RNA–Protein interactions for RNA: ENST00000296129.5

CDCP1-201, Transcript of CUB domain containing protein 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CDCP1, Length 6,006 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCP1-201ENST00000296129 BRI3O95415 125 aa12.47□□□□□ -0.41
CDCP1-201ENST00000296129 HIVEP3Q5T1R4 2406 aa12.46□□□□□ -0.41
CDCP1-201ENST00000296129 C5orf47Q569G3 176 aa12.46□□□□□ -0.41
CDCP1-201ENST00000296129 RETNQ9HD89 108 aa12.46□□□□□ -0.41
CDCP1-201ENST00000296129 PRRC2AP48634 2157 aaKnown RBP12.46□□□□□ -0.42
CDCP1-201ENST00000296129 POM121L12Q8N7R1 296 aa12.46□□□□□ -0.42
CDCP1-201ENST00000296129 C16orf95Q9H693 158 aa12.45□□□□□ -0.42
CDCP1-201ENST00000296129 IGLV4-69A0A075B6H9 119 aa12.45□□□□□ -0.42
CDCP1-201ENST00000296129 C1orf158Q8N1D5 194 aa12.45□□□□□ -0.42
CDCP1-201ENST00000296129 SMIM11BQ8TCY0 68 aa12.44□□□□□ -0.42
CDCP1-201ENST00000296129 CHCHD7Q9BUK0 85 aa12.44□□□□□ -0.42
CDCP1-201ENST00000296129 M0R378 163 aa12.44□□□□□ -0.42
CDCP1-201ENST00000296129 ZNF580Q9UK33 172 aa12.43□□□□□ -0.42
CDCP1-201ENST00000296129 NAV3Q8IVL0 2385 aa12.43□□□□□ -0.42
CDCP1-201ENST00000296129 EML5Q05BV3 1969 aa12.43□□□□□ -0.42
CDCP1-201ENST00000296129 LINC00242Q5T6M2 205 aa12.43□□□□□ -0.42
CDCP1-201ENST00000296129 ENHOQ6UWT2 76 aa12.43□□□□□ -0.42
CDCP1-201ENST00000296129 Q8IZM0 81 aa12.43□□□□□ -0.42
CDCP1-201ENST00000296129 GOLGB1Q14789 3259 aaKnown RBP12.42□□□□□ -0.42
CDCP1-201ENST00000296129 COX8CQ7Z4L0 72 aa12.42□□□□□ -0.42
CDCP1-201ENST00000296129 COX17Q14061 63 aa12.41□□□□□ -0.42
CDCP1-201ENST00000296129 COL4A2P08572 1712 aa12.41□□□□□ -0.42
CDCP1-201ENST00000296129 RPL37AP8A6NKH3 93 aa12.41□□□□□ -0.42
CDCP1-201ENST00000296129 LST1O00453 97 aa12.41□□□□□ -0.42
CDCP1-201ENST00000296129 Q6ZQY7 126 aa12.4□□□□□ -0.42
CDCP1-201ENST00000296129 COX6A2Q02221 97 aa12.4□□□□□ -0.42
CDCP1-201ENST00000296129 NDUFV3P56181 108 aaKnown RBP12.4□□□□□ -0.42
CDCP1-201ENST00000296129 CCKP06307 115 aa12.39□□□□□ -0.43
CDCP1-201ENST00000296129 LOC107984640A0A0U1RRK4 108 aa12.39□□□□□ -0.43
CDCP1-201ENST00000296129 CYSRT1A8MQ03 144 aa12.39□□□□□ -0.43
CDCP1-201ENST00000296129 LINC00694P0DN24 101 aa12.39□□□□□ -0.43
CDCP1-201ENST00000296129 FHL2Q14192 279 aa12.39□□□□□ -0.43
CDCP1-201ENST00000296129 IGKV4-1P06312 121 aa12.38□□□□□ -0.43
CDCP1-201ENST00000296129 PPDPFQ9H3Y8 114 aa12.38□□□□□ -0.43
CDCP1-201ENST00000296129 C3orf84H3BNL1 204 aa12.38□□□□□ -0.43
CDCP1-201ENST00000296129 J3KT08 172 aa12.38□□□□□ -0.43
CDCP1-201ENST00000296129 IGLV4-60A0A075B6I1 120 aa12.37□□□□□ -0.43
CDCP1-201ENST00000296129 SMIM1B2RUZ4 78 aa12.37□□□□□ -0.43
CDCP1-201ENST00000296129 ATP5EP2Q5VTU8 51 aa12.37□□□□□ -0.43
CDCP1-201ENST00000296129 Q6ZSN1 163 aa12.37□□□□□ -0.43
CDCP1-201ENST00000296129 SONP18583 2426 aaKnown RBP12.37□□□□□ -0.43
CDCP1-201ENST00000296129 DHRS4-AS1Q9P1J3 65 aa12.36□□□□□ -0.43
CDCP1-201ENST00000296129 TSPEAR-AS2P59090 65 aa12.36□□□□□ -0.43
CDCP1-201ENST00000296129 ZNF73O43830 326 aaPredicted RBP12.35□□□□□ -0.43
CDCP1-201ENST00000296129 WDR87Q6ZQQ6 2873 aa12.35□□□□□ -0.43
CDCP1-201ENST00000296129 LY6G6CO95867 125 aa12.35□□□□□ -0.43
CDCP1-201ENST00000296129 C7orf33Q8WU49 177 aa12.35□□□□□ -0.43
CDCP1-201ENST00000296129 CCDC168Q8NDH2 2452 aa12.35□□□□□ -0.43
CDCP1-201ENST00000296129 UNQ6190/PRO20217Q6UXQ8 127 aa12.34□□□□□ -0.43
