RNA–Protein interactions for RNA: ENST00000305264.7

HDAC3-201, Transcript of histone deacetylase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDAC3, Length 1,959 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-201ENST00000305264 COX6A2Q02221 97 aa18.01■□□□□ 0.47
HDAC3-201ENST00000305264 CD164L2Q6UWJ8 174 aa18.01■□□□□ 0.47
HDAC3-201ENST00000305264 FAM19A3Q7Z5A8 133 aa18■□□□□ 0.47
HDAC3-201ENST00000305264 IGLV4-69A0A075B6H9 119 aa17.99■□□□□ 0.47
HDAC3-201ENST00000305264 C3orf79P0CE67 100 aa17.98■□□□□ 0.47
HDAC3-201ENST00000305264 ODF1Q14990 250 aa17.98■□□□□ 0.47
HDAC3-201ENST00000305264 CHTOPQ9Y3Y2 248 aaKnown RBP17.98■□□□□ 0.47
HDAC3-201ENST00000305264 IGHV3OR16-9A0A0B4J2B5 98 aa17.97■□□□□ 0.47
HDAC3-201ENST00000305264 SYS1-DBNDD2H3BUS1 97 aa17.97■□□□□ 0.47
HDAC3-201ENST00000305264 SPATA12Q7Z6I5 190 aa17.97■□□□□ 0.47
HDAC3-201ENST00000305264 FAT2Q9NYQ8 4349 aa17.97■□□□□ 0.47
HDAC3-201ENST00000305264 MRPL35Q9NZE8 188 aaKnown RBP17.97■□□□□ 0.47
HDAC3-201ENST00000305264 TINCRA0A1B0GVN0 87 aa17.96■□□□□ 0.47
HDAC3-201ENST00000305264 IGLC3P0DOY3 106 aa17.96■□□□□ 0.47
HDAC3-201ENST00000305264 KRTDAPP60985 99 aa17.96■□□□□ 0.47
HDAC3-201ENST00000305264 C5orf38Q86SI9 138 aa17.95■□□□□ 0.46
HDAC3-201ENST00000305264 CHAC1Q9BUX1 264 aa17.95■□□□□ 0.46
HDAC3-201ENST00000305264 GEMIN7Q9H840 131 aaKnown RBP17.95■□□□□ 0.46
HDAC3-201ENST00000305264 HERVK_113P63121 156 aa17.95■□□□□ 0.46
HDAC3-201ENST00000305264 SEC11AP67812 179 aa17.95■□□□□ 0.46
HDAC3-201ENST00000305264 F8VRH5 84 aa17.94■□□□□ 0.46
HDAC3-201ENST00000305264 LECT2O14960 151 aa17.94■□□□□ 0.46
HDAC3-201ENST00000305264 WFDC2Q14508 124 aa17.94■□□□□ 0.46
HDAC3-201ENST00000305264 PMCHL2Q9BQD1 86 aa17.94■□□□□ 0.46
HDAC3-201ENST00000305264 C11orf86A6NJI1 115 aa17.93■□□□□ 0.46
HDAC3-201ENST00000305264 COX7A2LO14548 114 aa17.93■□□□□ 0.46
HDAC3-201ENST00000305264 CDKN2A-AS1Q9UH64 79 aa17.93■□□□□ 0.46
HDAC3-201ENST00000305264 TNP2Q05952 138 aa17.91■□□□□ 0.46
HDAC3-201ENST00000305264 LINC00469Q8N7U9 141 aa17.91■□□□□ 0.46
HDAC3-201ENST00000305264 LRCOL1A6NCL2 159 aa17.91■□□□□ 0.46
HDAC3-201ENST00000305264 IGLV5-45A0A087WSX0 123 aa17.9■□□□□ 0.46
HDAC3-201ENST00000305264 PET117Q6UWS5 81 aa17.9■□□□□ 0.46
HDAC3-201ENST00000305264 A0A087WZ39 114 aa17.89■□□□□ 0.45
HDAC3-201ENST00000305264 USP17L23D6RBM5 183 aa17.89■□□□□ 0.45
HDAC3-201ENST00000305264 ZNF22P17026 224 aaPredicted RBP17.88■□□□□ 0.45
HDAC3-201ENST00000305264 LINC01545Q5VT33 79 aa17.88■□□□□ 0.45
HDAC3-201ENST00000305264 C15orf56Q8N910 161 aa17.88■□□□□ 0.45
HDAC3-201ENST00000305264 MALP21145 153 aa17.88■□□□□ 0.45
HDAC3-201ENST00000305264 A0A087WTM6 91 aa17.86■□□□□ 0.45
HDAC3-201ENST00000305264 OR10D4PQ8NGN7 298 aa17.86■□□□□ 0.45
HDAC3-201ENST00000305264 DPM2O94777 84 aa17.84■□□□□ 0.45
HDAC3-201ENST00000305264 TMEM170BQ5T4T1 132 aa17.84■□□□□ 0.45
HDAC3-201ENST00000305264 PLNP26678 52 aa17.84■□□□□ 0.45
HDAC3-201ENST00000305264 DNAH11Q96DT5 4516 aa17.83■□□□□ 0.44
HDAC3-201ENST00000305264 IGHV1-58A0A0C4DH39 117 aa17.82■□□□□ 0.44
HDAC3-201ENST00000305264 IGKCP01834 107 aa17.82■□□□□ 0.44
HDAC3-201ENST00000305264 SPINK8P0C7L1 97 aa17.82■□□□□ 0.44
HDAC3-201ENST00000305264 HIGD2BQ4VC39 106 aa17.82■□□□□ 0.44
HDAC3-201ENST00000305264 LINC00336Q6ZUF6 198 aa17.82■□□□□ 0.44
