RNA–Protein interactions for RNA: ENST00000318801.8

SYNGR1-202, Transcript of synaptogyrin 1, humanhuman

TSL 1 (best) BASIC

Gene SYNGR1, Length 1,361 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGR1-202ENST00000318801 TMEM141Q96I45 108 aa18.62■□□□□ 0.57
SYNGR1-202ENST00000318801 SPACA4Q8TDM5 124 aa18.61■□□□□ 0.57
SYNGR1-202ENST00000318801 CHTF8P0CG12 524 aa18.6■□□□□ 0.57
SYNGR1-202ENST00000318801 C2orf66Q6UXQ4 117 aa18.6■□□□□ 0.57
SYNGR1-202ENST00000318801 PRSS3P2Q8NHM4 247 aa18.6■□□□□ 0.57
SYNGR1-202ENST00000318801 RPL37AP61513 92 aaKnown RBP18.59■□□□□ 0.57
SYNGR1-202ENST00000318801 KIAA1644Q3SXP7 199 aa18.59■□□□□ 0.57
SYNGR1-202ENST00000318801 TEX43Q6ZNM6 134 aa18.59■□□□□ 0.57
SYNGR1-202ENST00000318801 FAM104AQ969W3 186 aa18.59■□□□□ 0.57
SYNGR1-202ENST00000318801 C2orf88Q9BSF0 95 aa18.59■□□□□ 0.57
SYNGR1-202ENST00000318801 IGLV4-69A0A075B6H9 119 aa18.58■□□□□ 0.57
SYNGR1-202ENST00000318801 A0A087WYN8 130 aa18.58■□□□□ 0.57
SYNGR1-202ENST00000318801 TGIF2-C20orf24A0A0A6YYL0 155 aa18.58■□□□□ 0.57
SYNGR1-202ENST00000318801 IGKV2-24A0A0C4DH68 120 aa18.58■□□□□ 0.57
SYNGR1-202ENST00000318801 NDUFA5Q16718 116 aa18.58■□□□□ 0.57
SYNGR1-202ENST00000318801 CAMK2N2Q96S95 79 aa18.58■□□□□ 0.57
SYNGR1-202ENST00000318801 IGLV4-3A0A075B6K6 122 aa18.57■□□□□ 0.56
SYNGR1-202ENST00000318801 MAJINQ3KP22 176 aa18.57■□□□□ 0.56
SYNGR1-202ENST00000318801 OR10D4PQ8NGN7 298 aa18.57■□□□□ 0.56
SYNGR1-202ENST00000318801 C2orf48Q96LS8 159 aa18.57■□□□□ 0.56
SYNGR1-202ENST00000318801 MT-ND6P03923 174 aa18.56■□□□□ 0.56
SYNGR1-202ENST00000318801 NPSP0C0P6 89 aa18.56■□□□□ 0.56
SYNGR1-202ENST00000318801 PAPPA-AS1Q5QFB9 102 aa18.56■□□□□ 0.56
SYNGR1-202ENST00000318801 VCX2Q9H322 139 aa18.56■□□□□ 0.56
SYNGR1-202ENST00000318801 IGHV3OR16-9A0A0B4J2B5 98 aa18.55■□□□□ 0.56
SYNGR1-202ENST00000318801 DMBT1Q9UGM3 2413 aaPredicted RBP18.55■□□□□ 0.56
SYNGR1-202ENST00000318801 SPAG11BQ08648 103 aa18.54■□□□□ 0.56
SYNGR1-202ENST00000318801 PLAC8Q9NZF1 115 aa18.54■□□□□ 0.56
SYNGR1-202ENST00000318801 ORAOV1Q8WV07 137 aa18.53■□□□□ 0.56
SYNGR1-202ENST00000318801 F8WDY8 70 aa18.52■□□□□ 0.55
SYNGR1-202ENST00000318801 APOC3P02656 99 aa18.52■□□□□ 0.55
SYNGR1-202ENST00000318801 C7orf33Q8WU49 177 aa18.52■□□□□ 0.55
