RNA–Protein interactions for RNA: ENST00000310645.9

COL6A2-202, Transcript of collagen type VI alpha 2 chain, humanhuman

TSL 5 BASIC

Gene COL6A2, Length 3,446 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2-202ENST00000310645 B4DSR2 109 aa10.47□□□□□ -0.73
COL6A2-202ENST00000310645 UBE2L6O14933 153 aa10.47□□□□□ -0.73
COL6A2-202ENST00000310645 INSP01308 110 aa10.47□□□□□ -0.73
COL6A2-202ENST00000310645 PFN2P35080 140 aa10.47□□□□□ -0.73
COL6A2-202ENST00000310645 MAP6D1Q9H9H5 199 aa10.47□□□□□ -0.73
COL6A2-202ENST00000310645 F5H768 121 aa10.46□□□□□ -0.73
COL6A2-202ENST00000310645 CXCL5P42830 114 aa10.46□□□□□ -0.73
COL6A2-202ENST00000310645 RNF152Q8N8N0 203 aa10.46□□□□□ -0.73
COL6A2-202ENST00000310645 SMIM11BQ8TCY0 68 aa10.46□□□□□ -0.73
COL6A2-202ENST00000310645 CYSTM1Q9H1C7 97 aa10.46□□□□□ -0.73
COL6A2-202ENST00000310645 CDC42SE2Q9NRR3 84 aa10.46□□□□□ -0.73
COL6A2-202ENST00000310645 CSDC2Q9Y534 153 aaKnown RBP10.46□□□□□ -0.73
COL6A2-202ENST00000310645 NCR3O14931 201 aa10.46□□□□□ -0.74
COL6A2-202ENST00000310645 FAM222AQ5U5X8 452 aa10.46□□□□□ -0.74
COL6A2-202ENST00000310645 Q6ZTI0 123 aa10.46□□□□□ -0.74
COL6A2-202ENST00000310645 LECT2O14960 151 aa10.45□□□□□ -0.74
COL6A2-202ENST00000310645 C11orf68Q9H3H3 251 aaKnown RBP10.45□□□□□ -0.74
COL6A2-202ENST00000310645 PRORYQ9H606 182 aa10.45□□□□□ -0.74
COL6A2-202ENST00000310645 CHD6Q8TD26 2715 aa10.45□□□□□ -0.74
COL6A2-202ENST00000310645 ATOX1O00244 68 aa10.45□□□□□ -0.74
COL6A2-202ENST00000310645 FAM19A5Q7Z5A7 132 aaPredicted RBP10.45□□□□□ -0.74
COL6A2-202ENST00000310645 C2orf48Q96LS8 159 aa10.45□□□□□ -0.74
COL6A2-202ENST00000310645 IGKV2-28A0A075B6P5 120 aa10.45□□□□□ -0.74
COL6A2-202ENST00000310645 IGKV2D-28P01615 120 aa10.45□□□□□ -0.74
COL6A2-202ENST00000310645 RPL28P46779 137 aaKnown RBP10.45□□□□□ -0.74
COL6A2-202ENST00000310645 LINC00846Q9NV44 126 aa10.45□□□□□ -0.74
COL6A2-202ENST00000310645 SONP18583 2426 aaKnown RBP10.44□□□□□ -0.74
COL6A2-202ENST00000310645 J3KT08 172 aa10.44□□□□□ -0.74
COL6A2-202ENST00000310645 LRRK2Q5S007 2527 aa10.44□□□□□ -0.74
COL6A2-202ENST00000310645 PKD1L2Q7Z442 2459 aa10.44□□□□□ -0.74
COL6A2-202ENST00000310645 MXRA5Q9NR99 2828 aa10.44□□□□□ -0.74
