RNA–Protein interactions for RNA: ENST00000311008.15

SPNS1-201, Transcript of sphingolipid transporter 1 (putative), humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPNS1, Length 2,208 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPNS1-201ENST00000311008 PPDPFQ9H3Y8 114 aa13.84□□□□□ -0.19
SPNS1-201ENST00000311008 ZNF625Q96I27 306 aaPredicted RBP13.84□□□□□ -0.19
SPNS1-201ENST00000311008 TMEM262E9PQX1 116 aa13.83□□□□□ -0.2
SPNS1-201ENST00000311008 FHL2Q14192 279 aa13.83□□□□□ -0.2
SPNS1-201ENST00000311008 PRIMA1Q86XR5 153 aa13.83□□□□□ -0.2
SPNS1-201ENST00000311008 RPL13AP40429 203 aaKnown RBP13.83□□□□□ -0.2
SPNS1-201ENST00000311008 CDIP1Q9H305 208 aa13.83□□□□□ -0.2
SPNS1-201ENST00000311008 NBPF19A0A087WUL8 3843 aa13.82□□□□□ -0.2
SPNS1-201ENST00000311008 PF4P02776 101 aa13.82□□□□□ -0.2
SPNS1-201ENST00000311008 SHISA2Q6UWI4 295 aa13.82□□□□□ -0.2
SPNS1-201ENST00000311008 DAND5Q8N907 189 aa13.82□□□□□ -0.2
SPNS1-201ENST00000311008 LOC100131303A0A0U1RQF7 123 aa13.82□□□□□ -0.2
SPNS1-201ENST00000311008 KIR2DL5BQ8NHK3 375 aa13.82□□□□□ -0.2
SPNS1-201ENST00000311008 PDZD2O15018 2839 aa13.81□□□□□ -0.2
SPNS1-201ENST00000311008 TRBV6-8A0A0A6YYG3 113 aa13.81□□□□□ -0.2
SPNS1-201ENST00000311008 MEIG1Q5JSS6 88 aa13.8□□□□□ -0.2
SPNS1-201ENST00000311008 NF1P21359 2839 aa13.79□□□□□ -0.2
SPNS1-201ENST00000311008 H3BT86 120 aa13.79□□□□□ -0.2
SPNS1-201ENST00000311008 LINC00482Q8N8I6 264 aa13.79□□□□□ -0.2
SPNS1-201ENST00000311008 LST1O00453 97 aa13.78□□□□□ -0.2
SPNS1-201ENST00000311008 GAGE6Q13070 117 aa13.78□□□□□ -0.2
SPNS1-201ENST00000311008 LINC00612Q8N6U2 182 aa13.78□□□□□ -0.2
SPNS1-201ENST00000311008 HELZ2Q9BYK8 2649 aaKnown RBP13.77□□□□□ -0.2
SPNS1-201ENST00000311008 NTN5Q8WTR8 489 aaPredicted RBP13.76□□□□□ -0.21
SPNS1-201ENST00000311008 SMIM9A6NGZ8 99 aa13.76□□□□□ -0.21
SPNS1-201ENST00000311008 CHCHD5Q9BSY4 110 aa13.76□□□□□ -0.21
SPNS1-201ENST00000311008 C2orf82Q6UX34 121 aa13.75□□□□□ -0.21
SPNS1-201ENST00000311008 KRTAP10-3P60369 221 aa13.75□□□□□ -0.21
SPNS1-201ENST00000311008 COX7B2Q8TF08 81 aa13.75□□□□□ -0.21
SPNS1-201ENST00000311008 ANK3Q12955 4377 aaKnown RBP13.75□□□□□ -0.21
SPNS1-201ENST00000311008 A0A0U1RRA0 63 aa13.74□□□□□ -0.21
SPNS1-201ENST00000311008 CRLF1O75462 422 aa13.74□□□□□ -0.21
SPNS1-201ENST00000311008 SOSTDC1Q6X4U4 206 aa13.74□□□□□ -0.21
SPNS1-201ENST00000311008 CLEC2BQ92478 149 aa13.73□□□□□ -0.21
SPNS1-201ENST00000311008 DEFB130BP0DP73 79 aa13.72□□□□□ -0.21
SPNS1-201ENST00000311008 DEFB130AP0DP74 79 aa13.72□□□□□ -0.21
SPNS1-201ENST00000311008 UBE2WQ96B02 151 aa13.72□□□□□ -0.21
SPNS1-201ENST00000311008 IGLV4-60A0A075B6I1 120 aa13.72□□□□□ -0.21
SPNS1-201ENST00000311008 ACANP16112 2415 aa13.72□□□□□ -0.21
SPNS1-201ENST00000311008 CUBNO60494 3623 aa13.71□□□□□ -0.21
SPNS1-201ENST00000311008 IGHV3OR16-9A0A0B4J2B5 98 aa13.71□□□□□ -0.21
SPNS1-201ENST00000311008 COX7A2LO14548 114 aa13.71□□□□□ -0.22
SPNS1-201ENST00000311008 SMR3AQ99954 134 aa13.71□□□□□ -0.22
SPNS1-201ENST00000311008 SETXQ7Z333 2677 aaKnown RBP13.71□□□□□ -0.22
SPNS1-201ENST00000311008 XGP55808 180 aa13.7□□□□□ -0.22
SPNS1-201ENST00000311008 C9orf66Q5T8R8 295 aa13.7□□□□□ -0.22
SPNS1-201ENST00000311008 A0A087WZ39 114 aa13.7□□□□□ -0.22
SPNS1-201ENST00000311008 LY6G6DO95868 133 aa13.69□□□□□ -0.22
SPNS1-201ENST00000311008 X6R8D5 127 aa13.69□□□□□ -0.22