CDCP1-201ENST00000296129 C9orf116Q5BN46 136 aaPredicted RBP12.34□□□□□ -0.43
CDCP1-201ENST00000296129 A0A096LNJ9 63 aa12.33□□□□□ -0.44
CDCP1-201ENST00000296129 C20orf197Q8N268 126 aa12.33□□□□□ -0.44
CDCP1-201ENST00000296129 PIEZO1Q92508 2521 aa12.33□□□□□ -0.44
CDCP1-201ENST00000296129 Q6ZTC4 211 aa12.32□□□□□ -0.44
CDCP1-201ENST00000296129 WFDC10BQ8IUB3 73 aa12.32□□□□□ -0.44
CDCP1-201ENST00000296129 BEAN1Q3B7T3 259 aa12.32□□□□□ -0.44
CDCP1-201ENST00000296129 AMELXQ99217 191 aa12.31□□□□□ -0.44
CDCP1-201ENST00000296129 SORL1Q92673 2214 aa12.31□□□□□ -0.44
CDCP1-201ENST00000296129 MUC7Q8TAX7 377 aa12.3□□□□□ -0.44
CDCP1-201ENST00000296129 HRCT1Q6UXD1 115 aa12.29□□□□□ -0.44
CDCP1-201ENST00000296129 PLAC8L1A1L4L8 177 aa12.29□□□□□ -0.44
CDCP1-201ENST00000296129 UQCRQO14949 82 aa12.29□□□□□ -0.44
CDCP1-201ENST00000296129 ZNF706Q9Y5V0 76 aaPredicted RBP12.27□□□□□ -0.44
CDCP1-201ENST00000296129 ADAMTSL4-AS1Q5T5F5 129 aa12.27□□□□□ -0.45
CDCP1-201ENST00000296129 CSDC2Q9Y534 153 aaKnown RBP12.27□□□□□ -0.45
CDCP1-201ENST00000296129 TLN1Q9Y490 2541 aaKnown RBP12.26□□□□□ -0.45
CDCP1-201ENST00000296129 EGFEM1PQ0D2K5 195 aa12.26□□□□□ -0.45
CDCP1-201ENST00000296129 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP12.26□□□□□ -0.45
CDCP1-201ENST00000296129 PRR3P79522 188 aaKnown RBP12.26□□□□□ -0.45
CDCP1-201ENST00000296129 C3orf22Q8N5N4 141 aa12.25□□□□□ -0.45
CDCP1-201ENST00000296129 IGLV9-49A0A0B4J1Y8 123 aa12.24□□□□□ -0.45
CDCP1-201ENST00000296129 NUPR2A6NF83 97 aa12.24□□□□□ -0.45
CDCP1-201ENST00000296129 Q8N2B8 174 aa12.24□□□□□ -0.45
CDCP1-201ENST00000296129 LINC00474Q9P2X8 69 aa12.24□□□□□ -0.45
CDCP1-201ENST00000296129 TRBV10-3A0A0K0K1G6 114 aa12.24□□□□□ -0.45
CDCP1-201ENST00000296129 M0QXV9 152 aa12.23□□□□□ -0.45
CDCP1-201ENST00000296129 SPINK6Q6UWN8 80 aa12.23□□□□□ -0.45
CDCP1-201ENST00000296129 C6orf223Q8N319 242 aa12.23□□□□□ -0.45
CDCP1-201ENST00000296129 USP17L23D6RBM5 183 aa12.22□□□□□ -0.45
CDCP1-201ENST00000296129 ABCA2Q9BZC7 2435 aa12.21□□□□□ -0.45
CDCP1-201ENST00000296129 A0A087WYN8 130 aa12.21□□□□□ -0.45
CDCP1-201ENST00000296129 WFDC13Q8IUB5 93 aa12.21□□□□□ -0.45
CDCP1-201ENST00000296129 FAM236DA0A1B0GTK5 79 aa12.21□□□□□ -0.46
CDCP1-201ENST00000296129 FAM236CP0DP71 79 aa12.21□□□□□ -0.46
CDCP1-201ENST00000296129 RPL28P46779 137 aaKnown RBP12.2□□□□□ -0.46
CDCP1-201ENST00000296129 Q8N814 137 aa12.2□□□□□ -0.46
CDCP1-201ENST00000296129 LYPD5Q6UWN5 251 aa12.2□□□□□ -0.46
CDCP1-201ENST00000296129 KIF25-AS1Q9Y6Z4 181 aa12.2□□□□□ -0.46
CDCP1-201ENST00000296129 XGP55808 180 aa12.2□□□□□ -0.46
CDCP1-201ENST00000296129 NDUFC2O95298 119 aa12.19□□□□□ -0.46
CDCP1-201ENST00000296129 CENPFP49454 3210 aa12.19□□□□□ -0.46
CDCP1-201ENST00000296129 A0A1B0GUV1 79 aa12.19□□□□□ -0.46
CDCP1-201ENST00000296129 C11orf72Q8NBR9 251 aa12.19□□□□□ -0.46
CDCP1-201ENST00000296129 CASC2Q6XLA1 102 aa12.18□□□□□ -0.46
CDCP1-201ENST00000296129 IMUPQ9GZP8 106 aa12.18□□□□□ -0.46
CDCP1-201ENST00000296129 SEC61GP60059 68 aa12.17□□□□□ -0.46
CDCP1-201ENST00000296129 TET2Q6N021 2002 aaPredicted RBP12.17□□□□□ -0.46
CDCP1-201ENST00000296129 REG3GQ6UW15 175 aa12.17□□□□□ -0.46
CDCP1-201ENST00000296129 NTM-AS1Q6ZSK4 140 aa12.17□□□□□ -0.46
CDCP1-201ENST00000296129 SNURFQ9Y675 71 aa12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 59.5 ms