HDAC3-201ENST00000305264 SMIM1B2RUZ4 78 aa17.81■□□□□ 0.44
HDAC3-201ENST00000305264 CFAP161Q6P656 301 aa17.8■□□□□ 0.44
HDAC3-201ENST00000305264 LINC01561Q8N1V8 128 aa17.8■□□□□ 0.44
HDAC3-201ENST00000305264 IGHV3-64A0A075B6Q5 118 aa17.8■□□□□ 0.44
HDAC3-201ENST00000305264 H3BRM9 83 aa17.8■□□□□ 0.44
HDAC3-201ENST00000305264 ORAOV1Q8WV07 137 aa17.8■□□□□ 0.44
HDAC3-201ENST00000305264 PKD1P98161 4303 aa17.8■□□□□ 0.44
HDAC3-201ENST00000305264 C20orf202A1L168 122 aa17.79■□□□□ 0.44
HDAC3-201ENST00000305264 APOMO95445 188 aa17.79■□□□□ 0.44
HDAC3-201ENST00000305264 GVQW2A0A096LPI5 108 aaPredicted RBP17.79■□□□□ 0.44
HDAC3-201ENST00000305264 Q8N814 137 aa17.79■□□□□ 0.44
HDAC3-201ENST00000305264 LINC00526Q96FQ7 95 aa17.79■□□□□ 0.44
HDAC3-201ENST00000305264 hDV102S1A0JD36 115 aa17.78■□□□□ 0.44
HDAC3-201ENST00000305264 HECTD4Q9Y4D8 3996 aa17.76■□□□□ 0.43
HDAC3-201ENST00000305264 TMEM223A0PJW6 202 aa17.76■□□□□ 0.43
HDAC3-201ENST00000305264 SPAG11BQ08648 103 aa17.75■□□□□ 0.43
HDAC3-201ENST00000305264 C14orf177Q52M58 125 aa17.75■□□□□ 0.43
HDAC3-201ENST00000305264 IGLV2-33A0A075B6J2 118 aaPredicted RBP17.75■□□□□ 0.43
HDAC3-201ENST00000305264 ATOH7Q8N100 152 aa17.75■□□□□ 0.43
HDAC3-201ENST00000305264 IGLV5-39A0A0G2JS06 123 aa17.73■□□□□ 0.43
HDAC3-201ENST00000305264 EREGO14944 169 aa17.73■□□□□ 0.43
HDAC3-201ENST00000305264 TOMM7Q9P0U1 55 aa17.73■□□□□ 0.43
HDAC3-201ENST00000305264 ZNF561-AS1K7EIQ3 104 aa17.72■□□□□ 0.43
HDAC3-201ENST00000305264 KIAA0087Q14695 138 aa17.72■□□□□ 0.43
HDAC3-201ENST00000305264 FUSP35637 526 aaKnown RBP eCLIP17.71■□□□□ 0.43
HDAC3-201ENST00000305264 SCGB1D1O95968 90 aa17.7■□□□□ 0.42
HDAC3-201ENST00000305264 SLPIP03973 132 aa17.7■□□□□ 0.42
HDAC3-201ENST00000305264 Q8IZM0 81 aa17.69■□□□□ 0.42
HDAC3-201ENST00000305264 KRTAP10-2P60368 255 aa17.68■□□□□ 0.42
HDAC3-201ENST00000305264 STPG4Q8N801 248 aa17.68■□□□□ 0.42
HDAC3-201ENST00000305264 COX7B2Q8TF08 81 aa17.68■□□□□ 0.42
HDAC3-201ENST00000305264 A0A1B0GVY2 172 aa17.68■□□□□ 0.42
HDAC3-201ENST00000305264 NTN5Q8WTR8 489 aaPredicted RBP17.68■□□□□ 0.42
HDAC3-201ENST00000305264 PRSS2P07478 247 aa17.67■□□□□ 0.42
HDAC3-201ENST00000305264 DNAH5Q8TE73 4624 aa17.67■□□□□ 0.42
HDAC3-201ENST00000305264 C2orf82Q6UX34 121 aa17.66■□□□□ 0.42
HDAC3-201ENST00000305264 HERVK_113P61574 105 aa17.65■□□□□ 0.42
HDAC3-201ENST00000305264 C6orf226Q5I0X4 101 aa17.65■□□□□ 0.42
HDAC3-201ENST00000305264 AKR1D1P51857 326 aa17.64■□□□□ 0.41
HDAC3-201ENST00000305264 C2orf48Q96LS8 159 aa17.64■□□□□ 0.41
HDAC3-201ENST00000305264 CAMK2N2Q96S95 79 aa17.64■□□□□ 0.41
HDAC3-201ENST00000305264 PKHD1P08F94 4074 aa17.64■□□□□ 0.41
HDAC3-201ENST00000305264 CNBPP62633 177 aaKnown RBP17.64■□□□□ 0.41
HDAC3-201ENST00000305264 JOSD1Q15040 202 aaPredicted RBP17.64■□□□□ 0.41
HDAC3-201ENST00000305264 TSPEAR-AS2P59090 65 aa17.62■□□□□ 0.41
HDAC3-201ENST00000305264 MAJINQ3KP22 176 aa17.62■□□□□ 0.41
HDAC3-201ENST00000305264 C10orf25Q5T742 122 aa17.62■□□□□ 0.41
HDAC3-201ENST00000305264 Q6ZRU5 148 aa17.62■□□□□ 0.41
HDAC3-201ENST00000305264 SYCNQ0VAF6 134 aa17.61■□□□□ 0.41
HDAC3-201ENST00000305264 UNQ6190/PRO20217Q6UXQ8 127 aa17.61■□□□□ 0.41
HDAC3-201ENST00000305264 E9PLD3 99 aa17.6■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 125.5 ms