RNA–Protein interactions for RNA: ENST00000300527.8

COL6A2-201, Transcript of collagen type VI alpha 2 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL6A2, Length 3,461 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2-201ENST00000300527 Q96MF0 132 aa10.49□□□□□ -0.73
COL6A2-201ENST00000300527 CSDC2Q9Y534 153 aaKnown RBP10.49□□□□□ -0.73
COL6A2-201ENST00000300527 EPG5Q9HCE0 2579 aa10.49□□□□□ -0.73
COL6A2-201ENST00000300527 NAV2Q8IVL1 2488 aa10.49□□□□□ -0.73
COL6A2-201ENST00000300527 FAM19A5Q7Z5A7 132 aaPredicted RBP10.49□□□□□ -0.73
COL6A2-201ENST00000300527 SMIM11BQ8TCY0 68 aa10.49□□□□□ -0.73
COL6A2-201ENST00000300527 A0A1W2PRX2 142 aa10.48□□□□□ -0.73
COL6A2-201ENST00000300527 C5orf38Q86SI9 138 aa10.48□□□□□ -0.73
COL6A2-201ENST00000300527 WFDC9Q8NEX5 89 aa10.48□□□□□ -0.73
COL6A2-201ENST00000300527 KIR2DL5BQ8NHK3 375 aa10.48□□□□□ -0.73
COL6A2-201ENST00000300527 C22orf24Q9Y442 160 aa10.48□□□□□ -0.73
COL6A2-201ENST00000300527 MYO18BQ8IUG5 2567 aa10.48□□□□□ -0.73
COL6A2-201ENST00000300527 J3KT08 172 aa10.48□□□□□ -0.73
COL6A2-201ENST00000300527 NTM-AS1Q6ZSK4 140 aa10.48□□□□□ -0.73
COL6A2-201ENST00000300527 TRAV13-2A0A0B4J235 113 aa10.48□□□□□ -0.73
COL6A2-201ENST00000300527 LOC100131303A0A0U1RQF7 123 aa10.48□□□□□ -0.73
COL6A2-201ENST00000300527 BEAN1Q3B7T3 259 aa10.48□□□□□ -0.73
COL6A2-201ENST00000300527 LINC00846Q9NV44 126 aa10.48□□□□□ -0.73
COL6A2-201ENST00000300527 IGLV5-45A0A087WSX0 123 aa10.47□□□□□ -0.73
COL6A2-201ENST00000300527 MAP6D1Q9H9H5 199 aa10.47□□□□□ -0.73
COL6A2-201ENST00000300527 UTP20O75691 2785 aaKnown RBP10.47□□□□□ -0.73
COL6A2-201ENST00000300527 CHD6Q8TD26 2715 aa10.47□□□□□ -0.73
COL6A2-201ENST00000300527 TMEM89A2RUT3 159 aa10.47□□□□□ -0.73
COL6A2-201ENST00000300527 C11orf72Q8NBR9 251 aa10.47□□□□□ -0.73
COL6A2-201ENST00000300527 DSCR8Q96T75 97 aa10.47□□□□□ -0.73
COL6A2-201ENST00000300527 B4DSR2 109 aa10.46□□□□□ -0.73
COL6A2-201ENST00000300527 ATOX1O00244 68 aa10.46□□□□□ -0.73
COL6A2-201ENST00000300527 CCDC168Q8NDH2 2452 aa10.46□□□□□ -0.73
COL6A2-201ENST00000300527 UCNP55089 124 aa10.46□□□□□ -0.73
COL6A2-201ENST00000300527 TRGV2A0A075B6R0 118 aa10.45□□□□□ -0.74
COL6A2-201ENST00000300527 NOP10Q9NPE3 64 aaKnown RBP10.45□□□□□ -0.74
