RNA–Protein interactions for RNA: ENST00000298838.10

PACSIN3-201, Transcript of protein kinase C and casein kinase substrate in neurons 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PACSIN3, Length 1,843 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACSIN3-201ENST00000298838 ENHOQ6UWT2 76 aa14.02□□□□□ -0.16
PACSIN3-201ENST00000298838 TMEM223A0PJW6 202 aa14.01□□□□□ -0.17
PACSIN3-201ENST00000298838 TENM2Q9NT68 2774 aa14.01□□□□□ -0.17
PACSIN3-201ENST00000298838 XCL1P47992 114 aa14.01□□□□□ -0.17
PACSIN3-201ENST00000298838 IGLV10-54A0A075B6I4 117 aa14□□□□□ -0.17
PACSIN3-201ENST00000298838 MIAQ16674 131 aa14□□□□□ -0.17
PACSIN3-201ENST00000298838 CHCHD10Q8WYQ3 142 aaPredicted RBP14□□□□□ -0.17
PACSIN3-201ENST00000298838 E9PLD3 99 aa13.99□□□□□ -0.17
PACSIN3-201ENST00000298838 NMUP48645 174 aa13.99□□□□□ -0.17
PACSIN3-201ENST00000298838 C10orf126Q8N4M7 172 aa13.99□□□□□ -0.17
PACSIN3-201ENST00000298838 TRAV8-4A0A0B4J246 113 aa13.99□□□□□ -0.17
PACSIN3-201ENST00000298838 IGHV3OR16-9A0A0B4J2B5 98 aa13.99□□□□□ -0.17
PACSIN3-201ENST00000298838 IGKV2D-26A0A0A0MRZ7 120 aa13.98□□□□□ -0.17
PACSIN3-201ENST00000298838 TSTD3H0UI37 97 aa13.98□□□□□ -0.17
PACSIN3-201ENST00000298838 PRO1933Q9H354 126 aa13.98□□□□□ -0.17
PACSIN3-201ENST00000298838 K7EP13 123 aa13.97□□□□□ -0.17
PACSIN3-201ENST00000298838 SPINK8P0C7L1 97 aa13.97□□□□□ -0.17
PACSIN3-201ENST00000298838 CD164L2Q6UWJ8 174 aa13.97□□□□□ -0.17
PACSIN3-201ENST00000298838 PLECQ15149 4684 aaKnown RBP13.97□□□□□ -0.17
PACSIN3-201ENST00000298838 IGHV3-64A0A075B6Q5 118 aa13.96□□□□□ -0.17
PACSIN3-201ENST00000298838 C14orf144Q96I85 54 aa13.96□□□□□ -0.17
PACSIN3-201ENST00000298838 LYSTQ99698 3801 aa13.95□□□□□ -0.18
PACSIN3-201ENST00000298838 TRAV8-3A0A0A6YYJ7 113 aa13.95□□□□□ -0.18
PACSIN3-201ENST00000298838 A0A087WZ39 114 aa13.94□□□□□ -0.18
PACSIN3-201ENST00000298838 IGHV1-58A0A0C4DH39 117 aa13.94□□□□□ -0.18
PACSIN3-201ENST00000298838 IBA57-AS1B1ANH7 110 aa13.94□□□□□ -0.18
PACSIN3-201ENST00000298838 SMIM1B2RUZ4 78 aa13.94□□□□□ -0.18
PACSIN3-201ENST00000298838 COX8AP10176 69 aa13.94□□□□□ -0.18
PACSIN3-201ENST00000298838 CASC10Q5T4H9 136 aa13.94□□□□□ -0.18
PACSIN3-201ENST00000298838 C5orf38Q86SI9 138 aa13.94□□□□□ -0.18
