RNA–Protein interactions for RNA: ENST00000317968.8

PDLIM5-201, Transcript of PDZ and LIM domain 5, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PDLIM5, Length 6,083 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-201ENST00000317968 HIGD1BQ9P298 99 aa6.16□□□□□ -1.42
PDLIM5-201ENST00000317968 CFAP54Q96N23 3096 aa6.16□□□□□ -1.42
PDLIM5-201ENST00000317968 TINCRA0A1B0GVN0 87 aa6.15□□□□□ -1.42
PDLIM5-201ENST00000317968 UBR5O95071 2799 aaPredicted RBP6.15□□□□□ -1.42
PDLIM5-201ENST00000317968 FAM229AH3BQW9 127 aa6.15□□□□□ -1.42
PDLIM5-201ENST00000317968 BAALCQ8WXS3 180 aa6.15□□□□□ -1.42
PDLIM5-201ENST00000317968 HIST2H2BDQ6DRA6 164 aa6.15□□□□□ -1.43
PDLIM5-201ENST00000317968 CD164L2Q6UWJ8 174 aa6.15□□□□□ -1.43
PDLIM5-201ENST00000317968 UBL5Q9BZL1 73 aa6.15□□□□□ -1.43
PDLIM5-201ENST00000317968 IGKV2D-26A0A0A0MRZ7 120 aa6.15□□□□□ -1.43
PDLIM5-201ENST00000317968 H3BUT2 72 aa6.15□□□□□ -1.43
PDLIM5-201ENST00000317968 Q6ZTC4 211 aa6.15□□□□□ -1.43
PDLIM5-201ENST00000317968 A4D1N5 150 aa6.15□□□□□ -1.43
PDLIM5-201ENST00000317968 TRBV20-1A0A075B6N2 111 aa6.14□□□□□ -1.43
PDLIM5-201ENST00000317968 UBE2D3P61077 147 aa6.14□□□□□ -1.43
PDLIM5-201ENST00000317968 UBE2D2P62837 147 aa6.14□□□□□ -1.43
PDLIM5-201ENST00000317968 A8MZ25 164 aa6.14□□□□□ -1.43
PDLIM5-201ENST00000317968 E9PLD3 99 aa6.14□□□□□ -1.43
PDLIM5-201ENST00000317968 NCR3O14931 201 aa6.14□□□□□ -1.43
PDLIM5-201ENST00000317968 COX7BP24311 80 aa6.14□□□□□ -1.43
PDLIM5-201ENST00000317968 CSDC2Q9Y534 153 aaKnown RBP6.14□□□□□ -1.43
PDLIM5-201ENST00000317968 DMXL1Q9Y485 3027 aa6.14□□□□□ -1.43
PDLIM5-201ENST00000317968 RPL28P46779 137 aaKnown RBP6.13□□□□□ -1.43
PDLIM5-201ENST00000317968 A0A0J9YXV3 536 aa6.13□□□□□ -1.43
PDLIM5-201ENST00000317968 TSHBP01222 138 aa6.13□□□□□ -1.43
PDLIM5-201ENST00000317968 MDFIQ99750 246 aa6.13□□□□□ -1.43
PDLIM5-201ENST00000317968 DMXL2Q8TDJ6 3036 aa6.13□□□□□ -1.43
PDLIM5-201ENST00000317968 LINC00310P59036 64 aa6.12□□□□□ -1.43
PDLIM5-201ENST00000317968 RBX1P62877 108 aa6.12□□□□□ -1.43
PDLIM5-201ENST00000317968 MTURNQ8N3F0 131 aa6.12□□□□□ -1.43
PDLIM5-201ENST00000317968 LINC00315P59091 139 aa6.12□□□□□ -1.43
PDLIM5-201ENST00000317968 FAM19A5Q7Z5A7 132 aaPredicted RBP6.12□□□□□ -1.43
PDLIM5-201ENST00000317968 HIGD2AQ9BW72 106 aa6.12□□□□□ -1.43
PDLIM5-201ENST00000317968 PRO1854Q9UHT4 67 aa6.12□□□□□ -1.43
PDLIM5-201ENST00000317968 LINC00173Q6ZV60 143 aa6.11□□□□□ -1.43
PDLIM5-201ENST00000317968 Q6ZUT4 128 aa6.11□□□□□ -1.43
PDLIM5-201ENST00000317968 hADV29S1A0JD25 119 aa6.11□□□□□ -1.43
PDLIM5-201ENST00000317968 C6orf223Q8N319 242 aa6.11□□□□□ -1.43
PDLIM5-201ENST00000317968 URB1-AS1Q96HZ7 61 aa6.11□□□□□ -1.43
PDLIM5-201ENST00000317968 C19orf73Q9NVV2 129 aa6.11□□□□□ -1.43
PDLIM5-201ENST00000317968 EYSQ5T1H1 3165 aa6.11□□□□□ -1.43
PDLIM5-201ENST00000317968 IGLV4-3A0A075B6K6 122 aa6.11□□□□□ -1.43
PDLIM5-201ENST00000317968 H3BNG1 76 aa6.11□□□□□ -1.43
PDLIM5-201ENST00000317968 RPL39P62891 51 aaKnown RBP6.11□□□□□ -1.43
PDLIM5-201ENST00000317968 GAGE2AQ6NT46 116 aa6.11□□□□□ -1.43
PDLIM5-201ENST00000317968 A0A1B0GV72 72 aa6.1□□□□□ -1.43
PDLIM5-201ENST00000317968 ITPR1Q14643 2758 aa6.1□□□□□ -1.43
PDLIM5-201ENST00000317968 HIST1H4AP62805 103 aaKnown RBP6.1□□□□□ -1.43
PDLIM5-201ENST00000317968 IGIPA6NJ69 53 aa6.09□□□□□ -1.43
PDLIM5-201ENST00000317968 SS18L2Q9UHA2 77 aa6.09□□□□□ -1.43
PDLIM5-201ENST00000317968 TRACP01848 142 aa6.09□□□□□ -1.43
PDLIM5-201ENST00000317968 FHL2Q14192 279 aa6.09□□□□□ -1.43
PDLIM5-201ENST00000317968 MPV17L2Q567V2 206 aa6.09□□□□□ -1.43
PDLIM5-201ENST00000317968 OCIAD2Q56VL3 154 aa6.09□□□□□ -1.43
PDLIM5-201ENST00000317968 FRYLO94915 3013 aa6.09□□□□□ -1.43
PDLIM5-201ENST00000317968 VCANP13611 3396 aa6.09□□□□□ -1.43
PDLIM5-201ENST00000317968 IBA57-AS1B1ANH7 110 aa6.09□□□□□ -1.43
PDLIM5-201ENST00000317968 SPANXDQ9BXN6 97 aa6.09□□□□□ -1.44
PDLIM5-201ENST00000317968 TRBV30A0A0K0K1B3 111 aa6.08□□□□□ -1.44
PDLIM5-201ENST00000317968 PLAC8L1A1L4L8 177 aa6.08□□□□□ -1.44
PDLIM5-201ENST00000317968 PLA2G1BP04054 148 aaKnown RBP6.08□□□□□ -1.44
PDLIM5-201ENST00000317968 LECT2O14960 151 aa6.08□□□□□ -1.44
PDLIM5-201ENST00000317968 PDE6GP18545 87 aa6.08□□□□□ -1.44
PDLIM5-201ENST00000317968 EGFEM1PQ0D2K5 195 aa6.08□□□□□ -1.44
PDLIM5-201ENST00000317968 DHRS4-AS1Q9P1J3 65 aa6.08□□□□□ -1.44
PDLIM5-201ENST00000317968 A0A0J9YXY3 114 aa6.08□□□□□ -1.44