COL6A2-201ENST00000300527 STHQ8IWL8 128 aa10.45□□□□□ -0.74
COL6A2-201ENST00000300527 COX7B2Q8TF08 81 aa10.45□□□□□ -0.74
COL6A2-201ENST00000300527 CDC42SE2Q9NRR3 84 aa10.44□□□□□ -0.74
COL6A2-201ENST00000300527 FLNCQ14315 2725 aa10.44□□□□□ -0.74
COL6A2-201ENST00000300527 IGKV2-28A0A075B6P5 120 aa10.44□□□□□ -0.74
COL6A2-201ENST00000300527 IGKV2D-28P01615 120 aa10.44□□□□□ -0.74
COL6A2-201ENST00000300527 TMEM243Q9BU79 118 aa10.44□□□□□ -0.74
COL6A2-201ENST00000300527 ABCA12Q86UK0 2595 aa10.44□□□□□ -0.74
COL6A2-201ENST00000300527 K7EQD1 137 aa10.43□□□□□ -0.74
COL6A2-201ENST00000300527 FBN2P35556 2912 aa10.43□□□□□ -0.74
COL6A2-201ENST00000300527 F5H768 121 aa10.43□□□□□ -0.74
COL6A2-201ENST00000300527 RPL18AQ02543 176 aaKnown RBP10.43□□□□□ -0.74
COL6A2-201ENST00000300527 CLPSL2Q6UWE3 100 aa10.43□□□□□ -0.74
COL6A2-201ENST00000300527 RNF152Q8N8N0 203 aa10.43□□□□□ -0.74
COL6A2-201ENST00000300527 CCL18P55774 89 aa10.42□□□□□ -0.74
COL6A2-201ENST00000300527 HILS1P60008 231 aa10.42□□□□□ -0.74
COL6A2-201ENST00000300527 LRRK2Q5S007 2527 aa10.42□□□□□ -0.74
COL6A2-201ENST00000300527 PLA2G2AP14555 144 aa10.42□□□□□ -0.74
COL6A2-201ENST00000300527 CXCL5P42830 114 aa10.42□□□□□ -0.74
COL6A2-201ENST00000300527 RPL28P46779 137 aaKnown RBP10.42□□□□□ -0.74
COL6A2-201ENST00000300527 C2orf48Q96LS8 159 aa10.42□□□□□ -0.74
COL6A2-201ENST00000300527 SMIM9A6NGZ8 99 aa10.41□□□□□ -0.74
COL6A2-201ENST00000300527 TRAV23DV6A0A075B6W5 121 aa10.41□□□□□ -0.74
COL6A2-201ENST00000300527 USP17L23D6RBM5 183 aa10.41□□□□□ -0.74
COL6A2-201ENST00000300527 FAM222AQ5U5X8 452 aa10.41□□□□□ -0.74
COL6A2-201ENST00000300527 LRRC75A-AS1Q8N1F1 130 aa10.41□□□□□ -0.74
COL6A2-201ENST00000300527 ANKRD17O75179 2603 aaKnown RBP10.4□□□□□ -0.74
COL6A2-201ENST00000300527 MXRA5Q9NR99 2828 aa10.4□□□□□ -0.74
COL6A2-201ENST00000300527 NBL1P41271 181 aa10.4□□□□□ -0.74
COL6A2-201ENST00000300527 PRR3P79522 188 aaKnown RBP10.4□□□□□ -0.74
COL6A2-201ENST00000300527 ZFYVE26Q68DK2 2539 aa10.4□□□□□ -0.75
COL6A2-201ENST00000300527 RPL35AP18077 110 aaKnown RBP10.39□□□□□ -0.75
COL6A2-201ENST00000300527 C6orf226Q5I0X4 101 aa10.39□□□□□ -0.75
COL6A2-201ENST00000300527 TRGV4A0A0C4DH28 118 aa10.39□□□□□ -0.75
