RNA–Protein interactions for RNA: ENST00000316097.12

SCAMP4-201, Transcript of secretory carrier membrane protein 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCAMP4, Length 2,684 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-201ENST00000316097 VWFP04275 2813 aa12.36□□□□□ -0.43
SCAMP4-201ENST00000316097 F8P00451 2351 aa12.36□□□□□ -0.43
SCAMP4-201ENST00000316097 FAM236AA0A1B0GUQ0 79 aa12.35□□□□□ -0.43
SCAMP4-201ENST00000316097 FAM236BA0A1B0GV22 79 aa12.35□□□□□ -0.43
SCAMP4-201ENST00000316097 ZNF625Q96I27 306 aaPredicted RBP12.35□□□□□ -0.43
SCAMP4-201ENST00000316097 NDUFA1O15239 70 aa12.34□□□□□ -0.43
SCAMP4-201ENST00000316097 RBMY1BA6NDE4 496 aaKnown RBP12.34□□□□□ -0.43
SCAMP4-201ENST00000316097 RBMY1EA6NEQ0 496 aaKnown RBP12.34□□□□□ -0.43
SCAMP4-201ENST00000316097 RBMY1DP0C7P1 496 aaKnown RBP12.34□□□□□ -0.43
SCAMP4-201ENST00000316097 MAP6D1Q9H9H5 199 aa12.34□□□□□ -0.43
SCAMP4-201ENST00000316097 NDUFA7O95182 113 aa12.34□□□□□ -0.43
SCAMP4-201ENST00000316097 CIRBPQ14011 172 aaKnown RBP12.34□□□□□ -0.43
SCAMP4-201ENST00000316097 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP12.34□□□□□ -0.43
SCAMP4-201ENST00000316097 LINC00308Q8TCZ7 52 aa12.33□□□□□ -0.44
SCAMP4-201ENST00000316097 Q9H8V8 135 aa12.33□□□□□ -0.44
SCAMP4-201ENST00000316097 CFAP161Q6P656 301 aa12.32□□□□□ -0.44
SCAMP4-201ENST00000316097 TEP1Q99973 2627 aaKnown RBP12.32□□□□□ -0.44
SCAMP4-201ENST00000316097 COX7A2LO14548 114 aa12.32□□□□□ -0.44
SCAMP4-201ENST00000316097 LINC01587Q99440 93 aa12.32□□□□□ -0.44
SCAMP4-201ENST00000316097 NOTCH3Q9UM47 2321 aa12.31□□□□□ -0.44
SCAMP4-201ENST00000316097 COX6A2Q02221 97 aa12.31□□□□□ -0.44
SCAMP4-201ENST00000316097 SMCR5Q8TEV8 140 aa12.31□□□□□ -0.44
SCAMP4-201ENST00000316097 ACYP1P07311 99 aa12.31□□□□□ -0.44
SCAMP4-201ENST00000316097 NACAE9PAV3 2078 aa12.31□□□□□ -0.44
SCAMP4-201ENST00000316097 ATRQ13535 2644 aa12.3□□□□□ -0.44
SCAMP4-201ENST00000316097 ODF3L2Q3SX64 289 aa12.3□□□□□ -0.44
SCAMP4-201ENST00000316097 DGAT2L7PQ6IED9 249 aa12.3□□□□□ -0.44
SCAMP4-201ENST00000316097 SPATA3Q8NHX4 192 aa12.3□□□□□ -0.44
SCAMP4-201ENST00000316097 TIRAPP58753 221 aa12.29□□□□□ -0.44
SCAMP4-201ENST00000316097 DAZ2Q13117 558 aaKnown RBP12.29□□□□□ -0.44
