RNA–Protein interactions for RNA: ENST00000303395.8

SCN1A-201, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCN1A, Length 8,533 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-201ENST00000303395 NUPR2A6NF83 97 aa3.94□□□□□ -1.78
SCN1A-201ENST00000303395 MDFIQ99750 246 aa3.94□□□□□ -1.78
SCN1A-201ENST00000303395 SDIM1Q6ZPB5 146 aa3.94□□□□□ -1.78
SCN1A-201ENST00000303395 AMELXQ99217 191 aa3.94□□□□□ -1.78
SCN1A-201ENST00000303395 TPSG1Q9NRR2 321 aa3.94□□□□□ -1.78
SCN1A-201ENST00000303395 FAM215AQ9Y5M1 114 aa3.94□□□□□ -1.78
SCN1A-201ENST00000303395 IGLV5-45A0A087WSX0 123 aa3.94□□□□□ -1.78
SCN1A-201ENST00000303395 EPOPA6NHQ4 379 aa3.94□□□□□ -1.78
SCN1A-201ENST00000303395 E7EQL1 145 aa3.94□□□□□ -1.78
SCN1A-201ENST00000303395 M0QY20 66 aa3.94□□□□□ -1.78
SCN1A-201ENST00000303395 XGP55808 180 aa3.94□□□□□ -1.78
SCN1A-201ENST00000303395 Q8IZM0 81 aa3.94□□□□□ -1.78
SCN1A-201ENST00000303395 IGLV9-49A0A0B4J1Y8 123 aa3.94□□□□□ -1.78
SCN1A-201ENST00000303395 A0A0J9YXV3 536 aa3.94□□□□□ -1.78
SCN1A-201ENST00000303395 A6NDX4 124 aa3.94□□□□□ -1.78
SCN1A-201ENST00000303395 IGIPA6NJ69 53 aa3.94□□□□□ -1.78
SCN1A-201ENST00000303395 ZFAND3Q9H8U3 227 aa3.94□□□□□ -1.78
SCN1A-201ENST00000303395 CCKP06307 115 aa3.93□□□□□ -1.78
SCN1A-201ENST00000303395 ZFAND2AQ8N6M9 145 aa3.93□□□□□ -1.78
SCN1A-201ENST00000303395 TNFRSF13BO14836 293 aaPredicted RBP3.93□□□□□ -1.78
SCN1A-201ENST00000303395 GDF5OSQ5U4N7 250 aa3.93□□□□□ -1.78
SCN1A-201ENST00000303395 TRIAP1O43715 76 aa3.93□□□□□ -1.78
SCN1A-201ENST00000303395 MIR7-3HGQ8N6C7 128 aa3.93□□□□□ -1.78
SCN1A-201ENST00000303395 CIRBP-AS1Q8TBR5 109 aa3.93□□□□□ -1.78
SCN1A-201ENST00000303395 IGLV4-3A0A075B6K6 122 aa3.93□□□□□ -1.78
SCN1A-201ENST00000303395 C3orf84H3BNL1 204 aa3.93□□□□□ -1.78
SCN1A-201ENST00000303395 FAM19A5Q7Z5A7 132 aaPredicted RBP3.93□□□□□ -1.78
SCN1A-201ENST00000303395 TRAV10A0A0B4J240 114 aa3.93□□□□□ -1.78
SCN1A-201ENST00000303395 ESRGQ1W209 222 aa3.93□□□□□ -1.78
SCN1A-201ENST00000303395 ZNF843Q8N446 348 aa3.93□□□□□ -1.78
SCN1A-201ENST00000303395 PRO0255Q9UI72 69 aa3.93□□□□□ -1.78
SCN1A-201ENST00000303395 LIMD2Q9BT23 127 aa3.93□□□□□ -1.78
SCN1A-201ENST00000303395 K7EQG2 157 aa3.92□□□□□ -1.78
SCN1A-201ENST00000303395 OXLD1Q5BKU9 147 aa3.92□□□□□ -1.78
SCN1A-201ENST00000303395 SPAG11AQ6PDA7 123 aa3.92□□□□□ -1.78
SCN1A-201ENST00000303395 Q6ZQY7 126 aa3.92□□□□□ -1.78
SCN1A-201ENST00000303395 G3V318 75 aa3.92□□□□□ -1.78
SCN1A-201ENST00000303395 LY6G6CO95867 125 aa3.92□□□□□ -1.78
SCN1A-201ENST00000303395 TFF1P04155 84 aa3.92□□□□□ -1.78
SCN1A-201ENST00000303395 C4orf3Q8WVX3 66 aa3.92□□□□□ -1.78
SCN1A-201ENST00000303395 IGLV2-33A0A075B6J2 118 aaPredicted RBP3.92□□□□□ -1.78
SCN1A-201ENST00000303395 hDV103S1A0JD37 113 aa3.92□□□□□ -1.78
SCN1A-201ENST00000303395 MRPS12O15235 138 aaKnown RBP3.92□□□□□ -1.78
SCN1A-201ENST00000303395 ESM1Q9NQ30 184 aa3.92□□□□□ -1.78
SCN1A-201ENST00000303395 ENHOQ6UWT2 76 aa3.92□□□□□ -1.78
SCN1A-201ENST00000303395 ZNF581Q9P0T4 197 aa3.92□□□□□ -1.78
SCN1A-201ENST00000303395 DEFB136Q30KP8 78 aa3.92□□□□□ -1.78
SCN1A-201ENST00000303395 SIRPDQ9H106 197 aa3.92□□□□□ -1.78
SCN1A-201ENST00000303395 DEFB113Q30KQ7 82 aa3.92□□□□□ -1.78
SCN1A-201ENST00000303395 DEFB131BA0A096LNP1 70 aa3.91□□□□□ -1.78
SCN1A-201ENST00000303395 PRO0461Q9UI25 63 aa3.91□□□□□ -1.78
SCN1A-201ENST00000303395 IGLV2-18A0A075B6J9 118 aa3.91□□□□□ -1.78
SCN1A-201ENST00000303395 SPINK1P00995 79 aa3.91□□□□□ -1.78
SCN1A-201ENST00000303395 SLURP1P55000 103 aa3.91□□□□□ -1.78
SCN1A-201ENST00000303395 PRLHP81277 87 aa3.91□□□□□ -1.78
SCN1A-201ENST00000303395 Q6ZPA2 131 aa3.91□□□□□ -1.78
SCN1A-201ENST00000303395 WFDC13Q8IUB5 93 aa3.91□□□□□ -1.78
SCN1A-201ENST00000303395 ZNRD1Q9P1U0 126 aa3.91□□□□□ -1.78
SCN1A-201ENST00000303395 REG3AQ06141 175 aa3.91□□□□□ -1.78
SCN1A-201ENST00000303395 XAGE1AQ9HD64 81 aa3.91□□□□□ -1.78
SCN1A-201ENST00000303395 A0A1B0GUV1 79 aa3.91□□□□□ -1.78
SCN1A-201ENST00000303395 LOC110117498A0A087WWA1 95 aa3.9□□□□□ -1.78
SCN1A-201ENST00000303395 BEAN1Q3B7T3 259 aa3.9□□□□□ -1.78
SCN1A-201ENST00000303395 CLEC2BQ92478 149 aa3.9□□□□□ -1.78
SCN1A-201ENST00000303395 IGLV5-39A0A0G2JS06 123 aa3.9□□□□□ -1.78
SCN1A-201ENST00000303395 GNRH2O43555 120 aa3.9□□□□□ -1.78
SCN1A-201ENST00000303395 CTSZQ9UBR2 303 aa3.9□□□□□ -1.78
SCN1A-201ENST00000303395 LY6HO94772 140 aa3.9□□□□□ -1.79
SCN1A-201ENST00000303395 MIFP14174 115 aa3.9□□□□□ -1.79
SCN1A-201ENST00000303395 LINC00269Q8N2A0 174 aa3.9□□□□□ -1.79
SCN1A-201ENST00000303395 SETD2Q9BYW2 2564 aaPredicted RBP3.9□□□□□ -1.79
SCN1A-201ENST00000303395 ZNF503-AS2A6NEH8 195 aa3.9□□□□□ -1.79
SCN1A-201ENST00000303395 ADORA2A-AS1P86434 159 aa3.9□□□□□ -1.79
SCN1A-201ENST00000303395 CD164L2Q6UWJ8 174 aa3.9□□□□□ -1.79
SCN1A-201ENST00000303395 ABCA12Q86UK0 2595 aa3.9□□□□□ -1.79
SCN1A-201ENST00000303395 FHL2Q14192 279 aa3.89□□□□□ -1.79
SCN1A-201ENST00000303395 CELA1Q9UNI1 258 aa3.89□□□□□ -1.79
SCN1A-201ENST00000303395 SHISA2Q6UWI4 295 aa3.89□□□□□ -1.79
SCN1A-201ENST00000303395 LYPD2Q6UXB3 125 aa3.89□□□□□ -1.79
SCN1A-201ENST00000303395 JMJD1CQ15652 2540 aa3.89□□□□□ -1.79
SCN1A-201ENST00000303395 PLAC8L1A1L4L8 177 aa3.89□□□□□ -1.79
SCN1A-201ENST00000303395 SCXQ7RTU7 201 aa3.89□□□□□ -1.79
SCN1A-201ENST00000303395 FAM30AQ9NZY2 134 aa3.89□□□□□ -1.79
SCN1A-201ENST00000303395 CDIP1Q9H305 208 aa3.89□□□□□ -1.79
SCN1A-201ENST00000303395 SNURFQ9Y675 71 aa3.89□□□□□ -1.79
SCN1A-201ENST00000303395 C7orf65Q6ZTY9 151 aa3.89□□□□□ -1.79
SCN1A-201ENST00000303395 CYP4F30PQ9H0H9 118 aa3.89□□□□□ -1.79
SCN1A-201ENST00000303395 ANKRD17O75179 2603 aaKnown RBP3.89□□□□□ -1.79
SCN1A-201ENST00000303395 SLPIP03973 132 aa3.89□□□□□ -1.79
SCN1A-201ENST00000303395 DEFB4AO15263 64 aa3.88□□□□□ -1.79
SCN1A-201ENST00000303395 RPL39LQ96EH5 51 aaKnown RBP3.88□□□□□ -1.79
SCN1A-201ENST00000303395 USP24Q9UPU5 2620 aa3.88□□□□□ -1.79
SCN1A-201ENST00000303395 URB1-AS1Q96HZ7 61 aa3.88□□□□□ -1.79
SCN1A-201ENST00000303395 ELOF1P60002 83 aaKnown RBP3.88□□□□□ -1.79
SCN1A-201ENST00000303395 TSHBP01222 138 aa3.88□□□□□ -1.79
SCN1A-201ENST00000303395 MLANAQ16655 118 aa3.88□□□□□ -1.79
SCN1A-201ENST00000303395 TP53AIP1Q9HCN2 124 aa3.88□□□□□ -1.79
SCN1A-201ENST00000303395 M0R378 163 aa3.88□□□□□ -1.79
SCN1A-201ENST00000303395 WDR87Q6ZQQ6 2873 aa3.87□□□□□ -1.79
SCN1A-201ENST00000303395 IGKV2-28A0A075B6P5 120 aa3.87□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 100.2 ms