COL6A2-201ENST00000300527 IGLV4-60A0A075B6I1 120 aa10.38□□□□□ -0.75
COL6A2-201ENST00000300527 C1orf158Q8N1D5 194 aa10.38□□□□□ -0.75
COL6A2-201ENST00000300527 ZNF702PQ9H963 129 aa10.38□□□□□ -0.75
COL6A2-201ENST00000300527 XCL1P47992 114 aa10.38□□□□□ -0.75
COL6A2-201ENST00000300527 CRYGAP11844 174 aa10.37□□□□□ -0.75
COL6A2-201ENST00000300527 NIPBLQ6KC79 2804 aaeCLIP10.37□□□□□ -0.75
COL6A2-201ENST00000300527 SERP2Q8N6R1 65 aa10.37□□□□□ -0.75
COL6A2-201ENST00000300527 WFDC10AQ9H1F0 79 aa10.37□□□□□ -0.75
COL6A2-201ENST00000300527 PRORYQ9H606 182 aa10.37□□□□□ -0.75
COL6A2-201ENST00000300527 LINC01561Q8N1V8 128 aa10.36□□□□□ -0.75
COL6A2-201ENST00000300527 A0A096LPF7 62 aa10.36□□□□□ -0.75
COL6A2-201ENST00000300527 C5orf47Q569G3 176 aa10.36□□□□□ -0.75
COL6A2-201ENST00000300527 DEFB114Q30KQ6 69 aa10.35□□□□□ -0.75
COL6A2-201ENST00000300527 ODF3L2Q3SX64 289 aa10.35□□□□□ -0.75
COL6A2-201ENST00000300527 ORMDL1Q9P0S3 153 aa10.35□□□□□ -0.75
COL6A2-201ENST00000300527 PF4P02776 101 aa10.35□□□□□ -0.75
COL6A2-201ENST00000300527 OVOL2Q9BRP0 275 aa10.35□□□□□ -0.75
COL6A2-201ENST00000300527 H0YGX0 51 aa10.35□□□□□ -0.75
COL6A2-201ENST00000300527 FAM19A1Q7Z5A9 133 aa10.35□□□□□ -0.75
COL6A2-201ENST00000300527 ENHOQ6UWT2 76 aa10.34□□□□□ -0.75
COL6A2-201ENST00000300527 GHRHP01286 108 aa10.34□□□□□ -0.75
COL6A2-201ENST00000300527 Q6JHZ5 121 aa10.34□□□□□ -0.75
COL6A2-201ENST00000300527 LINC01356Q8N9X3 169 aa10.34□□□□□ -0.75
COL6A2-201ENST00000300527 HRCT1Q6UXD1 115 aa10.33□□□□□ -0.76
COL6A2-201ENST00000300527 PKD1L2Q7Z442 2459 aa10.33□□□□□ -0.76
COL6A2-201ENST00000300527 TEX15Q9BXT5 2789 aa10.33□□□□□ -0.76
COL6A2-201ENST00000300527 NF1P21359 2839 aa10.33□□□□□ -0.76
COL6A2-201ENST00000300527 NBEAL2Q6ZNJ1 2754 aa10.33□□□□□ -0.76
COL6A2-201ENST00000300527 DEFB130BP0DP73 79 aa10.32□□□□□ -0.76
COL6A2-201ENST00000300527 DEFB130AP0DP74 79 aa10.32□□□□□ -0.76
COL6A2-201ENST00000300527 C4orf26Q17RF5 130 aa10.32□□□□□ -0.76
COL6A2-201ENST00000300527 C20orf197Q8N268 126 aa10.32□□□□□ -0.76
COL6A2-201ENST00000300527 DPH3Q96FX2 82 aa10.32□□□□□ -0.76
COL6A2-201ENST00000300527 TRBV10-1A0A0K0K1A3 114 aa10.32□□□□□ -0.76
COL6A2-201ENST00000300527 DOPEY1Q5JWR5 2465 aa10.32□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 90.4 ms