COL6A2-202ENST00000310645 PAX4O43316 350 aa10.43□□□□□ -0.74
COL6A2-202ENST00000310645 COX7B2Q8TF08 81 aa10.43□□□□□ -0.74
COL6A2-202ENST00000310645 UTP20O75691 2785 aaKnown RBP10.43□□□□□ -0.74
COL6A2-202ENST00000310645 K7EQD1 137 aa10.43□□□□□ -0.74
COL6A2-202ENST00000310645 FLNCQ14315 2725 aa10.42□□□□□ -0.74
COL6A2-202ENST00000310645 HIST1H4AP62805 103 aaKnown RBP10.42□□□□□ -0.74
COL6A2-202ENST00000310645 CCDC168Q8NDH2 2452 aa10.42□□□□□ -0.74
COL6A2-202ENST00000310645 LOC100131303A0A0U1RQF7 123 aa10.42□□□□□ -0.74
COL6A2-202ENST00000310645 RPL18AQ02543 176 aaKnown RBP10.42□□□□□ -0.74
COL6A2-202ENST00000310645 KIR2DL5BQ8NHK3 375 aa10.42□□□□□ -0.74
COL6A2-202ENST00000310645 EPG5Q9HCE0 2579 aa10.41□□□□□ -0.74
COL6A2-202ENST00000310645 CCL18P55774 89 aa10.41□□□□□ -0.74
COL6A2-202ENST00000310645 TMEM243Q9BU79 118 aa10.41□□□□□ -0.74
COL6A2-202ENST00000310645 FN1P02751 2386 aaKnown RBP10.41□□□□□ -0.74
COL6A2-202ENST00000310645 ANKRD17O75179 2603 aaKnown RBP10.41□□□□□ -0.74
COL6A2-202ENST00000310645 STHQ8IWL8 128 aa10.4□□□□□ -0.74
COL6A2-202ENST00000310645 PF4P02776 101 aa10.4□□□□□ -0.74
COL6A2-202ENST00000310645 CRYGAP11844 174 aa10.4□□□□□ -0.74
COL6A2-202ENST00000310645 C11orf44Q8N8P7 122 aa10.4□□□□□ -0.74
COL6A2-202ENST00000310645 ZNF702PQ9H963 129 aa10.4□□□□□ -0.74
COL6A2-202ENST00000310645 NOP10Q9NPE3 64 aaKnown RBP10.4□□□□□ -0.74
COL6A2-202ENST00000310645 FBN2P35556 2912 aa10.4□□□□□ -0.74
COL6A2-202ENST00000310645 ABCA12Q86UK0 2595 aa10.4□□□□□ -0.74
COL6A2-202ENST00000310645 LRRC75A-AS1Q8N1F1 130 aa10.4□□□□□ -0.75
COL6A2-202ENST00000310645 C1orf158Q8N1D5 194 aa10.39□□□□□ -0.75
COL6A2-202ENST00000310645 NAV2Q8IVL1 2488 aa10.39□□□□□ -0.75
COL6A2-202ENST00000310645 A8MTW9 85 aa10.39□□□□□ -0.75
COL6A2-202ENST00000310645 WFDC9Q8NEX5 89 aa10.38□□□□□ -0.75
COL6A2-202ENST00000310645 DSCR8Q96T75 97 aa10.38□□□□□ -0.75
COL6A2-202ENST00000310645 RNASE1P07998 156 aaKnown RBP10.38□□□□□ -0.75
COL6A2-202ENST00000310645 TRGV2A0A075B6R0 118 aa10.38□□□□□ -0.75
COL6A2-202ENST00000310645 SMIM9A6NGZ8 99 aa10.37□□□□□ -0.75
COL6A2-202ENST00000310645 USP17L23D6RBM5 183 aa10.37□□□□□ -0.75
COL6A2-202ENST00000310645 DEFB114Q30KQ6 69 aa10.37□□□□□ -0.75
COL6A2-202ENST00000310645 OVOL2Q9BRP0 275 aa10.37□□□□□ -0.75