PDLIM5-201ENST00000317968 KRTAP10-3P60369 221 aa6.08□□□□□ -1.44
PDLIM5-201ENST00000317968 M0R378 163 aa6.07□□□□□ -1.44
PDLIM5-201ENST00000317968 REG3GQ6UW15 175 aa6.07□□□□□ -1.44
PDLIM5-201ENST00000317968 MIR7-3HGQ8N6C7 128 aa6.07□□□□□ -1.44
PDLIM5-201ENST00000317968 SPANXB1Q9NS25 103 aaPredicted RBP6.07□□□□□ -1.44
PDLIM5-201ENST00000317968 X6R8D5 127 aa6.07□□□□□ -1.44
PDLIM5-201ENST00000317968 KMT2BQ9UMN6 2715 aaPredicted RBP6.07□□□□□ -1.44
PDLIM5-201ENST00000317968 COX17Q14061 63 aa6.07□□□□□ -1.44
PDLIM5-201ENST00000317968 CSNK1G2-AS1Q8NCQ2 148 aa6.07□□□□□ -1.44
PDLIM5-201ENST00000317968 A0A1B0GUV1 79 aa6.07□□□□□ -1.44
PDLIM5-201ENST00000317968 SBSPONQ8IVN8 264 aa6.07□□□□□ -1.44
PDLIM5-201ENST00000317968 LINC01561Q8N1V8 128 aa6.07□□□□□ -1.44
PDLIM5-201ENST00000317968 TCL1BO95988 128 aa6.07□□□□□ -1.44
PDLIM5-201ENST00000317968 LINC01620Q4KN68 170 aa6.07□□□□□ -1.44
PDLIM5-201ENST00000317968 LINC00959A0A1B0GUT2 108 aa6.06□□□□□ -1.44
PDLIM5-201ENST00000317968 C9JAW5 83 aa6.06□□□□□ -1.44
PDLIM5-201ENST00000317968 ANKRD29Q8N6D5 301 aa6.06□□□□□ -1.44
PDLIM5-201ENST00000317968 CEND1Q8N111 149 aa6.06□□□□□ -1.44
PDLIM5-201ENST00000317968 FRYQ5TBA9 3013 aa6.06□□□□□ -1.44
PDLIM5-201ENST00000317968 LINC00612Q8N6U2 182 aa6.06□□□□□ -1.44
PDLIM5-201ENST00000317968 A0A096LNJ9 63 aa6.06□□□□□ -1.44
PDLIM5-201ENST00000317968 NTN5Q8WTR8 489 aaPredicted RBP6.06□□□□□ -1.44
PDLIM5-201ENST00000317968 AMELXQ99217 191 aa6.06□□□□□ -1.44
PDLIM5-201ENST00000317968 TIMM17BO60830 172 aa6.05□□□□□ -1.44
PDLIM5-201ENST00000317968 ZNF22P17026 224 aaPredicted RBP6.05□□□□□ -1.44
PDLIM5-201ENST00000317968 C16orf90A8MZG2 172 aa6.05□□□□□ -1.44
PDLIM5-201ENST00000317968 GAS8-AS1O95177 125 aa6.05□□□□□ -1.44
PDLIM5-201ENST00000317968 LYPD5Q6UWN5 251 aa6.05□□□□□ -1.44
PDLIM5-201ENST00000317968 LINC00336Q6ZUF6 198 aa6.05□□□□□ -1.44
PDLIM5-201ENST00000317968 SIGMAR1Q99720 223 aa6.05□□□□□ -1.44
PDLIM5-201ENST00000317968 HAMPP81172 84 aa6.05□□□□□ -1.44
PDLIM5-201ENST00000317968 JMJD7-PLA2G4BH0Y9G9 81 aa6.04□□□□□ -1.44
PDLIM5-201ENST00000317968 CFC1BP0CG36 223 aa6.04□□□□□ -1.44
PDLIM5-201ENST00000317968 CFC1P0CG37 223 aa6.04□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 105 ms