SCAMP4-201ENST00000316097 DAZ4Q86SG3 579 aaKnown RBP12.29□□□□□ -0.44
SCAMP4-201ENST00000316097 WFDC10AQ9H1F0 79 aa12.29□□□□□ -0.44
SCAMP4-201ENST00000316097 DAZ3Q9NR90 486 aaKnown RBP12.29□□□□□ -0.44
SCAMP4-201ENST00000316097 IGLV5-45A0A087WSX0 123 aa12.28□□□□□ -0.44
SCAMP4-201ENST00000316097 CYSRT1A8MQ03 144 aa12.28□□□□□ -0.44
SCAMP4-201ENST00000316097 SOSTDC1Q6X4U4 206 aa12.28□□□□□ -0.44
SCAMP4-201ENST00000316097 IMUPQ9GZP8 106 aa12.28□□□□□ -0.44
SCAMP4-201ENST00000316097 ZNF415Q09FC8 603 aa12.27□□□□□ -0.44
SCAMP4-201ENST00000316097 TMEM126AQ9H061 195 aa12.27□□□□□ -0.44
SCAMP4-201ENST00000316097 IGHV3OR16-12A0A075B7B8 117 aa12.27□□□□□ -0.45
SCAMP4-201ENST00000316097 TRRAPQ9Y4A5 3859 aa12.26□□□□□ -0.45
SCAMP4-201ENST00000316097 LINC00643Q86TS7 51 aa12.26□□□□□ -0.45
SCAMP4-201ENST00000316097 IGLV5-39A0A0G2JS06 123 aa12.25□□□□□ -0.45
SCAMP4-201ENST00000316097 BAHCC1Q9P281 2608 aa12.25□□□□□ -0.45
SCAMP4-201ENST00000316097 IGHV3-53P01767 116 aa12.25□□□□□ -0.45
SCAMP4-201ENST00000316097 BAALC-AS2P0C853 105 aa12.25□□□□□ -0.45
SCAMP4-201ENST00000316097 LINC00242Q5T6M2 205 aa12.25□□□□□ -0.45
SCAMP4-201ENST00000316097 XCL2Q9UBD3 114 aa12.25□□□□□ -0.45
SCAMP4-201ENST00000316097 HERVK_113P63121 156 aa12.24□□□□□ -0.45
SCAMP4-201ENST00000316097 PF4P02776 101 aa12.24□□□□□ -0.45
SCAMP4-201ENST00000316097 C9orf153Q5TBE3 101 aa12.24□□□□□ -0.45
SCAMP4-201ENST00000316097 BEAN1Q3B7T3 259 aa12.24□□□□□ -0.45
SCAMP4-201ENST00000316097 PRIMA1Q86XR5 153 aa12.24□□□□□ -0.45
SCAMP4-201ENST00000316097 DNAJC30Q96LL9 226 aa12.24□□□□□ -0.45
SCAMP4-201ENST00000316097 FAM218AQ96MZ4 157 aa12.23□□□□□ -0.45
SCAMP4-201ENST00000316097 SMIM1B2RUZ4 78 aa12.23□□□□□ -0.45
SCAMP4-201ENST00000316097 TRACP01848 142 aa12.23□□□□□ -0.45
SCAMP4-201ENST00000316097 TRAV13-1A0A0B4J241 112 aa12.22□□□□□ -0.45
SCAMP4-201ENST00000316097 IGLV1-51P01701 117 aa12.22□□□□□ -0.45
SCAMP4-201ENST00000316097 TRAV25A0A0B4J276 109 aa12.22□□□□□ -0.45
SCAMP4-201ENST00000316097 STHQ8IWL8 128 aa12.22□□□□□ -0.45
SCAMP4-201ENST00000316097 COPS9Q8WXC6 57 aa12.22□□□□□ -0.45
SCAMP4-201ENST00000316097 LINC00694P0DN24 101 aa12.21□□□□□ -0.45
SCAMP4-201ENST00000316097 PIK3CD-AS1Q5SR53 167 aa12.21□□□□□ -0.45
SCAMP4-201ENST00000316097 C3orf22Q8N5N4 141 aa12.21□□□□□ -0.45