SPNS1-201ENST00000311008 TEX49A0A1B0GTD5 131 aa13.68□□□□□ -0.22
SPNS1-201ENST00000311008 MT-ATP8P03928 68 aa13.68□□□□□ -0.22
SPNS1-201ENST00000311008 GYPEP15421 78 aa13.68□□□□□ -0.22
SPNS1-201ENST00000311008 FAM222AQ5U5X8 452 aa13.68□□□□□ -0.22
SPNS1-201ENST00000311008 NOTCH3Q9UM47 2321 aa13.68□□□□□ -0.22
SPNS1-201ENST00000311008 TRAV13-2A0A0B4J235 113 aa13.68□□□□□ -0.22
SPNS1-201ENST00000311008 IGKV3OR2-268A0A0C4DH90 116 aa13.68□□□□□ -0.22
SPNS1-201ENST00000311008 PRO0255Q9UI72 69 aa13.68□□□□□ -0.22
SPNS1-201ENST00000311008 A0A1B0GUV1 79 aa13.67□□□□□ -0.22
SPNS1-201ENST00000311008 TOMM7Q9P0U1 55 aa13.67□□□□□ -0.22
SPNS1-201ENST00000311008 SS18L2Q9UHA2 77 aa13.67□□□□□ -0.22
SPNS1-201ENST00000311008 JMJD1CQ15652 2540 aa13.67□□□□□ -0.22
SPNS1-201ENST00000311008 MTORP42345 2549 aa13.67□□□□□ -0.22
SPNS1-201ENST00000311008 SETD2Q9BYW2 2564 aaPredicted RBP13.67□□□□□ -0.22
SPNS1-201ENST00000311008 LYRM9A8MSI8 78 aa13.67□□□□□ -0.22
SPNS1-201ENST00000311008 TRAV8-4A0A0B4J246 113 aa13.66□□□□□ -0.22
SPNS1-201ENST00000311008 LINC00959A0A1B0GUT2 108 aa13.66□□□□□ -0.22
SPNS1-201ENST00000311008 IBA57-AS1B1ANH7 110 aa13.66□□□□□ -0.22
SPNS1-201ENST00000311008 HIVEP2P31629 2446 aa13.65□□□□□ -0.22
SPNS1-201ENST00000311008 MIR7-3HGQ8N6C7 128 aa13.64□□□□□ -0.23
SPNS1-201ENST00000311008 UNC79Q9P2D8 2635 aa13.64□□□□□ -0.23
SPNS1-201ENST00000311008 ITPR2Q14571 2701 aa13.64□□□□□ -0.23
SPNS1-201ENST00000311008 DEFB121Q5J5C9 76 aa13.64□□□□□ -0.23
SPNS1-201ENST00000311008 TRACP01848 142 aa13.63□□□□□ -0.23
SPNS1-201ENST00000311008 SS18Q15532 418 aa13.63□□□□□ -0.23
SPNS1-201ENST00000311008 CRPP02741 224 aa13.63□□□□□ -0.23
SPNS1-201ENST00000311008 LINC00158P58513 81 aa13.62□□□□□ -0.23
SPNS1-201ENST00000311008 LINC01561Q8N1V8 128 aa13.62□□□□□ -0.23
SPNS1-201ENST00000311008 SND1-IT1Q9HBX3 110 aa13.62□□□□□ -0.23
SPNS1-201ENST00000311008 C2CD3Q4AC94 2353 aa13.61□□□□□ -0.23
SPNS1-201ENST00000311008 APOC4P55056 127 aa13.61□□□□□ -0.23
SPNS1-201ENST00000311008 C5orf38Q86SI9 138 aa13.61□□□□□ -0.23
SPNS1-201ENST00000311008 FAM240AA0A1B0GVK7 77 aa13.6□□□□□ -0.23
SPNS1-201ENST00000311008 PAX4O43316 350 aa13.6□□□□□ -0.23
SPNS1-201ENST00000311008 RPL28P46779 137 aaKnown RBP13.6□□□□□ -0.23
SPNS1-201ENST00000311008 GCN1Q92616 2671 aaKnown RBP13.59□□□□□ -0.23
SPNS1-201ENST00000311008 NIPBLQ6KC79 2804 aaeCLIP13.59□□□□□ -0.23
SPNS1-201ENST00000311008 SNCGO76070 127 aa13.58□□□□□ -0.24
SPNS1-201ENST00000311008 C6orf226Q5I0X4 101 aa13.58□□□□□ -0.24
SPNS1-201ENST00000311008 MRPL23Q16540 153 aaKnown RBP13.56□□□□□ -0.24
SPNS1-201ENST00000311008 Q8IZM0 81 aa13.56□□□□□ -0.24
SPNS1-201ENST00000311008 CITED1Q99966 193 aa13.56□□□□□ -0.24
SPNS1-201ENST00000311008 IGKV2-28A0A075B6P5 120 aa13.56□□□□□ -0.24
SPNS1-201ENST00000311008 IGKV2D-28P01615 120 aa13.56□□□□□ -0.24
SPNS1-201ENST00000311008 CCL18P55774 89 aa13.56□□□□□ -0.24
SPNS1-201ENST00000311008 INAFM1C9JVW0 142 aa13.55□□□□□ -0.24
SPNS1-201ENST00000311008 XCL1P47992 114 aa13.55□□□□□ -0.24
SPNS1-201ENST00000311008 LINC00337Q8N6G1 96 aa13.55□□□□□ -0.24
SPNS1-201ENST00000311008 ANAPC13Q9BS18 74 aa13.55□□□□□ -0.24
SPNS1-201ENST00000311008 DEFB135Q30KP9 77 aa13.54□□□□□ -0.24
SPNS1-201ENST00000311008 DAD1P61803 113 aa13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 81.3 ms