SYNGR1-202ENST00000318801 LOC107984640A0A0U1RRK4 108 aa18.51■□□□□ 0.55
SYNGR1-202ENST00000318801 FABP9Q0Z7S8 132 aa18.51■□□□□ 0.55
SYNGR1-202ENST00000318801 STPG4Q8N801 248 aa18.51■□□□□ 0.55
SYNGR1-202ENST00000318801 A0A096LNI7 61 aa18.5■□□□□ 0.55
SYNGR1-202ENST00000318801 LINC01549A6NIU2 74 aa18.5■□□□□ 0.55
SYNGR1-202ENST00000318801 SNAPINO95295 136 aa18.5■□□□□ 0.55
SYNGR1-202ENST00000318801 Q6ZRU5 148 aa18.5■□□□□ 0.55
SYNGR1-202ENST00000318801 SVBPQ8N300 66 aa18.5■□□□□ 0.55
SYNGR1-202ENST00000318801 LINC00242Q5T6M2 205 aa18.49■□□□□ 0.55
SYNGR1-202ENST00000318801 ALKBH7Q9BT30 221 aaPredicted RBP18.49■□□□□ 0.55
SYNGR1-202ENST00000318801 MRPL18Q9H0U6 180 aaKnown RBP18.49■□□□□ 0.55
SYNGR1-202ENST00000318801 IGIPA6NJ69 53 aa18.48■□□□□ 0.55
SYNGR1-202ENST00000318801 A0A087WZ39 114 aa18.47■□□□□ 0.55
SYNGR1-202ENST00000318801 UBE2D1P51668 147 aa18.46■□□□□ 0.55
SYNGR1-202ENST00000318801 KRTAP10-4P60372 401 aaPredicted RBP18.46■□□□□ 0.55
SYNGR1-202ENST00000318801 TOMM6Q96B49 74 aa18.46■□□□□ 0.55
SYNGR1-202ENST00000318801 AMELXQ99217 191 aa18.46■□□□□ 0.55
SYNGR1-202ENST00000318801 J3QL48 77 aa18.45■□□□□ 0.54
SYNGR1-202ENST00000318801 NDUFA1O15239 70 aa18.45■□□□□ 0.54
SYNGR1-202ENST00000318801 SEC11AP67812 179 aa18.45■□□□□ 0.54
SYNGR1-202ENST00000318801 RNF151Q2KHN1 245 aa18.45■□□□□ 0.54
SYNGR1-202ENST00000318801 TIMM17AQ99595 171 aa18.45■□□□□ 0.54
SYNGR1-202ENST00000318801 SMCO4Q9NRQ5 59 aa18.45■□□□□ 0.54
SYNGR1-202ENST00000318801 GAGE2BQ13066 116 aa18.44■□□□□ 0.54
SYNGR1-202ENST00000318801 FA2HQ7L5A8 372 aa18.43■□□□□ 0.54
SYNGR1-202ENST00000318801 ERASQ7Z444 233 aa18.43■□□□□ 0.54
SYNGR1-202ENST00000318801 SCGB3A1Q96QR1 104 aa18.43■□□□□ 0.54
SYNGR1-202ENST00000318801 PTTG1IPP53801 180 aa18.42■□□□□ 0.54
SYNGR1-202ENST00000318801 LINC01561Q8N1V8 128 aa18.42■□□□□ 0.54
SYNGR1-202ENST00000318801 MRPL35Q9NZE8 188 aaKnown RBP18.42■□□□□ 0.54
SYNGR1-202ENST00000318801 TRAPPC1Q9Y5R8 145 aa18.42■□□□□ 0.54
SYNGR1-202ENST00000318801 MYCBP2O75592 4640 aa18.41■□□□□ 0.54
SYNGR1-202ENST00000318801 LINC00173Q6ZV60 143 aa18.4■□□□□ 0.54
SYNGR1-202ENST00000318801 HERVK_113P63121 156 aa18.39■□□□□ 0.53
SYNGR1-202ENST00000318801 RPL18AQ02543 176 aaKnown RBP18.39■□□□□ 0.53