PACSIN3-201ENST00000298838 C3orf84H3BNL1 204 aa13.93□□□□□ -0.18
PACSIN3-201ENST00000298838 LEPROTO15243 131 aa13.93□□□□□ -0.18
PACSIN3-201ENST00000298838 GAGE12HA6NDE8 117 aa13.92□□□□□ -0.18
PACSIN3-201ENST00000298838 COX7A2LO14548 114 aa13.92□□□□□ -0.18
PACSIN3-201ENST00000298838 PCP2Q8IVA1 136 aa13.92□□□□□ -0.18
PACSIN3-201ENST00000298838 PLEKHB2Q96CS7 222 aa13.92□□□□□ -0.18
PACSIN3-201ENST00000298838 C1orf43Q9BWL3 253 aa13.92□□□□□ -0.18
PACSIN3-201ENST00000298838 FOXI1Q12951 378 aa13.92□□□□□ -0.18
PACSIN3-201ENST00000298838 Q9HAA7 133 aa13.92□□□□□ -0.18
PACSIN3-201ENST00000298838 UQCR10Q9UDW1 63 aa13.92□□□□□ -0.18
PACSIN3-201ENST00000298838 IGLV5-39A0A0G2JS06 123 aa13.91□□□□□ -0.18
PACSIN3-201ENST00000298838 J3QQQ9 107 aa13.91□□□□□ -0.18
PACSIN3-201ENST00000298838 SLC25A34Q6PIV7 304 aa13.91□□□□□ -0.18
PACSIN3-201ENST00000298838 LGALS3P17931 250 aaKnown RBP13.9□□□□□ -0.18
PACSIN3-201ENST00000298838 IGKV2D-24A0A075B6R9 120 aa13.9□□□□□ -0.18
PACSIN3-201ENST00000298838 TSPEAR-AS2P59090 65 aa13.9□□□□□ -0.18
PACSIN3-201ENST00000298838 LINC01561Q8N1V8 128 aa13.9□□□□□ -0.18
PACSIN3-201ENST00000298838 MIEN1Q9BRT3 115 aa13.9□□□□□ -0.18
PACSIN3-201ENST00000298838 TTTY13Q9BZ97 58 aa13.9□□□□□ -0.18
PACSIN3-201ENST00000298838 MALP21145 153 aa13.89□□□□□ -0.19
PACSIN3-201ENST00000298838 BOD1L2Q8IYS8 172 aa13.89□□□□□ -0.19
PACSIN3-201ENST00000298838 TTC32Q5I0X7 151 aa13.88□□□□□ -0.19
PACSIN3-201ENST00000298838 RMI2Q96E14 147 aa13.87□□□□□ -0.19
PACSIN3-201ENST00000298838 KRTAP1-5Q9BYS1 174 aa13.87□□□□□ -0.19
PACSIN3-201ENST00000298838 TP73-AS1Q9UF72 201 aa13.87□□□□□ -0.19
PACSIN3-201ENST00000298838 DLEU1O43261 78 aa13.87□□□□□ -0.19
PACSIN3-201ENST00000298838 KRTAP26-1Q6PEX3 210 aa13.87□□□□□ -0.19
PACSIN3-201ENST00000298838 ZNF815PA8K554 130 aa13.86□□□□□ -0.19
PACSIN3-201ENST00000298838 MYMXA0A1B0GTQ4 84 aa13.85□□□□□ -0.19
PACSIN3-201ENST00000298838 PCP4L1A6NKN8 68 aa13.85□□□□□ -0.19
PACSIN3-201ENST00000298838 MAPKAPK5-AS1Q8N8E1 139 aa13.85□□□□□ -0.19
PACSIN3-201ENST00000298838 NBDYA0A0U1RRE5 68 aa13.85□□□□□ -0.19
PACSIN3-201ENST00000298838 APOMO95445 188 aa13.85□□□□□ -0.19
PACSIN3-201ENST00000298838 COX7B2Q8TF08 81 aa13.84□□□□□ -0.19
PACSIN3-201ENST00000298838 TOMM7Q9P0U1 55 aa13.84□□□□□ -0.19
PACSIN3-201ENST00000298838 DDTP30046 118 aa13.83□□□□□ -0.2
PACSIN3-201ENST00000298838 NDUFA12Q9UI09 145 aa13.83□□□□□ -0.2
PACSIN3-201ENST00000298838 ORAOV1Q8WV07 137 aa13.83□□□□□ -0.2
PACSIN3-201ENST00000298838 COX11Q9Y6N1 276 aa13.82□□□□□ -0.2
PACSIN3-201ENST00000298838 DNAH1Q9P2D7 4330 aa13.82□□□□□ -0.2
PACSIN3-201ENST00000298838 HNRNPA3P51991 378 aaKnown RBP13.81□□□□□ -0.2
PACSIN3-201ENST00000298838 PRSS2P07478 247 aa13.8□□□□□ -0.2
PACSIN3-201ENST00000298838 Q8IZM0 81 aa13.8□□□□□ -0.2
PACSIN3-201ENST00000298838 LY6G6CO95867 125 aa13.8□□□□□ -0.2
PACSIN3-201ENST00000298838 SCGB1D4Q6XE38 83 aa13.8□□□□□ -0.2
PACSIN3-201ENST00000298838 LINC00476Q8WZB0 136 aa13.8□□□□□ -0.2
PACSIN3-201ENST00000298838 NDUFA1O15239 70 aa13.79□□□□□ -0.2
PACSIN3-201ENST00000298838 TM2D2Q9BX73 214 aa13.79□□□□□ -0.2
PACSIN3-201ENST00000298838 C6orf226Q5I0X4 101 aa13.78□□□□□ -0.2
PACSIN3-201ENST00000298838 C2orf91Q6ZV80 131 aa13.78□□□□□ -0.2
PACSIN3-201ENST00000298838 CFAP161Q6P656 301 aa13.77□□□□□ -0.21
PACSIN3-201ENST00000298838 VPS13DQ5THJ4 4388 aa13.77□□□□□ -0.21
PACSIN3-201ENST00000298838 SPAG11BQ08648 103 aa13.76□□□□□ -0.21
PACSIN3-201ENST00000298838 SFTA2Q6UW10 78 aa13.76□□□□□ -0.21
PACSIN3-201ENST00000298838 ZNF625Q96I27 306 aaPredicted RBP13.76□□□□□ -0.21
PACSIN3-201ENST00000298838 KIAA0087Q14695 138 aa13.76□□□□□ -0.21
PACSIN3-201ENST00000298838 CXCL5P42830 114 aa13.75□□□□□ -0.21
PACSIN3-201ENST00000298838 HIGD1BQ9P298 99 aa13.75□□□□□ -0.21
PACSIN3-201ENST00000298838 M0R2N4 97 aa13.74□□□□□ -0.21
PACSIN3-201ENST00000298838 CKS1BP61024 79 aa13.74□□□□□ -0.21
PACSIN3-201ENST00000298838 HERV-K104P63124 156 aa13.74□□□□□ -0.21
PACSIN3-201ENST00000298838 C15orf56Q8N910 161 aa13.74□□□□□ -0.21
PACSIN3-201ENST00000298838 A0A0J9YXY3 114 aa13.74□□□□□ -0.21
PACSIN3-201ENST00000298838 PSCAO43653 123 aa13.73□□□□□ -0.21
PACSIN3-201ENST00000298838 ZNF561-AS1K7EIQ3 104 aa13.71□□□□□ -0.21
PACSIN3-201ENST00000298838 CTAG1AP78358 180 aa13.71□□□□□ -0.21
PACSIN3-201ENST00000298838 HIGD2BQ4VC39 106 aa13.71□□□□□ -0.21
PACSIN3-201ENST00000298838 Q6ZR54 194 aa13.71□□□□□ -0.21
PACSIN3-201ENST00000298838 C2orf82Q6UX34 121 aa13.71□□□□□ -0.22
PACSIN3-201ENST00000298838 GVQW2A0A096LPI5 108 aaPredicted RBP13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 216.5 ms