SCAMP4-201ENST00000316097 C22orf24Q9Y442 160 aa12.21□□□□□ -0.45
SCAMP4-201ENST00000316097 C11orf72Q8NBR9 251 aa12.2□□□□□ -0.46
SCAMP4-201ENST00000316097 A8MTW9 85 aa12.2□□□□□ -0.46
SCAMP4-201ENST00000316097 GAGE2AQ6NT46 116 aa12.2□□□□□ -0.46
SCAMP4-201ENST00000316097 PPDPFQ9H3Y8 114 aa12.2□□□□□ -0.46
SCAMP4-201ENST00000316097 Q9HAA7 133 aa12.2□□□□□ -0.46
SCAMP4-201ENST00000316097 LINC00482Q8N8I6 264 aa12.19□□□□□ -0.46
SCAMP4-201ENST00000316097 RPL35AP18077 110 aaKnown RBP12.18□□□□□ -0.46
SCAMP4-201ENST00000316097 UQCRQO14949 82 aa12.18□□□□□ -0.46
SCAMP4-201ENST00000316097 SDIM1Q6ZPB5 146 aa12.18□□□□□ -0.46
SCAMP4-201ENST00000316097 FBN1P35555 2871 aaKnown RBP12.18□□□□□ -0.46
SCAMP4-201ENST00000316097 RS1O15537 224 aa12.17□□□□□ -0.46
SCAMP4-201ENST00000316097 INAFM2P0DMQ5 153 aa12.16□□□□□ -0.46
SCAMP4-201ENST00000316097 C19orf73Q9NVV2 129 aa12.16□□□□□ -0.46
SCAMP4-201ENST00000316097 FAM222AQ5U5X8 452 aa12.15□□□□□ -0.46
SCAMP4-201ENST00000316097 C5orf38Q86SI9 138 aa12.15□□□□□ -0.46
SCAMP4-201ENST00000316097 C1orf158Q8N1D5 194 aa12.15□□□□□ -0.46
SCAMP4-201ENST00000316097 LINC00526Q96FQ7 95 aa12.15□□□□□ -0.46
SCAMP4-201ENST00000316097 KLK5Q9Y337 293 aaPredicted RBP12.15□□□□□ -0.46
SCAMP4-201ENST00000316097 MALP21145 153 aa12.14□□□□□ -0.47
SCAMP4-201ENST00000316097 CXCL5P42830 114 aa12.14□□□□□ -0.47
SCAMP4-201ENST00000316097 F5H768 121 aa12.14□□□□□ -0.47
SCAMP4-201ENST00000316097 INSP01308 110 aa12.14□□□□□ -0.47
SCAMP4-201ENST00000316097 ATP5G1P05496 136 aa12.14□□□□□ -0.47
SCAMP4-201ENST00000316097 GIG44P09565 113 aaPredicted RBP12.13□□□□□ -0.47
SCAMP4-201ENST00000316097 FAM19A3Q7Z5A8 133 aa12.13□□□□□ -0.47
SCAMP4-201ENST00000316097 NBEAL2Q6ZNJ1 2754 aa12.13□□□□□ -0.47
SCAMP4-201ENST00000316097 CRPP02741 224 aa12.13□□□□□ -0.47
SCAMP4-201ENST00000316097 NTM-AS1Q6ZSK4 140 aa12.13□□□□□ -0.47
SCAMP4-201ENST00000316097 TRGV1A0A0A0MS02 117 aa12.12□□□□□ -0.47
SCAMP4-201ENST00000316097 TRAV13-2A0A0B4J235 113 aa12.11□□□□□ -0.47
SCAMP4-201ENST00000316097 COX7CP15954 63 aa12.11□□□□□ -0.47
SCAMP4-201ENST00000316097 RPL28P46779 137 aaKnown RBP12.11□□□□□ -0.47
SCAMP4-201ENST00000316097 LINC00337Q8N6G1 96 aa12.11□□□□□ -0.47
SCAMP4-201ENST00000316097 CDC42SE2Q9NRR3 84 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 65 ms