COL6A2-202ENST00000310645 H0YGX0 51 aa10.36□□□□□ -0.75
COL6A2-202ENST00000310645 FAM19A3Q7Z5A8 133 aa10.36□□□□□ -0.75
COL6A2-202ENST00000310645 LINC01561Q8N1V8 128 aa10.36□□□□□ -0.75
COL6A2-202ENST00000310645 SERP2Q8N6R1 65 aa10.36□□□□□ -0.75
COL6A2-202ENST00000310645 IGLV4-60A0A075B6I1 120 aa10.36□□□□□ -0.75
COL6A2-202ENST00000310645 TRBV10-1A0A0K0K1A3 114 aa10.36□□□□□ -0.75
COL6A2-202ENST00000310645 A0A1W2PRX2 142 aa10.36□□□□□ -0.75
COL6A2-202ENST00000310645 HILS1P60008 231 aa10.35□□□□□ -0.75
COL6A2-202ENST00000310645 ODF3L2Q3SX64 289 aa10.35□□□□□ -0.75
COL6A2-202ENST00000310645 Q6JHZ5 121 aa10.35□□□□□ -0.75
COL6A2-202ENST00000310645 PLA2G2AP14555 144 aa10.35□□□□□ -0.75
COL6A2-202ENST00000310645 LINC01356Q8N9X3 169 aa10.35□□□□□ -0.75
COL6A2-202ENST00000310645 TEX15Q9BXT5 2789 aa10.34□□□□□ -0.75
COL6A2-202ENST00000310645 C5orf47Q569G3 176 aa10.33□□□□□ -0.76
COL6A2-202ENST00000310645 C6orf226Q5I0X4 101 aa10.33□□□□□ -0.76
COL6A2-202ENST00000310645 DOPEY1Q5JWR5 2465 aa10.33□□□□□ -0.76
COL6A2-202ENST00000310645 PRR3P79522 188 aaKnown RBP10.33□□□□□ -0.76
COL6A2-202ENST00000310645 TRGV4A0A0C4DH28 118 aa10.32□□□□□ -0.76
COL6A2-202ENST00000310645 ORMDL1Q9P0S3 153 aa10.32□□□□□ -0.76
COL6A2-202ENST00000310645 NIPBLQ6KC79 2804 aaeCLIP10.32□□□□□ -0.76
COL6A2-202ENST00000310645 TRAV23DV6A0A075B6W5 121 aa10.32□□□□□ -0.76
COL6A2-202ENST00000310645 DPH3Q96FX2 82 aa10.32□□□□□ -0.76
COL6A2-202ENST00000310645 CFAP46Q8IYW2 2715 aa10.31□□□□□ -0.76
COL6A2-202ENST00000310645 CLPSL2Q6UWE3 100 aa10.3□□□□□ -0.76
COL6A2-202ENST00000310645 NF1P21359 2839 aa10.3□□□□□ -0.76
COL6A2-202ENST00000310645 RPL35AP18077 110 aaKnown RBP10.3□□□□□ -0.76
COL6A2-202ENST00000310645 XCL1P47992 114 aa10.3□□□□□ -0.76
COL6A2-202ENST00000310645 Q6YL49 198 aa10.3□□□□□ -0.76
COL6A2-202ENST00000310645 IGHV3OR16-9A0A0B4J2B5 98 aa10.29□□□□□ -0.76
COL6A2-202ENST00000310645 IBA57-AS1B1ANH7 110 aa10.29□□□□□ -0.76
COL6A2-202ENST00000310645 FAM19A1Q7Z5A9 133 aa10.29□□□□□ -0.76
COL6A2-202ENST00000310645 WFDC10AQ9H1F0 79 aa10.29□□□□□ -0.76
COL6A2-202ENST00000310645 TMEM258P61165 79 aa10.29□□□□□ -0.76
COL6A2-202ENST00000310645 GHRHP01286 108 aa10.28□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms