENST00000320672 A0A087WSZ3 146 aa6.28□□□□□ -1.4
SSBP2-201ENST00000320672 CHTF8P0CG12 524 aa6.28□□□□□ -1.4
SSBP2-201ENST00000320672 Q6ZRU5 148 aa6.28□□□□□ -1.4
SSBP2-201ENST00000320672 ODF3Q96PU9 254 aa6.28□□□□□ -1.4
SSBP2-201ENST00000320672 UQCRQO14949 82 aa6.28□□□□□ -1.4
SSBP2-201ENST00000320672 OBSL1O75147 1896 aa6.27□□□□□ -1.41
SSBP2-201ENST00000320672 PRR15LQ9BU68 103 aa6.27□□□□□ -1.41
SSBP2-201ENST00000320672 NUPR2A6NF83 97 aa6.27□□□□□ -1.41
SSBP2-201ENST00000320672 NDUFC2-KCTD14E9PQ53 114 aa6.27□□□□□ -1.41
SSBP2-201ENST00000320672 PCDH15Q96QU1 1955 aa6.26□□□□□ -1.41
SSBP2-201ENST00000320672 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP6.26□□□□□ -1.41
SSBP2-201ENST00000320672 LINC00575Q6W349 94 aa6.26□□□□□ -1.41
SSBP2-201ENST00000320672 PTPN13Q12923 2485 aa6.26□□□□□ -1.41
SSBP2-201ENST00000320672 NTM-AS1Q6ZSK4 140 aa6.26□□□□□ -1.41
SSBP2-201ENST00000320672 FAM19A3Q7Z5A8 133 aa6.26□□□□□ -1.41
SSBP2-201ENST00000320672 C10orf142B7Z368 130 aa6.25□□□□□ -1.41
SSBP2-201ENST00000320672 Q9BRP9 147 aa6.25□□□□□ -1.41
SSBP2-201ENST00000320672 A0A096LNJ9 63 aa6.25□□□□□ -1.41
SSBP2-201ENST00000320672 FAM240AA0A1B0GVK7 77 aa6.24□□□□□ -1.41
SSBP2-201ENST00000320672 CENPFP49454 3210 aa6.24□□□□□ -1.41
SSBP2-201ENST00000320672 C10orf25Q5T742 122 aa6.24□□□□□ -1.41
SSBP2-201ENST00000320672 REG3GQ6UW15 175 aa6.24□□□□□ -1.41
SSBP2-201ENST00000320672 Q8N814 137 aa6.24□□□□□ -1.41
SSBP2-201ENST00000320672 CRYGAP11844 174 aa6.24□□□□□ -1.41
SSBP2-201ENST00000320672 IL17DQ8TAD2 202 aa6.24□□□□□ -1.41
SSBP2-201ENST00000320672 KIAA1549Q9HCM3 1950 aa6.24□□□□□ -1.41
SSBP2-201ENST00000320672 MRPS36P82909 103 aaKnown RBP6.24□□□□□ -1.41
SSBP2-201ENST00000320672 IGLV8-61A0A075B6I0 122 aa6.23□□□□□ -1.41
SSBP2-201ENST00000320672 LYPD5Q6UWN5 251 aa6.23□□□□□ -1.41
SSBP2-201ENST00000320672 FSTL3O95633 263 aa6.23□□□□□ -1.41
SSBP2-201ENST00000320672 SERP1Q9Y6X1 66 aa6.23□□□□□ -1.41
SSBP2-201ENST00000320672 PCNX3Q9H6A9 2034 aa6.23□□□□□ -1.41
SSBP2-201ENST00000320672 NUP210Q8TEM1 1887 aaPredicted RBP6.22□□□□□ -1.41
SSBP2-201ENST00000320672 SERP2Q8N6R1 65 aa6.22□□□□□ -1.41
SSBP2-201ENST00000320672 SPACA4Q8TDM5 124 aa6.22□□□□□ -1.41
SSBP2-201ENST00000320672 TRBV7-6A0A0J9YX20 115 aa6.22□□□□□ -1.41
SSBP2-201ENST00000320672 MRPL55Q7Z7F7 128 aaKnown RBP6.22□□□□□ -1.41
SSBP2-201ENST00000320672 NUP210LQ5VU65 1888 aa6.22□□□□□ -1.41
SSBP2-201ENST00000320672 Q8IZM0 81 aa6.22□□□□□ -1.41
SSBP2-201ENST00000320672 ALPK3Q96L96 1907 aa6.22□□□□□ -1.41
SSBP2-201ENST00000320672 IGKV2D-30A0A075B6S6 120 aa6.22□□□□□ -1.41
SSBP2-201ENST00000320672 IGKV2-30P06310 120 aa6.22□□□□□ -1.41
SSBP2-201ENST00000320672 RPL37AP61513 92 aaKnown RBP6.22□□□□□ -1.41
SSBP2-201ENST00000320672 IGLV1-51P01701 117 aa6.21□□□□□ -1.41
SSBP2-201ENST00000320672 PDE6GP18545 87 aa6.21□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms