RNA–Protein interactions for RNA: ENST00000302190.8

SDC2-201, Transcript of syndecan 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDC2, Length 3,759 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2-201ENST00000302190 HERVK_113P63121 156 aa10.29□□□□□ -0.76
SDC2-201ENST00000302190 ATRQ13535 2644 aa10.29□□□□□ -0.76
SDC2-201ENST00000302190 Q6ZSN1 163 aa10.28□□□□□ -0.76
SDC2-201ENST00000302190 J3QLI3 93 aa10.28□□□□□ -0.76
SDC2-201ENST00000302190 SMR3AQ99954 134 aa10.28□□□□□ -0.76
SDC2-201ENST00000302190 C9orf85Q96MD7 179 aa10.27□□□□□ -0.76
SDC2-201ENST00000302190 SMIM9A6NGZ8 99 aa10.27□□□□□ -0.77
SDC2-201ENST00000302190 HIST1H4AP62805 103 aaKnown RBP10.27□□□□□ -0.77
SDC2-201ENST00000302190 POM121L12Q8N7R1 296 aa10.27□□□□□ -0.77
SDC2-201ENST00000302190 Q6Q795 121 aa10.27□□□□□ -0.77
SDC2-201ENST00000302190 DNAJC30Q96LL9 226 aa10.26□□□□□ -0.77
SDC2-201ENST00000302190 BAALC-AS2P0C853 105 aa10.26□□□□□ -0.77
SDC2-201ENST00000302190 LINC00315P59091 139 aa10.26□□□□□ -0.77
SDC2-201ENST00000302190 DEFB113Q30KQ7 82 aa10.26□□□□□ -0.77
SDC2-201ENST00000302190 KIF25-AS1Q9Y6Z4 181 aa10.26□□□□□ -0.77
SDC2-201ENST00000302190 LOC100131303A0A0U1RQF7 123 aa10.26□□□□□ -0.77
SDC2-201ENST00000302190 ADAMTSL4-AS1Q5T5F5 129 aa10.26□□□□□ -0.77
SDC2-201ENST00000302190 RBMY1BA6NDE4 496 aaKnown RBP10.25□□□□□ -0.77
SDC2-201ENST00000302190 RBMY1EA6NEQ0 496 aaKnown RBP10.25□□□□□ -0.77
SDC2-201ENST00000302190 RBMY1DP0C7P1 496 aaKnown RBP10.25□□□□□ -0.77
SDC2-201ENST00000302190 RBMY1A1P0DJD3 496 aaKnown RBP10.25□□□□□ -0.77
SDC2-201ENST00000302190 RBMY1CP0DJD4 496 aa10.25□□□□□ -0.77
SDC2-201ENST00000302190 ZNF575Q86XF7 245 aa10.25□□□□□ -0.77
SDC2-201ENST00000302190 ATP5G1P05496 136 aa10.25□□□□□ -0.77
SDC2-201ENST00000302190 CR1P17927 2039 aa10.25□□□□□ -0.77
SDC2-201ENST00000302190 TRBV6-5A0A0K0K1A5 114 aa10.24□□□□□ -0.77
SDC2-201ENST00000302190 TRBV10-2A0A0K0K1G8 114 aa10.24□□□□□ -0.77
SDC2-201ENST00000302190 DEFB114Q30KQ6 69 aa10.24□□□□□ -0.77
SDC2-201ENST00000302190 TMEM86BQ8N661 226 aa10.24□□□□□ -0.77
SDC2-201ENST00000302190 MIR7-3HGQ8N6C7 128 aa10.24□□□□□ -0.77
SDC2-201ENST00000302190 ZNF702PQ9H963 129 aa10.24□□□□□ -0.77
SDC2-201ENST00000302190 J3KT08 172 aa10.24□□□□□ -0.77
SDC2-201ENST00000302190 K7EQD1 137 aa10.24□□□□□ -0.77
SDC2-201ENST00000302190 MAST4O15021 2626 aa10.24□□□□□ -0.77
SDC2-201ENST00000302190 RBMY1FQ15415 496 aaKnown RBP10.24□□□□□ -0.77
SDC2-201ENST00000302190 MIAQ16674 131 aa10.24□□□□□ -0.77
SDC2-201ENST00000302190 IGHV4-31P0DP07 118 aa10.23□□□□□ -0.77
SDC2-201ENST00000302190 SND1-IT1Q9HBX3 110 aa10.23□□□□□ -0.77
SDC2-201ENST00000302190 S100A7L2Q5SY68 101 aa10.23□□□□□ -0.77
SDC2-201ENST00000302190 FAM19A5Q7Z5A7 132 aaPredicted RBP10.23□□□□□ -0.77
SDC2-201ENST00000302190 Q6YL49 198 aa10.22□□□□□ -0.77
SDC2-201ENST00000302190 ODF3Q96PU9 254 aa10.22□□□□□ -0.77
SDC2-201ENST00000302190 ANGP03950 147 aaKnown RBP10.21□□□□□ -0.77
SDC2-201ENST00000302190 KLK5Q9Y337 293 aaPredicted RBP10.21□□□□□ -0.77
SDC2-201ENST00000302190 F5H768 121 aa10.21□□□□□ -0.77
SDC2-201ENST00000302190 GYPEP15421 78 aa10.21□□□□□ -0.78
SDC2-201ENST00000302190 A0A0B4J2C4 111 aa10.2□□□□□ -0.78
SDC2-201ENST00000302190 TMEM263Q8WUH6 116 aaKnown RBP10.2□□□□□ -0.78
SDC2-201ENST00000302190 SBSPONQ8IVN8 264 aa10.2□□□□□ -0.78
SDC2-201ENST00000302190 UBE2D4Q9Y2X8 147 aa10.2□□□□□ -0.78
SDC2-201ENST00000302190 DNAJC9-AS1A6NH13 148 aa10.2□□□□□ -0.78
SDC2-201ENST00000302190 TRAV25A0A0B4J276 109 aa10.19□□□□□ -0.78
SDC2-201ENST00000302190 IGKV3D-7A0A0C4DH55 119 aa10.19□□□□□ -0.78
SDC2-201ENST00000302190 COX6A2Q02221 97 aa10.19□□□□□ -0.78
SDC2-201ENST00000302190 SS18Q15532 418 aa10.19□□□□□ -0.78
SDC2-201ENST00000302190 LINC00308Q8TCZ7 52 aa10.18□□□□□ -0.78
SDC2-201ENST00000302190 LAMTOR3Q9UHA4 124 aa10.18□□□□□ -0.78
SDC2-201ENST00000302190 TMEM89A2RUT3 159 aa10.17□□□□□ -0.78
SDC2-201ENST00000302190 SLPIP03973 132 aa10.17□□□□□ -0.78
SDC2-201ENST00000302190 C4orf3Q8WVX3 66 aa10.17□□□□□ -0.78
SDC2-201ENST00000302190 LECT2O14960 151 aa10.17□□□□□ -0.78
SDC2-201ENST00000302190 NSD1Q96L73 2696 aaPredicted RBP10.17□□□□□ -0.78
SDC2-201ENST00000302190 C3orf22Q8N5N4 141 aa10.17□□□□□ -0.78
SDC2-201ENST00000302190 LINC01546A6NGU7 62 aa10.16□□□□□ -0.78
SDC2-201ENST00000302190 ODF3L2Q3SX64 289 aa10.16□□□□□ -0.78
SDC2-201ENST00000302190 COX7B2Q8TF08 81 aa10.16□□□□□ -0.78
SDC2-201ENST00000302190 DAZ2Q13117 558 aaKnown RBP10.16□□□□□ -0.78
SDC2-201ENST00000302190 DAZ4Q86SG3 579 aaKnown RBP10.16□□□□□ -0.78
SDC2-201ENST00000302190 KRTAP1-3Q8IUG1 177 aa10.16□□□□□ -0.78
SDC2-201ENST00000302190 DAZ3Q9NR90 486 aaKnown RBP10.16□□□□□ -0.78
SDC2-201ENST00000302190 H3BT86 120 aa10.16□□□□□ -0.78
SDC2-201ENST00000302190 MRPS36P82909 103 aaKnown RBP10.15□□□□□ -0.78
SDC2-201ENST00000302190 DEFB135Q30KP9 77 aa10.15□□□□□ -0.78
SDC2-201ENST00000302190 TENM1Q9UKZ4 2725 aa10.14□□□□□ -0.79
SDC2-201ENST00000302190 UQCRQO14949 82 aa10.14□□□□□ -0.79
SDC2-201ENST00000302190 LINC00526Q96FQ7 95 aa10.14□□□□□ -0.79
SDC2-201ENST00000302190 TRAV13-2A0A0B4J235 113 aa10.14□□□□□ -0.79
SDC2-201ENST00000302190 H7C423 109 aa10.14□□□□□ -0.79
SDC2-201ENST00000302190 C14orf132Q9NPU4 83 aa10.14□□□□□ -0.79
SDC2-201ENST00000302190 TRACP01848 142 aa10.14□□□□□ -0.79
SDC2-201ENST00000302190 LINC00242Q5T6M2 205 aa10.14□□□□□ -0.79
SDC2-201ENST00000302190 LRRC75A-AS1Q8N1F1 130 aa10.14□□□□□ -0.79
SDC2-201ENST00000302190 CHCHD7Q9BUK0 85 aa10.14□□□□□ -0.79
SDC2-201ENST00000302190 A0A096LNT2 108 aa10.13□□□□□ -0.79
SDC2-201ENST00000302190 DAD1P61803 113 aa10.13□□□□□ -0.79
SDC2-201ENST00000302190 LINC00482Q8N8I6 264 aa10.13□□□□□ -0.79
SDC2-201ENST00000302190 FAM19A4Q96LR4 140 aa10.13□□□□□ -0.79
SDC2-201ENST00000302190 PYGO1Q9Y3Y4 419 aa10.13□□□□□ -0.79
SDC2-201ENST00000302190 MGAM2Q2M2H8 2515 aa10.13□□□□□ -0.79
SDC2-201ENST00000302190 TRBV30A0A0K0K1B3 111 aa10.13□□□□□ -0.79
SDC2-201ENST00000302190 INAFM2P0DMQ5 153 aa10.11□□□□□ -0.79
SDC2-201ENST00000302190 C1orf158Q8N1D5 194 aa10.1□□□□□ -0.79
SDC2-201ENST00000302190 RNF152Q8N8N0 203 aa10.1□□□□□ -0.79
SDC2-201ENST00000302190 C16orf74Q96GX8 76 aa10.1□□□□□ -0.79
SDC2-201ENST00000302190 VWFP04275 2813 aa10.1□□□□□ -0.79
SDC2-201ENST00000302190 EIF4EBP3O60516 100 aaPredicted RBP10.1□□□□□ -0.79
SDC2-201ENST00000302190 ACYP1P07311 99 aa10.1□□□□□ -0.79
SDC2-201ENST00000302190 NDUFA1O15239 70 aa10.09□□□□□ -0.79
SDC2-201ENST00000302190 hADV29S1A0JD25 119 aa10.09□□□□□ -0.79
SDC2-201ENST00000302190 COX7A2LO14548 114 aa10.09□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 95.6 ms