SYNGR1-202ENST00000318801 ZC2HC1BQ5TFG8 222 aa18.39■□□□□ 0.53
SYNGR1-202ENST00000318801 GEMIN7Q9H840 131 aaKnown RBP18.39■□□□□ 0.53
SYNGR1-202ENST00000318801 LINC01546A6NGU7 62 aa18.38■□□□□ 0.53
SYNGR1-202ENST00000318801 KRTAP29-1A8MX34 341 aaPredicted RBP18.37■□□□□ 0.53
SYNGR1-202ENST00000318801 PRSS2P07478 247 aa18.37■□□□□ 0.53
SYNGR1-202ENST00000318801 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP18.36■□□□□ 0.53
SYNGR1-202ENST00000318801 FAM19A3Q7Z5A8 133 aa18.36■□□□□ 0.53
SYNGR1-202ENST00000318801 A0A0J9YXV3 536 aa18.34■□□□□ 0.53
SYNGR1-202ENST00000318801 UNQ6190/PRO20217Q6UXQ8 127 aa18.34■□□□□ 0.53
SYNGR1-202ENST00000318801 PACRGQ96M98 296 aaPredicted RBP18.34■□□□□ 0.53
SYNGR1-202ENST00000318801 OXTP01178 125 aa18.33■□□□□ 0.53
SYNGR1-202ENST00000318801 CKS1BP61024 79 aa18.31■□□□□ 0.52
SYNGR1-202ENST00000318801 C6orf226Q5I0X4 101 aa18.31■□□□□ 0.52
SYNGR1-202ENST00000318801 TRBV30A0A0K0K1B3 111 aa18.3■□□□□ 0.52
SYNGR1-202ENST00000318801 KIAA0087Q14695 138 aa18.3■□□□□ 0.52
SYNGR1-202ENST00000318801 C10orf25Q5T742 122 aa18.3■□□□□ 0.52
SYNGR1-202ENST00000318801 TOMM7Q9P0U1 55 aa18.3■□□□□ 0.52
SYNGR1-202ENST00000318801 RAB5BP61020 215 aa18.29■□□□□ 0.52
SYNGR1-202ENST00000318801 LINC00614P0C842 121 aa18.28■□□□□ 0.52
SYNGR1-202ENST00000318801 TLX1NBP0CAT3 122 aa18.28■□□□□ 0.52
SYNGR1-202ENST00000318801 C6orf48Q9UBA6 75 aa18.28■□□□□ 0.52
SYNGR1-202ENST00000318801 CDKN2A-AS1Q9UH64 79 aa18.28■□□□□ 0.52
SYNGR1-202ENST00000318801 C18orf32Q8TCD1 76 aa18.27■□□□□ 0.51
SYNGR1-202ENST00000318801 PMVKQ15126 192 aa18.26■□□□□ 0.51
SYNGR1-202ENST00000318801 C9orf116Q5BN46 136 aaPredicted RBP18.26■□□□□ 0.51
SYNGR1-202ENST00000318801 Q8IZM0 81 aa18.26■□□□□ 0.51
SYNGR1-202ENST00000318801 LINC00469Q8N7U9 141 aa18.26■□□□□ 0.51
SYNGR1-202ENST00000318801 CST9LQ9H4G1 147 aa18.26■□□□□ 0.51
SYNGR1-202ENST00000318801 TINCRA0A1B0GVN0 87 aa18.25■□□□□ 0.51
SYNGR1-202ENST00000318801 HNRNPA3P51991 378 aaKnown RBP18.25■□□□□ 0.51
SYNGR1-202ENST00000318801 C2orf82Q6UX34 121 aa18.25■□□□□ 0.51
SYNGR1-202ENST00000318801 PRR3P79522 188 aaKnown RBP18.24■□□□□ 0.51
SYNGR1-202ENST00000318801 A0A1W2PNN7 141 aa18.23■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 7.6 ms